ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet61h09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479703.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1677 Score = 228 bits (115), Expect = 8e-57 Identities = 178/199 (89%) Strand = Plus / Plus Query: 105 atggagtgcgagcccgaggagctgcagttcctgggccccgtcggcatctaccgggagtcg 164 |||||||||||||| ||||||||||| ||||||||| || || |||||| ||||| || Sbjct: 252 atggagtgcgagccggaggagctgcaattcctgggcatggtgggtatctacagggaggcg 311 Query: 165 gtggccatcctgcgcgcacaccgcccgctctacgcccgcatcgccgccgccttcgtcctc 224 | | ||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 312 gcgtccatcctgcgcgcccaccggccgctcttcgcccgcatcgccgccgccttcgtcctc 371 Query: 225 ccgctctccgcgctcttcctcgcccacatcgccatctcccacgccctcttctccaccatc 284 ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 372 ccgctctccctcctcttcctcctccacatcgccatctcccacgccctcttctcccacatc 431 Query: 285 gactccgacgactccgccc 303 ||||||||||||||||||| Sbjct: 432 gactccgacgactccgccc 450
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 228 bits (115), Expect = 8e-57 Identities = 178/199 (89%) Strand = Plus / Minus Query: 105 atggagtgcgagcccgaggagctgcagttcctgggccccgtcggcatctaccgggagtcg 164 |||||||||||||| ||||||||||| ||||||||| || || |||||| ||||| || Sbjct: 347213 atggagtgcgagccggaggagctgcaattcctgggcatggtgggtatctacagggaggcg 347154 Query: 165 gtggccatcctgcgcgcacaccgcccgctctacgcccgcatcgccgccgccttcgtcctc 224 | | ||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 347153 gcgtccatcctgcgcgcccaccggccgctcttcgcccgcatcgccgccgccttcgtcctc 347094 Query: 225 ccgctctccgcgctcttcctcgcccacatcgccatctcccacgccctcttctccaccatc 284 ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 347093 ccgctctccctcctcttcctcctccacatcgccatctcccacgccctcttctcccacatc 347034 Query: 285 gactccgacgactccgccc 303 ||||||||||||||||||| Sbjct: 347033 gactccgacgactccgccc 347015
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 228 bits (115), Expect = 8e-57 Identities = 178/199 (89%) Strand = Plus / Minus Query: 105 atggagtgcgagcccgaggagctgcagttcctgggccccgtcggcatctaccgggagtcg 164 |||||||||||||| ||||||||||| ||||||||| || || |||||| ||||| || Sbjct: 56727 atggagtgcgagccggaggagctgcaattcctgggcatggtgggtatctacagggaggcg 56668 Query: 165 gtggccatcctgcgcgcacaccgcccgctctacgcccgcatcgccgccgccttcgtcctc 224 | | ||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 56667 gcgtccatcctgcgcgcccaccggccgctcttcgcccgcatcgccgccgccttcgtcctc 56608 Query: 225 ccgctctccgcgctcttcctcgcccacatcgccatctcccacgccctcttctccaccatc 284 ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 56607 ccgctctccctcctcttcctcctccacatcgccatctcccacgccctcttctcccacatc 56548 Query: 285 gactccgacgactccgccc 303 ||||||||||||||||||| Sbjct: 56547 gactccgacgactccgccc 56529
>dbj|AK065087.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L19, full insert sequence Length = 1677 Score = 228 bits (115), Expect = 8e-57 Identities = 178/199 (89%) Strand = Plus / Plus Query: 105 atggagtgcgagcccgaggagctgcagttcctgggccccgtcggcatctaccgggagtcg 164 |||||||||||||| ||||||||||| ||||||||| || || |||||| ||||| || Sbjct: 252 atggagtgcgagccggaggagctgcaattcctgggcatggtgggtatctacagggaggcg 311 Query: 165 gtggccatcctgcgcgcacaccgcccgctctacgcccgcatcgccgccgccttcgtcctc 224 | | ||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 312 gcgtccatcctgcgcgcccaccggccgctcttcgcccgcatcgccgccgccttcgtcctc 371 Query: 225 ccgctctccgcgctcttcctcgcccacatcgccatctcccacgccctcttctccaccatc 284 ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 372 ccgctctccctcctcttcctcctccacatcgccatctcccacgccctcttctcccacatc 431 Query: 285 gactccgacgactccgccc 303 ||||||||||||||||||| Sbjct: 432 gactccgacgactccgccc 450
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 186 bits (94), Expect = 3e-44 Identities = 174/199 (87%), Gaps = 5/199 (2%) Strand = Plus / Minus Query: 105 atggagtgcgagcccgaggagctgcagttcctgggccccgtcggcatctaccgggagtcg 164 |||||||||||||| ||||||||||||||||||||| || || |||||| ||||| || Sbjct: 456073 atggagtgcgagccggaggagctgcagttcctgggcgtggtggggatctacagggaggcg 456014 Query: 165 gtggccatcctgcgcgcacaccgcccgctctacgcccgcatcgccgccgccttcgtcctc 224 | | ||||||||||||| ||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 456013 gcgtccatcctgcgcgcccaccggccgctcttcgcccgcatcgccgccaccttcgtcctc 455954 Query: 225 ccgctctccgcgctcttcctcgcccacatcgccatctcccacgccctcttctccaccatc 284 | ||||||| |||||||||| |||||||| |||||||||||||||| ||| |||| Sbjct: 455953 ctgctctccctcctcttcctcgtccacatcgacatctcccacgccctc----cca-catc 455899 Query: 285 gactccgacgactccgccc 303 ||||||||||||||||||| Sbjct: 455898 gactccgacgactccgccc 455880
