>VSX1_CHICK (Q9IAL2) Visual system homeobox 1 (Transcription factor VSX1)|
           (Homeobox protein Chx10-1)
          Length = 350

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
 Frame = +1

Query: 67  SPSP---RFQPPQAGKQEFSARIRARA----DLRGFRAALSAPCTSDPGPLGSWEGGGA 222
           +PSP   R   P+   +   A +RA+     DL G  A L  P  + PGP G +EGGGA
Sbjct: 25  APSPASVRSALPERSARPGGAGLRAKGFAITDLLGLEAELQPPPGAAPGPAGGYEGGGA 83

>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2|
          Length = 1516

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +1

Query: 88  PPQAGKQEFSARIRARADLRGFRAALSAPCTSDPGPLGSW 207
           P  +G+ + S     RA  RG R A S P TS P PLGS+
Sbjct: 744 PAPSGEPQAST---PRATGRGARKAGSEPETSRPSPLGSY 780

>IASPP_MOUSE (Q5I1X5) RelA-associated inhibitor (Inhibitor of ASPP protein)|
           (Protein iASPP) (PPP1R13B-like protein)
           (NFkB-interacting protein 1)
          Length = 824

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 221 APPPSQDPRGPGS-EVHGAERAARNPRKSARARI 123
           APP S  P  P S E+    R   +PRK+ RAR+
Sbjct: 588 APPQSSPPEQPQSMEMRSVLRKVGSPRKARRARL 621


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.134    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,846,611
Number of Sequences: 219361
Number of extensions: 544421
Number of successful extensions: 2187
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2187
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)