>ref|NM_184187.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2242

 Score =  119 bits (60), Expect = 3e-24
 Identities = 147/176 (83%)
 Strand = Plus / Plus

                                                                        
Query: 5    aactatgctatctacaagctatgatggggttatcttaaaatggatacagcgtgttggata 64
            |||||| || || ||||| || ||||| |||||| | | ||||||| || ||||||||||
Sbjct: 1098 aactatactgtccacaagttacgatggcgttatcatgagatggataaagggtgttggata 1157

                                                                        
Query: 65   tggtggcaggttgattcgtaagaacaacacccagatcaaatgctttgttgccacagaaga 124
            ||||||||| ||||| || ||||||||||||||||| |||||||||  ||   |||||||
Sbjct: 1158 tggtggcagattgatgcgaaagaacaacacccagattaaatgctttactgtagcagaaga 1217

                                                                    
Query: 125  ggagctgatcacttcagggtatgataacaaggtcttcagaattcctgtttatggag 180
            ||| ||  |||| || || |||||||||||||| |||||||||||| || ||||||
Sbjct: 1218 ggaactcgtcacctctggatatgataacaaggttttcagaattcctcttaatggag 1273

>dbj|AK121927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106G21, full
            insert sequence
          Length = 2242

 Score =  119 bits (60), Expect = 3e-24
 Identities = 147/176 (83%)
 Strand = Plus / Plus

                                                                        
Query: 5    aactatgctatctacaagctatgatggggttatcttaaaatggatacagcgtgttggata 64
            |||||| || || ||||| || ||||| |||||| | | ||||||| || ||||||||||
Sbjct: 1098 aactatactgtccacaagttacgatggcgttatcatgagatggataaagggtgttggata 1157

                                                                        
Query: 65   tggtggcaggttgattcgtaagaacaacacccagatcaaatgctttgttgccacagaaga 124
            ||||||||| ||||| || ||||||||||||||||| |||||||||  ||   |||||||
Sbjct: 1158 tggtggcagattgatgcgaaagaacaacacccagattaaatgctttactgtagcagaaga 1217

                                                                    
Query: 125  ggagctgatcacttcagggtatgataacaaggtcttcagaattcctgtttatggag 180
            ||| ||  |||| || || |||||||||||||| |||||||||||| || ||||||
Sbjct: 1218 ggaactcgtcacctctggatatgataacaaggttttcagaattcctcttaatggag 1273

>gb|BT018777.1| Zea mays clone EL01N0526B05.d mRNA sequence
          Length = 2173

 Score = 99.6 bits (50), Expect = 3e-18
 Identities = 146/178 (82%)
 Strand = Plus / Plus

                                                                        
Query: 2    aagaactatgctatctacaagctatgatggggttatcttaaaatggatacagcgtgttgg 61
            ||||||||| |||||||| ||||||||||| || ||| | |  ||||||||| |||||||
Sbjct: 1034 aagaactatactatctactagctatgatggtgtcatcatgaggtggatacagggtgttgg 1093

                                                                        
Query: 62   atatggtggcaggttgattcgtaagaacaacacccagatcaaatgctttgttgccacaga 121
            || ||||||||| ||||| || |  |||||||| || || ||||| |||| |||   |||
Sbjct: 1094 atttggtggcagattgatgcgcagaaacaacactcaaataaaatgttttgctgcagtaga 1153

                                                                      
Query: 122  agaggagctgatcacttcagggtatgataacaaggtcttcagaattcctgtttatgga 179
            ||| |||||  | || ||||| |||||||| |||||||||||||||||| || |||||
Sbjct: 1154 agaagagcttgttacctcaggttatgataataaggtcttcagaattcctcttaatgga 1211

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 127/153 (83%)
 Strand = Plus / Plus

                                                                           
Query: 5       aactatgctatctacaagctatgatggggttatcttaaaatggatacagcgtgttggata 64
               |||||| || || ||||| || ||||| |||||| | | ||||||| || ||||||||||
Sbjct: 1415496 aactatactgtccacaagttacgatggcgttatcatgagatggataaagggtgttggata 1415555