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 186 bits (94), Expect = 3e-44 Identities = 174/199 (87%), Gaps = 5/199 (2%) Strand = Plus / Minus Query: 105 atggagtgcgagcccgaggagctgcagttcctgggccccgtcggcatctaccgggagtcg 164 |||||||||||||| ||||||||||||||||||||| || || |||||| ||||| || Sbjct: 456073 atggagtgcgagccggaggagctgcagttcctgggcgtggtggggatctacagggaggcg 456014 Query: 165 gtggccatcctgcgcgcacaccgcccgctctacgcccgcatcgccgccgccttcgtcctc 224 | | ||||||||||||| ||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 456013 gcgtccatcctgcgcgcccaccggccgctcttcgcccgcatcgccgccaccttcgtcctc 455954 Query: 225 ccgctctccgcgctcttcctcgcccacatcgccatctcccacgccctcttctccaccatc 284 | ||||||| |||||||||| |||||||| |||||||||||||||| ||| |||| Sbjct: 455953 ctgctctccctcctcttcctcgtccacatcgacatctcccacgccctc----cca-catc 455899 Query: 285 gactccgacgactccgccc 303 ||||||||||||||||||| Sbjct: 455898 gactccgacgactccgccc 455880
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 186 bits (94), Expect = 3e-44 Identities = 174/199 (87%), Gaps = 5/199 (2%) Strand = Plus / Plus Query: 105 atggagtgcgagcccgaggagctgcagttcctgggccccgtcggcatctaccgggagtcg 164 |||||||||||||| ||||||||||||||||||||| || || |||||| ||||| || Sbjct: 90699 atggagtgcgagccggaggagctgcagttcctgggcgtggtggggatctacagggaggcg 90758 Query: 165 gtggccatcctgcgcgcacaccgcccgctctacgcccgcatcgccgccgccttcgtcctc 224 | | ||||||||||||| ||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 90759 gcgtccatcctgcgcgcccaccggccgctcttcgcccgcatcgccgccaccttcgtcctc 90818 Query: 225 ccgctctccgcgctcttcctcgcccacatcgccatctcccacgccctcttctccaccatc 284 | ||||||| |||||||||| |||||||| |||||||||||||||| ||| |||| Sbjct: 90819 ctgctctccctcctcttcctcgtccacatcgacatctcccacgccctc----cca-catc 90873 Query: 285 gactccgacgactccgccc 303 ||||||||||||||||||| Sbjct: 90874 gactccgacgactccgccc 90892
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 178 bits (90), Expect = 7e-42 Identities = 173/199 (86%), Gaps = 5/199 (2%) Strand = Plus / Minus Query: 105 atggagtgcgagcccgaggagctgcagttcctgggccccgtcggcatctaccgggagtcg 164 ||||| |||||||| ||||||||||||||||||||| || || |||||| ||||| || Sbjct: 409804 atggaatgcgagccggaggagctgcagttcctgggcgtggtggggatctacagggaggcg 409745 Query: 165 gtggccatcctgcgcgcacaccgcccgctctacgcccgcatcgccgccgccttcgtcctc 224 | ||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 409744 gcatccatcctgcgcgcccaccggccgctctttgcccgcatcgccgccaccttcgtcctc 409685 Query: 225 ccgctctccgcgctcttcctcgcccacatcgccatctcccacgccctcttctccaccatc 284 ||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 409684 ccgctctccctcctcttcctcgtccacatcgccatctcccacgccctc----cca-catc 409630 Query: 285 gactccgacgactccgccc 303 ||||||||||||||||||| Sbjct: 409629 gactccgacgactccgccc 409611
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 178 bits (90), Expect = 7e-42 Identities = 173/199 (86%), Gaps = 5/199 (2%) Strand = Plus / Minus Query: 105 atggagtgcgagcccgaggagctgcagttcctgggccccgtcggcatctaccgggagtcg 164 ||||| |||||||| ||||||||||||||||||||| || || |||||| ||||| || Sbjct: 409804 atggaatgcgagccggaggagctgcagttcctgggcgtggtggggatctacagggaggcg 409745 Query: 165 gtggccatcctgcgcgcacaccgcccgctctacgcccgcatcgccgccgccttcgtcctc 224 | ||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 409744 gcatccatcctgcgcgcccaccggccgctctttgcccgcatcgccgccaccttcgtcctc 409685 Query: 225 ccgctctccgcgctcttcctcgcccacatcgccatctcccacgccctcttctccaccatc 284 ||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 409684 ccgctctccctcctcttcctcgtccacatcgccatctcccacgccctc----cca-catc 409630 Query: 285 gactccgacgactccgccc 303 ||||||||||||||||||| Sbjct: 409629 gactccgacgactccgccc 409611
