ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet60g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY057118.1| Triticum aestivum cold acclimation protein WCOR41... 260 2e-66
2gb|U73216.1|TAU73216 Triticum aestivum cold acclimation protein ... 174 8e-41
3gb|BT017742.1| Zea mays clone EL01N0449E04.c mRNA sequence 74 2e-10
4gb|AY181208.1| Zea mays cold acclimation protein COR413-PM1 mRNA... 74 2e-10
5gb|AY106041.1| Zea mays PCO103483 mRNA sequence 74 2e-10
6ref|XM_469914.1| Oryza sativa (japonica cultivar-group), mRNA 70 3e-09
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 70 3e-09
8gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom... 70 3e-09
9gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genom... 70 3e-09
10gb|AF283006.1| Oryza sativa (japonica cultivar-group) cold accli... 70 3e-09
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 70 3e-09
12dbj|AK060906.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 3e-09
13dbj|AK060000.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 3e-09
14dbj|AK066036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 8e-07
15emb|AL627282.1| Salmonella enterica serovar Typhi (Salmonella ty... 44 0.19
16gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 44 0.19
17ref|NM_212197.1| Eremothecium gossypii AFR514Cp (AFR514C), mRNA 44 0.19
18gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 44 0.19
19gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 0.76
20emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genom... 42 0.76
21dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.76
22dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.76
23dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.76
24dbj|AK108191.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.76
25gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 0.76
26ref|NM_183931.1| Oryza sativa (japonica cultivar-group), predic... 40 3.0
27ref|NM_192555.1| Oryza sativa (japonica cultivar-group), predic... 40 3.0
28ref|XM_470567.1| Oryza sativa (japonica cultivar-group), predic... 40 3.0
29gb|AY789642.1| Homo sapiens calpain, small subunit 1 (CAPNS1) ge... 40 3.0
30gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 3.0
31gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 3.0
32gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosom... 40 3.0
33gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 3.0
34ref|NM_001040427.1| Homo sapiens hydroxyacylglutathione hydrolas... 40 3.0
35gb|AC164874.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 3.0
36gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, comp... 40 3.0
37emb|Z35595.1|CEC01G6 Caenorhabditis elegans Cosmid C01G6, comple... 40 3.0
38ref|XM_546236.2| PREDICTED: Canis familiaris similar to Neuraliz... 40 3.0
39emb|AL031722.20|HS429E7 Human DNA sequence from clone LA16c-429E... 40 3.0
40gb|AC012180.6| Homo sapiens chromosome 16 clone RP11-31I10, comp... 40 3.0
41gb|AE008902.1| Salmonella typhimurium LT2, section 206 of 220 of... 40 3.0
42emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 3.0
43emb|AJ440220.1|OSA440220 Oryza sativa a9 gene for plasma membran... 40 3.0
44gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
45gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 3.0
46gb|AC097446.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
47gb|AD001527.1|CH19F24590 Homo sapiens DNA from chromosome 19-cos... 40 3.0
48gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon... 40 3.0
49dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
50dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
51dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
52dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
53dbj|AP003337.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
54gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 3.0
55gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 3.0
56dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
57dbj|AK107346.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
58gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 3.0
59gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 3.0
60gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 3.0
61gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
62gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
63emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 40 3.0
64emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 40 3.0
65gb|AC002984.1|AC002984 Human DNA from chromosome 19-specific cos... 40 3.0 
>gb|AY057118.1| Triticum aestivum cold acclimation protein WCOR413-like protein
           beta form mRNA, complete cds
          Length = 993

 Score =  260 bits (131), Expect = 2e-66
 Identities = 144/147 (97%), Gaps = 1/147 (0%)
 Strand = Plus / Plus

                                                                       
Query: 87  aggtctcggcgattcgggggaagatggcgccgtcgttcctcgcgatgaagacgggcgcgg 146
           ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 43  aggtctcggcgattcggggga-gatggcgccgtcgttcctcgcgatgaaggcgggcgcgg 101

                                                                       
Query: 147 cgtccggcgcgtcggaggcggcgcaggcgctgctcgagtcggacctgcgggagctgggca 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 cgtccggcgcgtcggaggcggcgcaggcgctgctcgagtcggacctgcgggagctgggca 161

