>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02,
             complete sequence
          Length = 99795

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                         
Query: 238   cgccgccgtcgtcgagggaggaggcggtcgcgcaggccaggtcctgcctcgccacggcgc 297
             ||||||||||||||||||||||||| ||  | ||||| ||||||||||||||| | ||||
Sbjct: 81866 cgccgccgtcgtcgagggaggaggccgtgtcccaggcgaggtcctgcctcgccgccgcgc 81807

                    
Query: 298   tgcgcaa 304
             |||||||
Sbjct: 81806 tgcgcaa 81800

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                            
Query: 238      cgccgccgtcgtcgagggaggaggcggtcgcgcaggccaggtcctgcctcgccacggcgc 297
                ||||||||||||||||||||||||| ||  | ||||| ||||||||||||||| | ||||
Sbjct: 24479193 cgccgccgtcgtcgagggaggaggccgtgtcccaggcgaggtcctgcctcgccgccgcgc 24479134

                       
Query: 298      tgcgcaa 304
                |||||||
Sbjct: 24479133 tgcgcaa 24479127

>dbj|AK110277.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-D09, full
           insert sequence
          Length = 1194

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 238 cgccgccgtcgtcgagggaggaggcggtcgcgcaggccaggtcctgcctcgccacggcgc 297
           ||||||||||||||||||||||||| ||  | ||||| ||||||||||||||| | ||||
Sbjct: 203 cgccgccgtcgtcgagggaggaggccgtgtcccaggcgaggtcctgcctcgccgccgcgc 262

                  
Query: 298 tgcgcaa 304
           |||||||
Sbjct: 263 tgcgcaa 269

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 237      acgccgccgtcgtcgagggaggag 260
                ||||||||||||||||||||||||
Sbjct: 16917893 acgccgccgtcgtcgagggaggag 16917916



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 223      cggacggctccccgacgccgccgtcgtc 250
                |||||||||| ||| |||||||||||||
Sbjct: 18921260 cggacggctcgccgccgccgccgtcgtc 18921287



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 155      tctcctcctccgcagtcgtccgcc 178
                ||||| ||||||||||||||||||
Sbjct: 18198279 tctccacctccgcagtcgtccgcc 18198256

>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0488D02
          Length = 154537

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 237   acgccgccgtcgtcgagggaggag 260
             ||||||||||||||||||||||||
Sbjct: 47706 acgccgccgtcgtcgagggaggag 47729

>ref|XM_469584.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 903

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 199 cggcagcggcaccgtctgctccgacg 224
           ||||||||||||||||| ||||||||
Sbjct: 228 cggcagcggcaccgtctcctccgacg 203

>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map
             near C10769, complete sequence
          Length = 194856

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 199   cggcagcggcaccgtctgctccgacg 224
             ||||||||||||||||| ||||||||
Sbjct: 30209 cggcagcggcaccgtctcctccgacg 30184

>gb|DQ192137.1| Streptomyces cyaneus isolate REA33 TrpB (trpB) gene, partial cds
          Length = 454

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 223 cggacggctccccgacgccgccgtcg 248
           ||||||||| ||||||||||||||||
Sbjct: 397 cggacggctgcccgacgccgccgtcg 422

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 199      cggcagcggcaccgtctgctccgacg 224
                ||||||||||||||||| ||||||||
Sbjct: 29109082 cggcagcggcaccgtctcctccgacg 29109107

>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete
             sequence
          Length = 91084

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 199   cggcagcggcaccgtctgctccgacg 224
             ||||||||||||||||| ||||||||
Sbjct: 62294 cggcagcggcaccgtctcctccgacg 62269

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 199      cggcagcggcaccgtctgctccgacg 224
                ||||||||||||||||| ||||||||
Sbjct: 29200504 cggcagcggcaccgtctcctccgacg 29200529

>dbj|AK110710.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-C12, full
           insert sequence
          Length = 997

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 199 cggcagcggcaccgtctgctccgacg 224
           ||||||||||||||||| ||||||||
Sbjct: 694 cggcagcggcaccgtctcctccgacg 719

>dbj|AK101260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032I06, full
           insert sequence
          Length = 1108

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 199 cggcagcggcaccgtctgctccgacg 224
           ||||||||||||||||| ||||||||
Sbjct: 352 cggcagcggcaccgtctcctccgacg 327