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 178 bits (90), Expect = 7e-42 Identities = 173/199 (86%), Gaps = 5/199 (2%) Strand = Plus / Minus Query: 105 atggagtgcgagcccgaggagctgcagttcctgggccccgtcggcatctaccgggagtcg 164 ||||| |||||||| ||||||||||||||||||||| || || |||||| ||||| || Sbjct: 117122 atggaatgcgagccggaggagctgcagttcctgggcgtggtggggatctacagggaggcg 117063 Query: 165 gtggccatcctgcgcgcacaccgcccgctctacgcccgcatcgccgccgccttcgtcctc 224 | ||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 117062 gcatccatcctgcgcgcccaccggccgctctttgcccgcatcgccgccaccttcgtcctc 117003 Query: 225 ccgctctccgcgctcttcctcgcccacatcgccatctcccacgccctcttctccaccatc 284 ||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 117002 ccgctctccctcctcttcctcgtccacatcgccatctcccacgccctc----cca-catc 116948 Query: 285 gactccgacgactccgccc 303 ||||||||||||||||||| Sbjct: 116947 gactccgacgactccgccc 116929
>ref|XM_473969.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Minus Query: 197 cgcccgcatcgccgccgccttcgtcctcccgctctccgcgctcttcctcgcccacatcgc 256 ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 423 cgcccgcatcgccgccgccttcgtcctcccgctcttcctcctcttcctcgtccacatcgc 364 Query: 257 catctcccacgccctcttctccaccatcgactccgacgactccgcc 302 |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 363 catctcccacgccctcttctcccacatcgactccgacgactccgcc 318
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 197 cgcccgcatcgccgccgccttcgtcctcccgctctccgcgctcttcctcgcccacatcgc 256 ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 58350 cgcccgcatcgccgccgccttcgtcctcccgctcttcctcctcttcctcgtccacatcgc 58409 Query: 257 catctcccacgccctcttctccaccatcgactccgacgactccgcc 302 |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 58410 catctcccacgccctcttctcccacatcgactccgacgactccgcc 58455
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 197 cgcccgcatcgccgccgccttcgtcctcccgctctccgcgctcttcctcgcccacatcgc 256 ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 31885484 cgcccgcatcgccgccgccttcgtcctcccgctcttcctcctcttcctcgtccacatcgc 31885543 Query: 257 catctcccacgccctcttctccaccatcgactccgacgactccgcc 302 |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 31885544 catctcccacgccctcttctcccacatcgactccgacgactccgcc 31885589 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 243 ctcgcccacatcgccatctcccacgccctcttct 276 ||||| ||||||||||||||||||||| |||||| Sbjct: 18079515 ctcgctcacatcgccatctcccacgccttcttct 18079548 Score = 42.1 bits (21), Expect = 1.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 202 gcatcgccgccgccttcgtcctcccgctctccgcgctcttc 242 |||||||||||| ||||||| ||| |||| |||||||||| Sbjct: 22955719 gcatcgccgccggcttcgtcgtcctcctcttcgcgctcttc 22955679
>dbj|AK101027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F02, full insert sequence Length = 3504 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 197 cgcccgcatcgccgccgccttcgtcctcccgctctccgcgctcttcctcgcccacatcgc 256 ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 2561 cgcccgcatcgccgccgccttcgtcctcccgctcttcctcctcttcctcgtccacatcgc 2620 Query: 257 catctcccacgccctcttctccaccatcgactccgacgactccgcc 302 |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2621 catctcccacgccctcttctcccacatcgactccgacgactccgcc 2666
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence Length = 64224 Score = 135 bits (68), Expect = 9e-29 Identities = 95/104 (91%) Strand = Plus / Plus Query: 197 cgcccgcatcgccgccgccttcgtcctcccgctctccgcgctcttcctcgcccacatcgc 256 ||||||||||||||||||||||||||||||||||| | |||||||||| |||||| || Sbjct: 46599 cgcccgcatcgccgccgccttcgtcctcccgctcttcctcctcttcctcgtccacattgc 46658 Query: 257 catctcccacgccctcttctccaccatcgactccgacgactccg 300 ||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 46659 catctcccatgccctcttctcccacatcgactccgacgactccg 46702
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 127 bits (64), Expect = 2e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 184 accgcccgctctacgcccgcatcgccgccgccttcgtcctcccgctctccgcgctcttcc 243 ||||||| |||| |||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 29520558 accgccctctcttcgcccgcatcgccgccaccttcgtcctcccgctctccctcctcttcc 29520617 Query: 244 tcgcccacatcgccatctcccacgccctcttctccaccatcgactccg 291 || ||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 29520618 tcatccacatcgccatctcccacaccctcttctcccacatcgactccg 29520665 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ccgctctccgcgctcttcctcgcc 248 |||||||||||||||||| ||||| Sbjct: 30413339 ccgctctccgcgctcttcgtcgcc 30413316