                                      
Query: 207 tggccgcgcggaagctcgccaaccacg 233
           |||| ||||||||||||||||||||||
Sbjct: 162 tggcggcgcggaagctcgccaaccacg 188
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>gb|U73216.1|TAU73216 Triticum aestivum cold acclimation protein WCOR413 (Wcor413) mRNA,
           complete cds
          Length = 896

 Score =  174 bits (88), Expect = 8e-41
 Identities = 109/116 (93%)
 Strand = Plus / Plus

                                                                       
Query: 118 gtcgttcctcgcgatgaagacgggcgcggcgtccggcgcgtcggaggcggcgcaggcgct 177
           ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 72  gtcgttcctcgcgatgaagacgggcccggcggccggcgcgtcggaggcgtcgcaggcgct 131

                                                                   
Query: 178 gctcgagtcggacctgcgggagctgggcatggccgcgcggaagctcgccaaccacg 233
           ||| |||||||||||||||||||||  |||||| ||||||||||||||||||||||
Sbjct: 132 gctggagtcggacctgcgggagctgaccatggcggcgcggaagctcgccaaccacg 187
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>gb|BT017742.1| Zea mays clone EL01N0449E04.c mRNA sequence
          Length = 1064

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                       
Query: 169 gcaggcgctgctcgagtcggacctgcgggagctgggcatggccgcgcggaagctcgccaa 228
           |||||| ||| ||||  |||||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 169 gcaggctctgatcgacgcggacctgcgggagctcggcgtcgccgcgcggaagctcgccaa 228

                
Query: 229 ccacg 233
           |||||
Sbjct: 229 ccacg 233
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>gb|AY181208.1| Zea mays cold acclimation protein COR413-PM1 mRNA, complete cds
          Length = 1126

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                       
Query: 169 gcaggcgctgctcgagtcggacctgcgggagctgggcatggccgcgcggaagctcgccaa 228
           |||||| ||| ||||  |||||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 141 gcaggctctgatcgacgcggacctgcgggagctcggcgtcgccgcgcggaagctcgccaa 200

                
Query: 229 ccacg 233
           |||||
Sbjct: 201 ccacg 205
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>gb|AY106041.1| Zea mays PCO103483 mRNA sequence
          Length = 1220

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                       
Query: 169 gcaggcgctgctcgagtcggacctgcgggagctgggcatggccgcgcggaagctcgccaa 228
           |||||| ||| ||||  |||||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 329 gcaggctctgatcgacgcggacctgcgggagctcggcgtcgccgcgcggaagctcgccaa 388

                
Query: 229 ccacg 233
           |||||
Sbjct: 389 ccacg 393
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>ref|XM_469914.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1118

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 67/77 (87%), Gaps = 3/77 (3%)
 Strand = Plus / Plus

                                                                       
Query: 160 ggaggcggcgcaggcg---ctgctcgagtcggacctgcgggagctgggcatggccgcgcg 216
           ||||||||||||||||   ||| ||||  | ||||||| |||||||||| |||| |||||
Sbjct: 188 ggaggcggcgcaggcggcgctgatcgacgccgacctgcaggagctgggcgtggcggcgcg 247

                            
Query: 217 gaagctcgccaaccacg 233
           |||||||||||||||||
Sbjct: 248 gaagctcgccaaccacg 264
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 67/77 (87%), Gaps = 3/77 (3%)
 Strand = Plus / Plus

                                                                            
Query: 160      ggaggcggcgcaggcg---ctgctcgagtcggacctgcgggagctgggcatggccgcgcg 216
                ||||||||||||||||   ||| ||||  | ||||||| |||||||||| |||| |||||
Sbjct: 31486900 ggaggcggcgcaggcggcgctgatcgacgccgacctgcaggagctgggcgtggcggcgcg 31486959

                                 
Query: 217      gaagctcgccaaccacg 233
                |||||||||||||||||
Sbjct: 31486960 gaagctcgccaaccacg 31486976



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 142     cgcggcgtccggcgcgtcggaggcggcg 169
               ||||||||||| |||||||||| |||||
Sbjct: 4386742 cgcggcgtccgtcgcgtcggagacggcg 4386769
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>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
              sequence
          Length = 133449

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 67/77 (87%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                          
Query: 160    ggaggcggcgcaggcg---ctgctcgagtcggacctgcgggagctgggcatggccgcgcg 216
              ||||||||||||||||   ||| ||||  | ||||||| |||||||||| |||| |||||
Sbjct: 105696 ggaggcggcgcaggcggcgctgatcgacgccgacctgcaggagctgggcgtggcggcgcg 105637

