ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet60e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FL3H_VITVI (P41090) Naringenin,2-oxoglutarate 3-dioxygenase (EC ... 29 3.7
2ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disinteg... 29 3.7
3MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phos... 28 4.8
4HEMH_PROFR (P72183) Ferrochelatase (EC 4.99.1.1) (Protoheme ferr... 28 6.3
5PHD1_SCHPO (O13298) Histone deacetylase phd1 28 6.3

>FL3H_VITVI (P41090) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)|
           (Flavonone-3-hydroxylase) (F3H) (FHT)
          Length = 364

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 73  F*FPVRIRTVKAWPIDPLDLRSLKLEVSEKL 165
           F +P+R R    WP  P   RS+  E SEKL
Sbjct: 135 FSYPLRTRDYSRWPDKPEGWRSVTQEYSEKL 165



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>ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 9) (ADAM-TS
           9) (ADAM-TS9)
          Length = 1935

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -3

Query: 188 PQASYPCGNFSDTSSFKLRRSKGSIGHAFTVR-IRTGNQNQTSFY 57
           PQA Y    F     F L  + G I   FTV  + T   NQT FY
Sbjct: 96  PQAHYRLSAFGQQFLFNLTANAGFIAPLFTVTLLGTPGVNQTKFY 140



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>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (mNIFK)
          Length = 317

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -3

Query: 170 CGNFSDTSSFKLRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 24
           C  F D S F+L RSK           RTGN    +F  F   +++ +V
Sbjct: 67  CAQFGDISRFRLSRSK-----------RTGNSKGYAFVEFESEDVAKIV 104



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>HEMH_PROFR (P72183) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 352

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 63  ARLILISSTNTNRESVAYRSFRSSEFEARGVRKVTT 170
           AR I +   N NR S+ Y     ++ ++RG+R+V T
Sbjct: 71  ARGIDVPIANANRHSMPYMDQALADLQSRGIRRVLT 106



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>PHD1_SCHPO (O13298) Histone deacetylase phd1|
          Length = 434

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 15/61 (24%), Positives = 27/61 (44%)
 Frame = -3

Query: 188 PQASYPCGNFSDTSSFKLRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILG 9
           P+ S P       S F  R  K  + +    ++  GN +    +P  PH I++   L++G
Sbjct: 4   PETSTPYEQVEKGSFFSFRPQKKRVTYHLDEQV--GNYHYGDKHPMKPHRITITNHLVMG 61

Query: 8   H 6
           +
Sbjct: 62  Y 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,950,332
Number of Sequences: 219361
Number of extensions: 504386
Number of successful extensions: 1312
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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