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 127 bits (64), Expect = 2e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 184 accgcccgctctacgcccgcatcgccgccgccttcgtcctcccgctctccgcgctcttcc 243 ||||||| |||| |||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 115588 accgccctctcttcgcccgcatcgccgccaccttcgtcctcccgctctccctcctcttcc 115647 Query: 244 tcgcccacatcgccatctcccacgccctcttctccaccatcgactccg 291 || ||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 115648 tcatccacatcgccatctcccacaccctcttctcccacatcgactccg 115695
>dbj|AK073713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063L11, full insert sequence Length = 1145 Score = 127 bits (64), Expect = 2e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 184 accgcccgctctacgcccgcatcgccgccgccttcgtcctcccgctctccgcgctcttcc 243 ||||||| |||| |||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 392 accgccctctcttcgcccgcatcgccgccaccttcgtcctcccgctctccctcctcttcc 333 Query: 244 tcgcccacatcgccatctcccacgccctcttctccaccatcgactccg 291 || ||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 332 tcatccacatcgccatctcccacaccctcttctcccacatcgactccg 285
>ref|XM_468796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1035 Score = 121 bits (61), Expect = 1e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 211 ccgccttcgtcctcccgctctccgcgctcttcctcgcccacatcgccatctcccacgccc 270 ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 695 ccgccttcgtcctcctgctctcccttctcttcctcgtccacatcgccatctcccacgccc 754 Query: 271 tcttctccaccatcgactccgacgactcc 299 |||||||| ||||||||||||| |||||| Sbjct: 755 tcttctcccccatcgactccgatgactcc 783
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete sequence Length = 115815 Score = 121 bits (61), Expect = 1e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 211 ccgccttcgtcctcccgctctccgcgctcttcctcgcccacatcgccatctcccacgccc 270 ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 112195 ccgccttcgtcctcctgctctcccttctcttcctcgtccacatcgccatctcccacgccc 112254 Query: 271 tcttctccaccatcgactccgacgactcc 299 |||||||| ||||||||||||| |||||| Sbjct: 112255 tcttctcccccatcgactccgatgactcc 112283
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 121 bits (61), Expect = 1e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 211 ccgccttcgtcctcccgctctccgcgctcttcctcgcccacatcgccatctcccacgccc 270 ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 17779920 ccgccttcgtcctcctgctctcccttctcttcctcgtccacatcgccatctcccacgccc 17779861 Query: 271 tcttctccaccatcgactccgacgactcc 299 |||||||| ||||||||||||| |||||| Sbjct: 17779860 tcttctcccccatcgactccgatgactcc 17779832 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctctacgcccgcatcgccgccgcc 215 |||||||||||||||||| ||||| Sbjct: 10124576 ctctacgcccgcatcgcctccgcc 10124599
>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete sequence Length = 136916 Score = 121 bits (61), Expect = 1e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 211 ccgccttcgtcctcccgctctccgcgctcttcctcgcccacatcgccatctcccacgccc 270 ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 4087 ccgccttcgtcctcctgctctcccttctcttcctcgtccacatcgccatctcccacgccc 4146 Query: 271 tcttctccaccatcgactccgacgactcc 299 |||||||| ||||||||||||| |||||| Sbjct: 4147 tcttctcccccatcgactccgatgactcc 4175
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 121 bits (61), Expect = 1e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 211 ccgccttcgtcctcccgctctccgcgctcttcctcgcccacatcgccatctcccacgccc 270 ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 17773461 ccgccttcgtcctcctgctctcccttctcttcctcgtccacatcgccatctcccacgccc 17773402 Query: 271 tcttctccaccatcgactccgacgactcc 299 |||||||| ||||||||||||| |||||| Sbjct: 17773401 tcttctcccccatcgactccgatgactcc 17773373 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctctacgcccgcatcgccgccgcc 215 |||||||||||||||||| ||||| Sbjct: 10122697 ctctacgcccgcatcgcctccgcc 10122720
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 111 bits (56), Expect = 1e-21 Identities = 105/122 (86%), Gaps = 7/122 (5%) Strand = Plus / Plus Query: 189 ccgctctacgcccgcatcgccgccgccttcgtcctcccgctctccgcgctcttcctcgcc 248 ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| || | Sbjct: 7482651 ccgctcttcgcccgcattgccgccgccttcgtcctcccgctctccctcctcttccacgtc 7482710 Query: 249 cacatcg-------ccatctcccacgccctcttctccaccatcgactccgacgactccgc 301 ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 7482711 cacatcggacatcgccatctcccacgccctcttctcccacatcgactctgacgactccgc 7482770 Query: 302 cc 303 || Sbjct: 7482771 cc 7482772 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 catcgccgccgccttcgtcct 223 ||||||||||||||||||||| Sbjct: 16626460 catcgccgccgccttcgtcct 16626480