                               
Query: 217    gaagctcgccaaccacg 233
              |||||||||||||||||
Sbjct: 105636 gaagctcgccaaccacg 105620
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>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence,
            complete sequence
          Length = 159091

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 67/77 (87%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                        
Query: 160  ggaggcggcgcaggcg---ctgctcgagtcggacctgcgggagctgggcatggccgcgcg 216
            ||||||||||||||||   ||| ||||  | ||||||| |||||||||| |||| |||||
Sbjct: 8900 ggaggcggcgcaggcggcgctgatcgacgccgacctgcaggagctgggcgtggcggcgcg 8841

                             
Query: 217  gaagctcgccaaccacg 233
            |||||||||||||||||
Sbjct: 8840 gaagctcgccaaccacg 8824
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>gb|AF283006.1| Oryza sativa (japonica cultivar-group) cold acclimation protein
           WCOR413-like protein mRNA, complete cds
          Length = 1057

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 67/77 (87%), Gaps = 3/77 (3%)
 Strand = Plus / Plus

                                                                       
Query: 160 ggaggcggcgcaggcg---ctgctcgagtcggacctgcgggagctgggcatggccgcgcg 216
           ||||||||||||||||   ||| ||||  | ||||||| |||||||||| |||| |||||
Sbjct: 161 ggaggcggcgcaggcggcgctgatcgacgccgacctgcaggagctgggcgtggcggcgcg 220

                            
Query: 217 gaagctcgccaaccacg 233
           |||||||||||||||||
Sbjct: 221 gaagctcgccaaccacg 237
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 67/77 (87%), Gaps = 3/77 (3%)
 Strand = Plus / Plus

                                                                            
Query: 160      ggaggcggcgcaggcg---ctgctcgagtcggacctgcgggagctgggcatggccgcgcg 216
                ||||||||||||||||   ||| ||||  | ||||||| |||||||||| |||| |||||
Sbjct: 31577416 ggaggcggcgcaggcggcgctgatcgacgccgacctgcaggagctgggcgtggcggcgcg 31577475

                                 
Query: 217      gaagctcgccaaccacg 233
                |||||||||||||||||
Sbjct: 31577476 gaagctcgccaaccacg 31577492



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 142     cgcggcgtccggcgcgtcggaggcggcg 169
               ||||||||||| |||||||||| |||||
Sbjct: 4386857 cgcggcgtccgtcgcgtcggagacggcg 4386884
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>dbj|AK060906.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F05, full
           insert sequence
          Length = 1031

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 67/77 (87%), Gaps = 3/77 (3%)
 Strand = Plus / Plus

                                                                       
Query: 160 ggaggcggcgcaggcg---ctgctcgagtcggacctgcgggagctgggcatggccgcgcg 216
           ||||||||||||||||   ||| ||||  | ||||||| |||||||||| |||| |||||
Sbjct: 157 ggaggcggcgcaggcggcgctgatcgacgccgacctgcaggagctgggcgtggcggcgcg 216

                            
Query: 217 gaagctcgccaaccacg 233
           |||||||||||||||||
Sbjct: 217 gaagctcgccaaccacg 233
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>dbj|AK060000.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G09, full
           insert sequence
          Length = 1061

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 67/77 (87%), Gaps = 3/77 (3%)
 Strand = Plus / Plus

                                                                       
Query: 160 ggaggcggcgcaggcg---ctgctcgagtcggacctgcgggagctgggcatggccgcgcg 216
           ||||||||||||||||   ||| ||||  | ||||||| |||||||||| |||| |||||
Sbjct: 205 ggaggcggcgcaggcggcgctgatcgacgccgacctgcaggagctgggcgtggcggcgcg 264

                            
Query: 217 gaagctcgccaaccacg 233
           |||||||||||||||||
Sbjct: 265 gaagctcgccaaccacg 281
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>dbj|AK066036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049B03, full
           insert sequence
          Length = 1116

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 66/77 (85%), Gaps = 3/77 (3%)
 Strand = Plus / Plus

                                                                       
Query: 160 ggaggcggcgcaggcg---ctgctcgagtcggacctgcgggagctgggcatggccgcgcg 216
           ||||||||||||||||   ||| ||||  | ||| ||| |||||||||| |||| |||||
Sbjct: 185 ggaggcggcgcaggcggcgctgatcgacgccgacttgcaggagctgggcgtggcggcgcg 244