>emb|AL670008.1|NCB13O8 Neurospora crassa DNA linkage group V BAC contig B13O8
          Length = 80765

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    atcgtcttctcttggcgccaa 48
             |||||||||||||||||||||
Sbjct: 50235 atcgtcttctcttggcgccaa 50255

>gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene region, part 2 of 2
          Length = 230573

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 191   gtcctcgtcggcagcggcacc 211
             |||||||||||||||||||||
Sbjct: 15499 gtcctcgtcggcagcggcacc 15479

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 191     gtcctcgtcggcagcggcacc 211
               |||||||||||||||||||||
Sbjct: 2073984 gtcctcgtcggcagcggcacc 2073964

>ref|XM_509171.1| PREDICTED: Pan troglodytes similar to PI 3-kinase enhancer long
           isoform (LOC452023), mRNA
          Length = 3660

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 144 cgcctgcctgctctcctcctccgc 167
           |||||||| |||||||||||||||
Sbjct: 923 cgcctgccggctctcctcctccgc 946

>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09,
              complete sequence
          Length = 139468

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    acggctccccgacgccgccg 245
              ||||||||||||||||||||
Sbjct: 105496 acggctccccgacgccgccg 105477

>ref|XM_581013.2| PREDICTED: Bos taurus similar to Centaurin-gamma 1 (LOC504833),
           mRNA
          Length = 3246

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 144 cgcctgcctgctctcctcctccgc 167
           |||||||| |||||||||||||||
Sbjct: 521 cgcctgccggctctcctcctccgc 544

>gb|AY128689.1| Homo sapiens PI 3-kinase enhancer long isoform mRNA, complete cds
          Length = 3579

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 144 cgcctgcctgctctcctcctccgc 167
           |||||||| |||||||||||||||
Sbjct: 854 cgcctgccggctctcctcctccgc 877

>gb|AC025165.27| Homo sapiens 12 BAC RP11-571M6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 211544

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 144    cgcctgcctgctctcctcctccgc 167
              |||||||| |||||||||||||||
Sbjct: 131312 cgcctgccggctctcctcctccgc 131289

>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   gcggtcgcgcaggccaggtcctgc 284
             ||||||||||||| ||||||||||
Sbjct: 13475 gcggtcgcgcaggtcaggtcctgc 13498

>gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence
          Length = 165072

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   gctccccgacgccgccgtcg 248
             ||||||||||||||||||||
Sbjct: 96159 gctccccgacgccgccgtcg 96178

>gb|U81031.2|HSU81031 Homo sapiens CDK4, SAS, and KIAA0167 genes, complete cds; and OS9 gene,
             partial cds; from cosmid 6E5, complete sequence
          Length = 45998

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   cgcctgcctgctctcctcctccgc 167
             |||||||| |||||||||||||||
Sbjct: 19611 cgcctgccggctctcctcctccgc 19634

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     acggctccccgacgccgccg 245
               ||||||||||||||||||||
Sbjct: 9752971 acggctccccgacgccgccg 9752952

>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster,
             complete sequence
          Length = 123580

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 232   ccccgacgccgccgtcgtcgaggg 255
             ||||||| ||||||||||||||||
Sbjct: 12907 ccccgaccccgccgtcgtcgaggg 12930

>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0556A05
          Length = 158189

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   tctcctcctccgcagtcgtccgcc 178
             ||||| ||||||||||||||||||
Sbjct: 47003 tctccacctccgcagtcgtccgcc 46980

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     acggctccccgacgccgccg 245
               ||||||||||||||||||||
Sbjct: 9759010 acggctccccgacgccgccg 9758991

>dbj|AB066097.1| Pseudomonas sp. TK4 gene for sphingomyelinase, complete cds
          Length = 2388

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 cgacgccgccgtcgtcgagg 254
           ||||||||||||||||||||
Sbjct: 920 cgacgccgccgtcgtcgagg 901


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,276,740
Number of Sequences: 3902068
Number of extensions: 2276740
Number of successful extensions: 52528
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52001
Number of HSP's gapped (non-prelim): 527
length of query: 304
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 282
effective length of database: 17,147,199,772
effective search space: 4835510335704
effective search space used: 4835510335704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)