>dbj|AP005837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0024K20 Length = 165041 Score = 111 bits (56), Expect = 1e-21 Identities = 105/122 (86%), Gaps = 7/122 (5%) Strand = Plus / Plus Query: 189 ccgctctacgcccgcatcgccgccgccttcgtcctcccgctctccgcgctcttcctcgcc 248 ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| || | Sbjct: 86455 ccgctcttcgcccgcattgccgccgccttcgtcctcccgctctccctcctcttccacgtc 86514 Query: 249 cacatcg-------ccatctcccacgccctcttctccaccatcgactccgacgactccgc 301 ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 86515 cacatcggacatcgccatctcccacgccctcttctcccacatcgactctgacgactccgc 86574 Query: 302 cc 303 || Sbjct: 86575 cc 86576
>emb|AL663016.5|OSJN00216 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A22, complete sequence Length = 131489 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 243 ctcgcccacatcgccatctcccacgccctcttct 276 ||||| ||||||||||||||||||||| |||||| Sbjct: 42399 ctcgctcacatcgccatctcccacgccttcttct 42432
>ref|XM_610176.2| PREDICTED: Bos taurus similar to ER lumen protein retaining receptor 2 (KDEL receptor 2) (KDEL endoplasmic reticulum protein retention receptor 2) (LOC531676), mRNA Length = 2715 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 456 catctacctggagtcggtggccatcctgc 484
>ref|XM_870506.1| PREDICTED: Bos taurus similar to KDEL endoplasmic reticulum protein retention receptor 1 (LOC618184), mRNA Length = 1059 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 455 catctacctggagtcggtggccatcctgc 483
>gb|BC058065.1| Danio rerio KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, mRNA (cDNA clone MGC:63777 IMAGE:2643069), complete cds Length = 2252 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 486 catctacctggagtcggtggccatcctgc 514
>emb|CR392027.16| Zebrafish DNA sequence from clone CH211-139G16 in linkage group 3, complete sequence Length = 110726 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 59411 catctacctggagtcggtggccatcctgc 59439
>gb|BC056773.1| Danio rerio KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, mRNA (cDNA clone MGC:63501 IMAGE:2640705), complete cds Length = 2239 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 451 catctacctggagtcggtggccatcctgc 479
>ref|XM_697109.1| PREDICTED: Danio rerio hypothetical protein LOC555083 (LOC555083), mRNA Length = 2230 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 484 catctacctggagtcggtggccatcctgc 512
>gb|BC105537.1| Bos taurus cDNA clone MGC:128955 IMAGE:8120648, complete cds Length = 1808 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 453 catctacctggagtcggtggccatcctgc 481
>ref|NM_200103.1| Danio rerio KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 (kdelr2), mRNA Length = 2252 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 486 catctacctggagtcggtggccatcctgc 514
>ref|NM_200640.1| Danio rerio KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 (kdelr3), mRNA Length = 1395 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 554 catctacctggagtcggtggccatcctgc 582
>gb|BC057436.1| Danio rerio KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3, mRNA (cDNA clone MGC:64171 IMAGE:6797415), complete cds Length = 1395 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 554 catctacctggagtcggtggccatcctgc 582
>emb|CR391944.10| Zebrafish DNA sequence from clone CH211-95K19 in linkage group 3, complete sequence Length = 172806 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||||||||||||||||| Sbjct: 19210 catctacctggagtcggtggccatcctgc 19238
>ref|XM_472156.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Minus Query: 249 cacatcgccatctcccacgccctcttct 276 ||||||||||||||||||||| |||||| Sbjct: 1259 cacatcgccatctcccacgccttcttct 1232
>ref|NM_187377.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 44.1 bits (22), Expect = 0.25 Identities = 28/30 (93%) Strand = Plus / Minus Query: 199 cccgcatcgccgccgccttcgtcctcccgc 228 ||||| ||||||||||| |||||||||||| Sbjct: 358 cccgcgtcgccgccgccgtcgtcctcccgc 329
>gb|AY369265.2| Burkholderia cenocepacia phage Bcep1, complete genome Length = 48177 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 160 agtcggtggccatcctgcgcgcacac 185 |||||| ||||||||||||||||||| Sbjct: 44729 agtcggcggccatcctgcgcgcacac 44754
