ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet60b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188639.1| Oryza sativa (japonica cultivar-group), Ozsa8242 predicted mRNA Length = 615 Score = 73.8 bits (37), Expect = 2e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 119 tggaagaccaaggttctccccgggctcagcaagttcttcgacaaggatggcaagaaggcc 178 |||||||||||||||||| | || |||| |||| |||| ||||||||||| |||||||| Sbjct: 13 tggaagaccaaggttctcactggactcaacaagctctttgacaaggatggaaagaaggct 72 Query: 179 gccgccgccgagttcttgaaa 199 || || || |||||||||||| Sbjct: 73 gctgctgctgagttcttgaaa 93
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 2e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 119 tggaagaccaaggttctccccgggctcagcaagttcttcgacaaggatggcaagaaggcc 178 |||||||||||||||||| | || |||| |||| |||| ||||||||||| |||||||| Sbjct: 7364801 tggaagaccaaggttctcactggactcaacaagctctttgacaaggatggaaagaaggct 7364742 Query: 179 gccgccgccgagttcttgaaa 199 || || || |||||||||||| Sbjct: 7364741 gctgctgctgagttcttgaaa 7364721 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 caagaaggccgccgccgccg 188 |||||||||||||||||||| Sbjct: 40087658 caagaaggccgccgccgccg 40087677 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 30091714 aagaaggccgccgccgccg 30091696
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 73.8 bits (37), Expect = 2e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 119 tggaagaccaaggttctccccgggctcagcaagttcttcgacaaggatggcaagaaggcc 178 |||||||||||||||||| | || |||| |||| |||| ||||||||||| |||||||| Sbjct: 25829 tggaagaccaaggttctcactggactcaacaagctctttgacaaggatggaaagaaggct 25770 Query: 179 gccgccgccgagttcttgaaa 199 || || || |||||||||||| Sbjct: 25769 gctgctgctgagttcttgaaa 25749
>dbj|AK065256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J14, full insert sequence Length = 1243 Score = 73.8 bits (37), Expect = 2e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 119 tggaagaccaaggttctccccgggctcagcaagttcttcgacaaggatggcaagaaggcc 178 |||||||||||||||||| | || |||| |||| |||| ||||||||||| |||||||| Sbjct: 156 tggaagaccaaggttctcactggactcaacaagctctttgacaaggatggaaagaaggct 215 Query: 179 gccgccgccgagttcttgaaa 199 || || || |||||||||||| Sbjct: 216 gctgctgctgagttcttgaaa 236
>gb|AE009144.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 170 of 256 of the complete sequence Length = 10570 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 gttcttcgacaaggatggcaag 172 |||||||||||||||||||||| Sbjct: 6692 gttcttcgacaaggatggcaag 6713
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 gttcttcgacaaggatggcaag 172 |||||||||||||||||||||| Sbjct: 1882222 gttcttcgacaaggatggcaag 1882243
>gb|AY106060.1| Zea mays PCO086292 mRNA sequence Length = 717 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 ggcaagaaggccgccgccgccg 188 |||||||||||||||||||||| Sbjct: 198 ggcaagaaggccgccgccgccg 219
>ref|XM_470278.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2039 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttcttg 196 ||||||||||||||||||||| Sbjct: 227 gccgccgccgccgagttcttg 207
>gb|AE013000.1| Thermoanaerobacter tengcongensis MB4, section 27 of 244 of the complete genome Length = 10206 Score = 42.1 bits (21), Expect = 0.63 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 acatctttgaaggagaggaatatga 110 |||||||||||| |||||||||||| Sbjct: 8631 acatctttgaagaagaggaatatga 8655
>ref|XM_454145.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E04345g predicted mRNA Length = 1287 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atggcaagaaggccgccgccg 185 ||||||||||||||||||||| Sbjct: 470 atggcaagaaggccgccgccg 490
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttcttg 196 ||||||||||||||||||||| Sbjct: 3635979 gccgccgccgccgagttcttg 3635959 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 22544689 gccgccgccgccgagttct 22544671
>ref|XM_569294.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein (CNB05510) partial mRNA Length = 607 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ggcaagaaggccgccgccgcc 187 ||||||||||||||||||||| Sbjct: 442 ggcaagaaggccgccgccgcc 462
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atggcaagaaggccgccgccg 185 ||||||||||||||||||||| Sbjct: 401312 atggcaagaaggccgccgccg 401292
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 ggcaagaaggccgccgccgcc 187 ||||||||||||||||||||| Sbjct: 1547437 ggcaagaaggccgccgccgcc 1547417
>gb|AF369707.1| Capsicum annuum importin alpha 2 mRNA, complete cds Length = 2096 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccgag 190 ||||||||||||||||||||| Sbjct: 88 aagaaggccgccgccgccgag 108
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 gccgccgccgccgagttcttg 196 ||||||||||||||||||||| Sbjct: 145398 gccgccgccgccgagttcttg 145418
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttcttg 196 ||||||||||||||||||||| Sbjct: 3636090 gccgccgccgccgagttcttg 3636070 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 22537718 gccgccgccgccgagttct 22537700
>dbj|AK121254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102A19, full insert sequence Length = 2337 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttcttg 196 ||||||||||||||||||||| Sbjct: 595 gccgccgccgccgagttcttg 575