                                                                           
Query: 65      tggtggcaggttgattcgtaagaacaacacccagatcaaatgctttgttgccacagaaga 124
               ||||||||| ||||| || ||||||||||||||||| |||||||||  ||   |||||||
Sbjct: 1415556 tggtggcagattgatgcgaaagaacaacacccagattaaatgctttactgtagcagaaga 1415615

                                                
Query: 125     ggagctgatcacttcagggtatgataacaaggt 157
               ||| ||  |||| || || ||||||||||||||
Sbjct: 1415616 ggaactcgtcacctctggatatgataacaaggt 1415648

>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0037C04
          Length = 137879

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 127/153 (83%)
 Strand = Plus / Plus

                                                                          
Query: 5      aactatgctatctacaagctatgatggggttatcttaaaatggatacagcgtgttggata 64
              |||||| || || ||||| || ||||| |||||| | | ||||||| || ||||||||||
Sbjct: 113547 aactatactgtccacaagttacgatggcgttatcatgagatggataaagggtgttggata 113606

                                                                          
Query: 65     tggtggcaggttgattcgtaagaacaacacccagatcaaatgctttgttgccacagaaga 124
              ||||||||| ||||| || ||||||||||||||||| |||||||||  ||   |||||||
Sbjct: 113607 tggtggcagattgatgcgaaagaacaacacccagattaaatgctttactgtagcagaaga 113666

                                               
Query: 125    ggagctgatcacttcagggtatgataacaaggt 157
              ||| ||  |||| || || ||||||||||||||
Sbjct: 113667 ggaactcgtcacctctggatatgataacaaggt 113699

>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0044F08
          Length = 141528

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 127/153 (83%)
 Strand = Plus / Plus

                                                                         
Query: 5     aactatgctatctacaagctatgatggggttatcttaaaatggatacagcgtgttggata 64
             |||||| || || ||||| || ||||| |||||| | | ||||||| || ||||||||||
Sbjct: 65117 aactatactgtccacaagttacgatggcgttatcatgagatggataaagggtgttggata 65176

                                                                         
Query: 65    tggtggcaggttgattcgtaagaacaacacccagatcaaatgctttgttgccacagaaga 124
             ||||||||| ||||| || ||||||||||||||||| |||||||||  ||   |||||||
Sbjct: 65177 tggtggcagattgatgcgaaagaacaacacccagattaaatgctttactgtagcagaaga 65236

                                              
Query: 125   ggagctgatcacttcagggtatgataacaaggt 157
             ||| ||  |||| || || ||||||||||||||
Sbjct: 65237 ggaactcgtcacctctggatatgataacaaggt 65269

>gb|AC005740.1| Homo sapiens chromosome 5p, BAC clone 50g21 (LBNL H154), complete
             sequence
          Length = 186780

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    gtgttggatatggtggcagg 74
             ||||||||||||||||||||
Sbjct: 59435 gtgttggatatggtggcagg 59454

>gb|AC157351.11| Mus musculus chromosome 5, clone RP23-219K16, complete sequence
          Length = 196331

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   gataacaaggtcttcagaat 166
             ||||||||||||||||||||
Sbjct: 67139 gataacaaggtcttcagaat 67120

>gb|AC165274.2| Mus musculus BAC clone RP24-97D3 from chromosome 16, complete sequence
          Length = 175488

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 101    caaatgctttgttgccaca 119
              |||||||||||||||||||
Sbjct: 140411 caaatgctttgttgccaca 140393

>gb|AC136987.11| Mus musculus chromosome 16, clone RP24-129J16, complete sequence
          Length = 155372

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 101    caaatgctttgttgccaca 119
              |||||||||||||||||||
Sbjct: 154021 caaatgctttgttgccaca 154039

>gb|AC131702.3| Mus musculus BAC clone RP24-177J5 from chromosome 7, complete sequence
          Length = 154632

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   gttgccacagaagaggagc 129
             |||||||||||||||||||
Sbjct: 30593 gttgccacagaagaggagc 30575