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 278 caccatcgactccgacgactccgccc 303 |||| ||||||||||||||||||||| Sbjct: 100443 caccgtcgactccgacgactccgccc 100468
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.25 Identities = 28/30 (93%) Strand = Plus / Minus Query: 199 cccgcatcgccgccgccttcgtcctcccgc 228 ||||| ||||||||||| |||||||||||| Sbjct: 18608812 cccgcgtcgccgccgccgtcgtcctcccgc 18608783 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tcgccatctcccacgccctc 272 |||||||||||||||||||| Sbjct: 28601789 tcgccatctcccacgccctc 28601770
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 194 ctacgcccgcatcgccgccgcc 215 |||||||||||||||||||||| Sbjct: 4770151 ctacgcccgcatcgccgccgcc 4770130
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 44.1 bits (22), Expect = 0.25 Identities = 28/30 (93%) Strand = Plus / Minus Query: 199 cccgcatcgccgccgccttcgtcctcccgc 228 ||||| ||||||||||| |||||||||||| Sbjct: 33866 cccgcgtcgccgccgccgtcgtcctcccgc 33837
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 44.1 bits (22), Expect = 0.25 Identities = 28/30 (93%) Strand = Plus / Minus Query: 199 cccgcatcgccgccgccttcgtcctcccgc 228 ||||| ||||||||||| |||||||||||| Sbjct: 61354 cccgcgtcgccgccgccgtcgtcctcccgc 61325
>ref|NM_197427.1| Oryza sativa (japonica cultivar-group) putative chorismate mutase/prephenate dehydratase (OSJNBa0096G08.15), mRNA Length = 1227 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 cgccgccgccttcgtcctcccgctc 230 ||||||||||||| ||||||||||| Sbjct: 228 cgccgccgccttcttcctcccgctc 204
>ref|NM_192476.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1176 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 acgcccgcatcgccgccgcct 216 ||||||||||||||||||||| Sbjct: 276 acgcccgcatcgccgccgcct 256
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 cgccgccgccttcgtcctcccgctc 230 ||||||||||||| ||||||||||| Sbjct: 88522 cgccgccgccttcttcctcccgctc 88546
>emb|CR697039.2|CNS0G0SB Tetraodon nigroviridis full-length cDNA Length = 1117 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||| ||||||||||||| Sbjct: 179 catctacctggagtccgtggccatcctgc 207
>emb|CR693178.2|CNS0FXT2 Tetraodon nigroviridis full-length cDNA Length = 1115 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||| ||||||||||||| Sbjct: 164 catctacctggagtccgtggccatcctgc 192
>emb|CR689080.2|CNS0FUN8 Tetraodon nigroviridis full-length cDNA Length = 1121 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 149 catctaccgggagtcggtggccatcctgc 177 |||||||| |||||| ||||||||||||| Sbjct: 179 catctacctggagtccgtggccatcctgc 207
>emb|CR645974.2|CNS0EXEK Tetraodon nigroviridis full-length cDNA Length = 1394 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gcatcgccgccgccttcgtcc 222 ||||||||||||||||||||| Sbjct: 1039 gcatcgccgccgccttcgtcc 1059
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 42.1 bits (21), Expect = 1.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 202 gcatcgccgccgccttcgtcctcccgctctccgcgctcttc 242 |||||||||||| ||||||| ||| |||| |||||||||| Sbjct: 50175 gcatcgccgccggcttcgtcgtcctcctcttcgcgctcttc 50135
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 cgccgccgccttcgtcctcccgctc 230 ||||||||||||| ||||||||||| Sbjct: 19827484 cgccgccgccttcttcctcccgctc 19827508
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 cgccgccgccttcgtcctccc 226 ||||||||||||||||||||| Sbjct: 18196349 cgccgccgccttcgtcctccc 18196329 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 cgccgccgccttcgtcctccc 226 ||||||||||||||||||||| Sbjct: 18112323 cgccgccgccttcgtcctccc 18112303 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cctcccgctctccgcgctct 240 |||||||||||||||||||| Sbjct: 20969246 cctcccgctctccgcgctct 20969227
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acgcccgcatcgccgccgcct 216 ||||||||||||||||||||| Sbjct: 26906755 acgcccgcatcgccgccgcct 26906775 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 cctcaatccccaattcccca 24 |||||||||||||||||||| Sbjct: 39625393 cctcaatccccaattcccca 39625412 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ctacgcccgcatcgccgccg 213 |||||||||||||||||||| Sbjct: 6365982 ctacgcccgcatcgccgccg 6366001