>dbj|AK066462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067A01, full insert sequence Length = 1761 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgccgccgccgagttcttga 197 ||||||||||||||||||||| Sbjct: 462 ccgccgccgccgagttcttga 482
>ref|XM_463615.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1677 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 caagaaggccgccgccgccg 188 |||||||||||||||||||| Sbjct: 717 caagaaggccgccgccgccg 736
>ref|XM_472218.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 579 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 caagaaggccgccgccgccg 188 |||||||||||||||||||| Sbjct: 543 caagaaggccgccgccgccg 562
>ref|XM_365668.1| Magnaporthe grisea 70-15 hypothetical protein (MG02370.4) partial mRNA Length = 972 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gccgccgccgccgagttctt 195 |||||||||||||||||||| Sbjct: 370 gccgccgccgccgagttctt 389
>gb|AC150912.3| Pan troglodytes BAC clone CH251-18B3 from chromosome 7, complete sequence Length = 170021 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ataggctggtgatcacttct 34 |||||||||||||||||||| Sbjct: 59507 ataggctggtgatcacttct 59488
>gb|BC019463.1| Mus musculus WD repeat domain 33, mRNA (cDNA clone IMAGE:4035918), complete cds Length = 1215 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 76 catctttgaaggagaggaat 95
>gb|BC030076.1| Mus musculus WD repeat domain 33, mRNA (cDNA clone IMAGE:1511452), complete cds Length = 1046 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 8 catctttgaaggagaggaat 27
>gb|AC161821.4| Pan troglodytes BAC clone CH251-507E3 from chromosome 7, complete sequence Length = 211131 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ataggctggtgatcacttct 34 |||||||||||||||||||| Sbjct: 206004 ataggctggtgatcacttct 206023
>gb|AC148932.3| Pan troglodytes BAC clone CH251-571G8 from chromosome 7, complete sequence Length = 232604 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ataggctggtgatcacttct 34 |||||||||||||||||||| Sbjct: 200659 ataggctggtgatcacttct 200640
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 caaggatggcaagaaggccg 179 |||||||||||||||||||| Sbjct: 2184976 caaggatggcaagaaggccg 2184995
>gb|AC131761.4| Mus musculus BAC clone RP24-228J4 from chromosome 18, complete sequence Length = 167442 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 163704 catctttgaaggagaggaat 163685
>gb|AC124393.5| Mus musculus BAC clone RP24-331E1 from chromosome 18, complete sequence Length = 171769 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 132013 catctttgaaggagaggaat 132032
>gb|AC002480.1| Homo sapiens BAC clone GS1-55K18 from 7, complete sequence Length = 200167 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ataggctggtgatcacttct 34 |||||||||||||||||||| Sbjct: 32080 ataggctggtgatcacttct 32061
>gb|AC004969.1| Homo sapiens PAC clone RP5-1121E10 from 7, complete sequence Length = 105247 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ataggctggtgatcacttct 34 |||||||||||||||||||| Sbjct: 25875 ataggctggtgatcacttct 25894
>gb|AC142337.1| Pan troglodytes BAC clone RP43-39F23 from 7, complete sequence Length = 157646 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ataggctggtgatcacttct 34 |||||||||||||||||||| Sbjct: 88381 ataggctggtgatcacttct 88400
>gb|AC161511.3| Mus musculus chromosome 18, clone RP23-37O16, complete sequence Length = 186860 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 23876 catctttgaaggagaggaat 23857
>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01, complete sequence Length = 148353 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 caagaaggccgccgccgccg 188 |||||||||||||||||||| Sbjct: 97029 caagaaggccgccgccgccg 97010
>gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, complete sequence Length = 152794 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ctttgaaggagaggaatatg 109 |||||||||||||||||||| Sbjct: 119261 ctttgaaggagaggaatatg 119280
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggatggcaagaaggccgccg 182 |||||||||||||||||||| Sbjct: 3981417 ggatggcaagaaggccgccg 3981436
>gb|AE005710.1| Caulobacter crescentus CB15 section 36 of 359 of the complete genome Length = 11283 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 aggccgccgccgccgagttc 193 |||||||||||||||||||| Sbjct: 7152 aggccgccgccgccgagttc 7133
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 caagaaggccgccgccgccg 188 |||||||||||||||||||| Sbjct: 900103 caagaaggccgccgccgccg 900122
>gb|AC104302.2| Homo sapiens chromosome 3 clone RP11-379L20, complete sequence Length = 206872 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ctttgaaggagaggaatatg 109 |||||||||||||||||||| Sbjct: 179333 ctttgaaggagaggaatatg 179314
>dbj|AK161982.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530442D05 product:WDC146 homolog, full insert sequence Length = 2501 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 36 catctttgaaggagaggaat 55
>gb|AC161278.2| Pan troglodytes BAC clone CH251-486B7 from chromosome 7, complete sequence Length = 211383 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ataggctggtgatcacttct 34 |||||||||||||||||||| Sbjct: 168496 ataggctggtgatcacttct 168477
>dbj|AK078286.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430571H07 product:hypothetical Trp-Asp (WD) repeats profile/Trp-Asp (WD) repeats circular profile/G-protein beta WD-40 repeats containing protein, full insert sequence Length = 1116 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 44 catctttgaaggagaggaat 63