                            
Query: 217 gaagctcgccaaccacg 233
           |||||||||||||||||
Sbjct: 245 gaagctcgccaaccacg 261
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>emb|AL627282.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 18/20
          Length = 234050

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 103    ggggaagatggcgccgtcgttc 124
              ||||||||||||||||||||||
Sbjct: 178220 ggggaagatggcgccgtcgttc 178199



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    gcggcgcaggcgctgctcga 183
              ||||||||||||||||||||
Sbjct: 157894 gcggcgcaggcgctgctcga 157875
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 162     aggcggcgcaggcgctgctcga 183
               ||||||||||||||||||||||
Sbjct: 1357938 aggcggcgcaggcgctgctcga 1357959
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>ref|NM_212197.1| Eremothecium gossypii AFR514Cp (AFR514C), mRNA
          Length = 603

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 162 aggcggcgcaggcgctgctcga 183
           ||||||||||||||||||||||
Sbjct: 170 aggcggcgcaggcgctgctcga 149
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 103     ggggaagatggcgccgtcgttc 124
               ||||||||||||||||||||||
Sbjct: 4400870 ggggaagatggcgccgtcgttc 4400849



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 164     gcggcgcaggcgctgctcga 183
               ||||||||||||||||||||
Sbjct: 4380544 gcggcgcaggcgctgctcga 4380525
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 141     gcgcggcgtccggcgcgtcgg 161
               |||||||||||||||||||||
Sbjct: 1325014 gcgcggcgtccggcgcgtcgg 1325034



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 161     gaggcggcgcaggcgctgctcgag 184
               ||||||||||||||||||| ||||
Sbjct: 3351793 gaggcggcgcaggcgctgcgcgag 3351770
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>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 158    tcggaggcggcgcaggcgctgctcg 182
              ||||| |||||||||||||||||||
Sbjct: 110406 tcggatgcggcgcaggcgctgctcg 110382
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 151      cggcgcgtcggaggcggcgcaggcgctgc 179
                ||||||| || ||||||||||||||||||
Sbjct: 28442828 cggcgcgccgtaggcggcgcaggcgctgc 28442800
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>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0661G04
          Length = 157292

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 151    cggcgcgtcggaggcggcgcaggcgctgc 179
              ||||||| || ||||||||||||||||||
Sbjct: 155406 cggcgcgccgtaggcggcgcaggcgctgc 155378
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>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0532H03
          Length = 166128

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 151   cggcgcgtcggaggcggcgcaggcgctgc 179
             ||||||| || ||||||||||||||||||
Sbjct: 49861 cggcgcgccgtaggcggcgcaggcgctgc 49833
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>dbj|AK108191.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C02, full
           insert sequence
          Length = 1130

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 151 cggcgcgtcggaggcggcgcaggcgctgc 179
           ||||||| || ||||||||||||||||||
Sbjct: 651 cggcgcgccgtaggcggcgcaggcgctgc 623
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 161    gaggcggcgcaggcgctgctc 181
              |||||||||||||||||||||
Sbjct: 168459 gaggcggcgcaggcgctgctc 168479
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>ref|NM_183931.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 462

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 159 cggaggcggcgcaggcgctgctcgagtc 186
           |||||| ||||| |||||||||||||||
Sbjct: 356 cggaggaggcgcgggcgctgctcgagtc 383
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>ref|NM_192555.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 936

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cggaggcggcgcaggcgctg 178
           ||||||||||||||||||||
Sbjct: 71  cggaggcggcgcaggcgctg 90
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>ref|XM_470567.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2826

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 142  cgcggcgtccggcgcgtcggaggcggcg 169
            ||||||||||| |||||||||| |||||
Sbjct: 1860 cgcggcgtccgtcgcgtcggagacggcg 1833
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>gb|AY789642.1| Homo sapiens calpain, small subunit 1 (CAPNS1) gene, complete cds
          Length = 13695

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 ggaggcggcgcaggcgctgc 179
           ||||||||||||||||||||
Sbjct: 892 ggaggcggcgcaggcgctgc 911
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 160     ggaggcggcgcaggcgctgctcga 183
               ||||| ||||||||||||||||||
Sbjct: 2082075 ggaggaggcgcaggcgctgctcga 2082098
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     cgggcgcggcgtccggcgcg 157
               ||||||||||||||||||||
Sbjct: 1709115 cgggcgcggcgtccggcgcg 1709096
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>gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosome 8, complete sequence
          Length = 151221