>dbj|AP004364.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445H04 Length = 202821 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acgcccgcatcgccgccgcct 216 ||||||||||||||||||||| Sbjct: 88400 acgcccgcatcgccgccgcct 88420
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acgcccgcatcgccgccgcct 216 ||||||||||||||||||||| Sbjct: 142404 acgcccgcatcgccgccgcct 142424
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 ccgcatcgccgccgccttcgtcctc 224 |||||||||||||||| |||||||| Sbjct: 6248426 ccgcatcgccgccgccgtcgtcctc 6248402
>dbj|AP006553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0061G23 Length = 144220 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 cgccgccgccttcgtcctccc 226 ||||||||||||||||||||| Sbjct: 76721 cgccgccgccttcgtcctccc 76701
>dbj|AP006524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077M23 Length = 167264 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 cgccgccgccttcgtcctccc 226 ||||||||||||||||||||| Sbjct: 107973 cgccgccgccttcgtcctccc 107953
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 catcgccgccgccttcgtcct 223 ||||||||||||||||||||| Sbjct: 34599 catcgccgccgccttcgtcct 34619
>dbj|AK099858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110M24, full insert sequence Length = 1700 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 cgccgccgccttcgtcctcccgctc 230 ||||||||||||| ||||||||||| Sbjct: 347 cgccgccgccttcttcctcccgctc 323
>gb|DQ068007.1| Lachnella villosa RNA polymerase II largest subunit (RPB1) gene, partial sequence Length = 1238 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 gagcccgaggagctgcagttcctgg 138 |||||||||||||||||| |||||| Sbjct: 992 gagcccgaggagctgcaggtcctgg 968
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 cgccgccgccttcgtcctcccgctc 230 ||||||||||||| ||||||||||| Sbjct: 19838760 cgccgccgccttcttcctcccgctc 19838784
>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA Length = 1137 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ctacgcccgcatcgccgccg 213 |||||||||||||||||||| Sbjct: 1062 ctacgcccgcatcgccgccg 1081
>ref|XM_467608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2896 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ccgctctccgcgctcttcctcgcc 248 |||||||||||||||||| ||||| Sbjct: 1018 ccgctctccgcgctcttcgtcgcc 1041
>ref|XM_467607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1995 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ccgctctccgcgctcttcctcgcc 248 |||||||||||||||||| ||||| Sbjct: 848 ccgctctccgcgctcttcgtcgcc 871
>gb|AC162898.10| Mus musculus chromosome 5, clone RP23-391P21, complete sequence Length = 202279 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ccctcaatccccaattcccc 23 |||||||||||||||||||| Sbjct: 80224 ccctcaatccccaattcccc 80205
>ref|XM_479509.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1574 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tcgccatctcccacgccctc 272 |||||||||||||||||||| Sbjct: 25 tcgccatctcccacgccctc 44
>gb|BC106591.1| Xenopus laevis cDNA clone MGC:131365 IMAGE:7766758, complete cds Length = 677 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 cctcttctccaccatcgact 288 |||||||||||||||||||| Sbjct: 313 cctcttctccaccatcgact 332
>ref|XM_657744.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5232.2), mRNA Length = 705 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tctacgcccgcatcgccgcc 212 |||||||||||||||||||| Sbjct: 140 tctacgcccgcatcgccgcc 159
>ref|XM_655866.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3354.2), mRNA Length = 945 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 196 acgcccgcatcgccgccgccttcgtcct 223 ||||||||||||||| | |||||||||| Sbjct: 86 acgcccgcatcgccgtctccttcgtcct 113
>ref|XM_745949.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g11590) partial mRNA Length = 732 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tctacgcccgcatcgccgcc 212 |||||||||||||||||||| Sbjct: 185 tctacgcccgcatcgccgcc 204
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tcctcgcccacatcgccatc 260 |||||||||||||||||||| Sbjct: 5325365 tcctcgcccacatcgccatc 5325346
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cgtaagaggccatggagtgc 113 |||||||||||||||||||| Sbjct: 202306 cgtaagaggccatggagtgc 202325
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctctacgcccgcatcgccgccgcc 215 |||||||||||||||||| ||||| Sbjct: 70197 ctctacgcccgcatcgcctccgcc 70220