>gb|AC114005.5| Mus musculus BAC clone RP23-179L18 from 8, complete sequence
          Length = 214732

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 109   ttgttgccacagaagagga 127
             |||||||||||||||||||
Sbjct: 21882 ttgttgccacagaagagga 21900

>ref|XM_661748.1| Cryptosporidium hominis TU502 transmembrane protein (Chro.60226)
           partial mRNA
          Length = 537

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  gttggatatggtggcaggt 75
           |||||||||||||||||||
Sbjct: 367 gttggatatggtggcaggt 385

>gb|AC139214.12| Mus musculus chromosome 17, clone RP23-345D6, complete sequence
          Length = 286283

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 94    cccagatcaaatgctttgt 112
             |||||||||||||||||||
Sbjct: 82366 cccagatcaaatgctttgt 82384

>gb|AC102609.7| Mus musculus, clone RP23-403I3, complete sequence
          Length = 208575

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 114    gccacagaagaggagctga 132
              |||||||||||||||||||
Sbjct: 174819 gccacagaagaggagctga 174801

>emb|Z75741.1|HS107N3 Human DNA sequence from clone RP1-107N3 on chromosome X Contains a
              kinesin heavy chain member 2 (KIF2) pseudogene and a
              Huntingtin interacting protein K (HYPK) pseudogene,
              complete sequence
          Length = 174045

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 34     ttatcttaaaatggataca 52
              |||||||||||||||||||
Sbjct: 120972 ttatcttaaaatggataca 120990

>emb|AL365192.22| Human DNA sequence from clone RP3-421H19 on chromosome 6 Contains the
             5' part of a novel protein similar to ribosomal protein
             L14 (L14p/L23e), a novel gene, the CAPN11 gene for calpain
             11 and one CpG island, complete sequence
          Length = 89351

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    gttggatatggtggcaggt 75
             |||||||||||||||||||
Sbjct: 76387 gttggatatggtggcaggt 76369

>emb|CR378665.1| Photobacterium profundum SS9; segment 3/12
          Length = 347213

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 161    cagaattcctgtttatgga 179
              |||||||||||||||||||
Sbjct: 254051 cagaattcctgtttatgga 254033

>gb|AC110794.3| Homo sapiens BAC clone RP11-598O12 from 4, complete sequence
          Length = 148841

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    tatcttaaaatggatacag 53
             |||||||||||||||||||
Sbjct: 37924 tatcttaaaatggatacag 37906

>gb|AF208225.1|AF208225 Emericella nidulans amylase cluster transcriptional regulator AmyR
            (amyR), alpha-glucosidase AgdA (agdA), and alpha-amylase
            AmyA (amyA) genes, complete cds
          Length = 9451

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 3    agaactatgctatctacaa 21
            |||||||||||||||||||
Sbjct: 8976 agaactatgctatctacaa 8994

>dbj|AP002370.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-160H12, complete
              sequence
          Length = 174697

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 89     caacacccagatcaaatgc 107
              |||||||||||||||||||
Sbjct: 133012 caacacccagatcaaatgc 132994

>dbj|AP002751.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-682K9, complete
             sequence
          Length = 197847

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    caacacccagatcaaatgc 107
             |||||||||||||||||||
Sbjct: 54042 caacacccagatcaaatgc 54024

>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence
          Length = 191241

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 109    ttgttgccacagaagagga 127
              |||||||||||||||||||
Sbjct: 177727 ttgttgccacagaagagga 177745

>emb|Z70042.1|HSU96H11 Human DNA sequence from clone LL0XNC01-96H11 on chromosome X,
            complete sequence
          Length = 38168

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 34   ttatcttaaaatggataca 52
            |||||||||||||||||||
Sbjct: 7553 ttatcttaaaatggataca 7535


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,729,061
Number of Sequences: 3902068
Number of extensions: 1729061
Number of successful extensions: 109204
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109124
Number of HSP's gapped (non-prelim): 75
length of query: 180
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 158
effective length of database: 17,147,199,772
effective search space: 2709257563976
effective search space used: 2709257563976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)