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     acaaatcaaaccccaagccc 23
             ||||||||||||||||||||
Sbjct: 41514 acaaatcaaaccccaagccc 41495
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     cgggcgcggcgtccggcgcg 157
               ||||||||||||||||||||
Sbjct: 2954586 cgggcgcggcgtccggcgcg 2954567
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>ref|NM_001040427.1| Homo sapiens hydroxyacylglutathione hydrolase (HAGH), transcript
           variant 2, mRNA
          Length = 1648

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cggaggcggcgcaggcgctg 178
           ||||||||||||||||||||
Sbjct: 513 cggaggcggcgcaggcgctg 532
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>gb|AC164874.3| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940134D9, complete sequence
          Length = 113536

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   cgtcggaggcggcgcaggcgctgc 179
             |||||| |||||||||||||||||
Sbjct: 61980 cgtcggcggcggcgcaggcgctgc 61957
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>gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, complete sequence
          Length = 202151

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      acaaatcaaaccccaagccc 23
              ||||||||||||||||||||
Sbjct: 183307 acaaatcaaaccccaagccc 183288
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>emb|Z35595.1|CEC01G6 Caenorhabditis elegans Cosmid C01G6, complete sequence
          Length = 43410

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tttccaggtctcggcgattc 101
             ||||||||||||||||||||
Sbjct: 30137 tttccaggtctcggcgattc 30156
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>ref|XM_546236.2| PREDICTED: Canis familiaris similar to Neuralized-like protein 1
            (m-neuralized 1) (m-neu1) (LOC489118), mRNA
          Length = 1827

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 172  ggcgctgctcgagtcggacctgcg 195
            ||||||||||||| ||||||||||
Sbjct: 1071 ggcgctgctcgaggcggacctgcg 1094
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>emb|AL031722.20|HS429E7 Human DNA sequence from clone LA16c-429E7 on chromosome 16 Contains the
             HAGH (hydroxyacyl glutathione hydrolase) gene, ESTs, STSs,
             GSSs and CpG Islands, complete sequence
          Length = 38080

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   cggaggcggcgcaggcgctg 178
             ||||||||||||||||||||
Sbjct: 19024 cggaggcggcgcaggcgctg 19005
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>gb|AC012180.6| Homo sapiens chromosome 16 clone RP11-31I10, complete sequence
          Length = 69437

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   cggaggcggcgcaggcgctg 178
             ||||||||||||||||||||
Sbjct: 63584 cggaggcggcgcaggcgctg 63565
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>gb|AE008902.1| Salmonella typhimurium LT2, section 206 of 220 of the complete genome
          Length = 21440

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  gcggcgcaggcgctgctcga 183
            ||||||||||||||||||||
Sbjct: 7018 gcggcgcaggcgctgctcga 6999
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     cgggcgcggcgtccggcgcg 157
               ||||||||||||||||||||
Sbjct: 2684579 cgggcgcggcgtccggcgcg 2684560
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>emb|AJ440220.1|OSA440220 Oryza sativa a9 gene for plasma membrane H+-ATPase
          Length = 5094

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 142  cgcggcgtccggcgcgtcggaggcggcg 169
            ||||||||||| |||||||||| |||||
Sbjct: 3235 cgcggcgtccgtcgcgtcggagacggcg 3208
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>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0034B05, complete sequence
          Length = 125655

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   gcggaagctcgccaaccacg 233
             ||||||||||||||||||||
Sbjct: 34169 gcggaagctcgccaaccacg 34188
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 43      tgcgcagagctcgatccgca 62
               ||||||||||||||||||||
Sbjct: 3392063 tgcgcagagctcgatccgca 3392044
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>gb|AC097446.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0034B05,
              complete sequence
          Length = 175061

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    gcggaagctcgccaaccacg 233
              ||||||||||||||||||||
Sbjct: 149230 gcggaagctcgccaaccacg 149249
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>gb|AD001527.1|CH19F24590 Homo sapiens DNA from chromosome 19-cosmid f24590 containing CAPNS and
             POL2RI, genomic sequence
          Length = 41369