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 cctcaatccccaattcccca 24 |||||||||||||||||||| Sbjct: 106349 cctcaatccccaattcccca 106368
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cccgctctacgcccgcatcg 207 |||||||||||||||||||| Sbjct: 599840 cccgctctacgcccgcatcg 599821
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ctacgcccgcatcgccgccg 213 |||||||||||||||||||| Sbjct: 137048 ctacgcccgcatcgccgccg 137067
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cgcccgcatcgccgccgcct 216 |||||||||||||||||||| Sbjct: 4020868 cgcccgcatcgccgccgcct 4020849
>dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090E14 Length = 161119 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cctcccgctctccgcgctct 240 |||||||||||||||||||| Sbjct: 96170 cctcccgctctccgcgctct 96151
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tcgccatctcccacgccctc 272 |||||||||||||||||||| Sbjct: 67747 tcgccatctcccacgccctc 67728
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ccgctctccgcgctcttcctcgcc 248 |||||||||||||||||| ||||| Sbjct: 94199 ccgctctccgcgctcttcgtcgcc 94176
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ccgctctccgcgctcttcctcgcc 248 |||||||||||||||||| ||||| Sbjct: 19387 ccgctctccgcgctcttcgtcgcc 19364
>dbj|AK121610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042M19, full insert sequence Length = 1996 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ccgctctccgcgctcttcctcgcc 248 |||||||||||||||||| ||||| Sbjct: 849 ccgctctccgcgctcttcgtcgcc 872
>dbj|AK119320.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-H10, full insert sequence Length = 2896 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ccgctctccgcgctcttcctcgcc 248 |||||||||||||||||| ||||| Sbjct: 1018 ccgctctccgcgctcttcgtcgcc 1041
>dbj|AK109983.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-D10, full insert sequence Length = 1576 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tcgccatctcccacgccctc 272 |||||||||||||||||||| Sbjct: 25 tcgccatctcccacgccctc 44
>dbj|AK099139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B10, full insert sequence Length = 2263 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctctacgcccgcatcgccgccgcc 215 |||||||||||||||||| ||||| Sbjct: 1767 ctctacgcccgcatcgcctccgcc 1790
>dbj|AK070365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A10, full insert sequence Length = 2263 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctctacgcccgcatcgccgccgcc 215 |||||||||||||||||| ||||| Sbjct: 1767 ctctacgcccgcatcgcctccgcc 1790
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccagcagctccggcgt 96 |||||||||||||||||||| Sbjct: 4073604 gccgccagcagctccggcgt 4073623
>dbj|AK064880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J23, full insert sequence Length = 1747 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctctacgcccgcatcgccgccgcc 215 |||||||||||||||||| ||||| Sbjct: 1260 ctctacgcccgcatcgcctccgcc 1283
>dbj|AK061062.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A06, full insert sequence Length = 1681 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tcgccatctcccacgccctc 272 |||||||||||||||||||| Sbjct: 1044 tcgccatctcccacgccctc 1025
>dbj|AK060829.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C02, full insert sequence Length = 1189 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ctctacgcccgcatcgccgccgcc 215 |||||||||||||||||| ||||| Sbjct: 694 ctctacgcccgcatcgcctccgcc 717
>dbj|AB030939.1| Oryza sativa (japonica cultivar-group) mRNA for mitochondrial aldehyde dehydrogenase ALDH2a, complete cds Length = 1855 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ccgctctccgcgctcttcctcgcc 248 |||||||||||||||||| ||||| Sbjct: 759 ccgctctccgcgctcttcgtcgcc 782 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,078,179 Number of Sequences: 3902068 Number of extensions: 2078179 Number of successful extensions: 48853 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46996 Number of HSP's gapped (non-prelim): 1854 length of query: 303 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 281 effective length of database: 17,147,199,772 effective search space: 4818363135932 effective search space used: 4818363135932 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