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ggaggcggcgcaggcgctgc 179
             ||||||||||||||||||||
Sbjct: 29537 ggaggcggcgcaggcgctgc 29556
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>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 142   cgcggcgtccggcgcgtcggaggcggcg 169
             ||||||||||| |||||||||| |||||
Sbjct: 39755 cgcggcgtccgtcgcgtcggagacggcg 39728
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 214      gcggaagctcgccaaccacg 233
                ||||||||||||||||||||
Sbjct: 18939292 gcggaagctcgccaaccacg 18939273
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 214     gcggaagctcgccaaccacg 233
               ||||||||||||||||||||
Sbjct: 3377385 gcggaagctcgccaaccacg 3377404
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 159      cggaggcggcgcaggcgctg 178
                ||||||||||||||||||||
Sbjct: 22912111 cggaggcggcgcaggcgctg 22912092



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 159      cggaggcggcgcaggcgctgctcgagtc 186
                |||||| ||||| |||||||||||||||
Sbjct: 13356854 cggaggaggcgcgggcgctgctcgagtc 13356881



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 159      cggaggcggcgcaggcgctgctcgagtc 186
                |||||| ||||| |||||||||||||||
Sbjct: 13343291 cggaggaggcgccggcgctgctcgagtc 13343318
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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    cggaggcggcgcaggcgctg 178
              ||||||||||||||||||||
Sbjct: 115668 cggaggcggcgcaggcgctg 115649
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>dbj|AP003337.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OJ1111_G12
          Length = 112664

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 159  cggaggcggcgcaggcgctgctcgagtc 186
            |||||| ||||| |||||||||||||||
Sbjct: 1407 cggaggaggcgcgggcgctgctcgagtc 1434
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 101     cgggggaagatggcgccgtc 120
               ||||||||||||||||||||
Sbjct: 2687715 cgggggaagatggcgccgtc 2687734
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 164     gcggcgcaggcgctgctcga 183
               ||||||||||||||||||||
Sbjct: 4302693 gcggcgcaggcgctgctcga 4302674
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>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088D01
          Length = 146144

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 159   cggaggcggcgcaggcgctgctcgagtc 186
             |||||| ||||| |||||||||||||||
Sbjct: 97212 cggaggaggcgcgggcgctgctcgagtc 97239



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 159   cggaggcggcgcaggcgctgctcgagtc 186
             |||||| ||||| |||||||||||||||
Sbjct: 83649 cggaggaggcgccggcgctgctcgagtc 83676
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>dbj|AK107346.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-G10, full
           insert sequence
          Length = 1175

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cggaggcggcgcaggcgctg 178
           ||||||||||||||||||||
Sbjct: 174 cggaggcggcgcaggcgctg 193
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 164     gcggcgcaggcgctgctcga 183
               ||||||||||||||||||||
Sbjct: 4485311 gcggcgcaggcgctgctcga 4485292
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     cgggcgcggcgtccggcgcg 157
               ||||||||||||||||||||
Sbjct: 3103368 cgggcgcggcgtccggcgcg 3103349



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 138     cgggcgcggcgtccggcgcg 157
               ||||||||||||||||||||
Sbjct: 2208593 cgggcgcggcgtccggcgcg 2208612
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 159     cggaggcggcgcaggcgctgctcg 182
               |||||||||||| |||||||||||
Sbjct: 1981538 cggaggcggcgcgggcgctgctcg 1981561
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 214     gcggaagctcgccaaccacg 233
               ||||||||||||||||||||
Sbjct: 3377306 gcggaagctcgccaaccacg 3377325
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 214      gcggaagctcgccaaccacg 233
                ||||||||||||||||||||
Sbjct: 18865519 gcggaagctcgccaaccacg 18865500
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>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153064

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   gcggaagctcgccaaccacg 233
             ||||||||||||||||||||
Sbjct: 31087 gcggaagctcgccaaccacg 31106
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>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151203

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   gcggaagctcgccaaccacg 233
             ||||||||||||||||||||
Sbjct: 35409 gcggaagctcgccaaccacg 35390
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>gb|AC002984.1|AC002984 Human DNA from chromosome 19-specific cosmid R33853, genomic
            sequence, complete sequence
          Length = 40946

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 160  ggaggcggcgcaggcgctgc 179
            ||||||||||||||||||||
Sbjct: 5245 ggaggcggcgcaggcgctgc 5264


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,968,503
Number of Sequences: 3902068
Number of extensions: 1968503
Number of successful extensions: 237807
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 236449
Number of HSP's gapped (non-prelim): 1348
length of query: 233
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 211
effective length of database: 17,147,199,772
effective search space: 3618059151892
effective search space used: 3618059151892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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