>dbj|AK003256.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110001N06 product:hypothetical G-protein beta WD-40 repeats containing protein, full insert sequence Length = 1166 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 44 catctttgaaggagaggaat 63
>gb|AC148835.3| Pan troglodytes BAC clone CH251-25M11 from chromosome 7, complete sequence Length = 154596 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ataggctggtgatcacttct 34 |||||||||||||||||||| Sbjct: 60172 ataggctggtgatcacttct 60153
>dbj|AK009297.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310011G05 product:similar to WDC146 [Homo sapiens], full insert sequence Length = 1023 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 43 catctttgaaggagaggaat 62
>dbj|AK045923.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230323K17 product:hypothetical Trp-Asp (WD) repeats profile/Trp-Asp (WD) repeats circular profile/G-protein beta WD-40 repeats containing protein, full insert sequence Length = 1592 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 35 catctttgaaggagaggaat 54
>dbj|AK050653.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:C920029N20 product:WDC146 homolog [Homo sapiens], full insert sequence Length = 1773 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 36 catctttgaaggagaggaat 55
>dbj|AK045125.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130038H15 product:RIKEN cDNA 1110001N06 gene, full insert sequence Length = 1210 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 36 catctttgaaggagaggaat 55
>dbj|AK018408.1| Mus musculus 16 days embryo lung cDNA, RIKEN full-length enriched library, clone:8430413N20 product:RIKEN cDNA 1110001N06 gene, full insert sequence Length = 1755 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 44 catctttgaaggagaggaat 63
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 caagaaggccgccgccgccg 188 |||||||||||||||||||| Sbjct: 18516402 caagaaggccgccgccgccg 18516383 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 32619539 gccgccgccgccgagttct 32619521
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcatccatctcttcaacctc 69 |||||||||||||||||||| Sbjct: 27688422 gcatccatctcttcaacctc 27688441 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 28246629 aagaaggccgccgccgccg 28246611
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 caagaaggccgccgccgccg 188 |||||||||||||||||||| Sbjct: 30742 caagaaggccgccgccgccg 30761
>ref|XM_226076.3| PREDICTED: Rattus norvegicus WD repeat domain 33 (predicted) (Wdr33_predicted), mRNA Length = 5128 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catctttgaaggagaggaat 106 |||||||||||||||||||| Sbjct: 76 catctttgaaggagaggaat 95
>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011H15 Length = 130146 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcatccatctcttcaacctc 69 |||||||||||||||||||| Sbjct: 85766 gcatccatctcttcaacctc 85785
>dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1125_C01 Length = 123849 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcatccatctcttcaacctc 69 |||||||||||||||||||| Sbjct: 21344 gcatccatctcttcaacctc 21363
>gb|AC006379.2|AC006379 Homo sapiens BAC clone RP11-456N16 from 7p15.1-p13, complete sequence Length = 202719 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ataggctggtgatcacttct 34 |||||||||||||||||||| Sbjct: 24722 ataggctggtgatcacttct 24703
>dbj|AK066697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073F17, full insert sequence Length = 3496 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcatccatctcttcaacctc 69 |||||||||||||||||||| Sbjct: 3015 gcatccatctcttcaacctc 2996
>gb|AF172724.1|AF172724 Caulobacter crescentus structural maintenance of chromosomes protein homolog Smc (smc) gene, complete cds Length = 3701 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 aggccgccgccgccgagttc 193 |||||||||||||||||||| Sbjct: 1025 aggccgccgccgccgagttc 1044
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggatggcaagaaggccgccg 182 |||||||||||||||||||| Sbjct: 3983710 ggatggcaagaaggccgccg 3983729
>gb|AC005400.1|AC005400 Homo sapiens clone UWGC:g1564a310 from 7p14-15, complete sequence Length = 42393 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ataggctggtgatcacttct 34 |||||||||||||||||||| Sbjct: 30140 ataggctggtgatcacttct 30121
>gb|U21216.1|SPU21216 Streptomyces pristinaespiralis NADH:FMN oxidoreductase (snaC) gene, complete cds Length = 770 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ggccgccgccgccgagttct 194 |||||||||||||||||||| Sbjct: 427 ggccgccgccgccgagttct 446
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 123457 gccgccgccgccgagttct 123475
>gb|AF016448.1| Caenorhabditis elegans cosmid F41E6, complete sequence Length = 44427 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 27962 aagaaggccgccgccgccg 27944
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 38.2 bits (19), Expect = 9.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 162 aggatggcaagaaggccgccgcc 184 |||| |||||||||||||||||| Sbjct: 20285 aggaaggcaagaaggccgccgcc 20263
>gb|DQ235174.1| Solanum tuberosum clone 156A02 P40-like protein mRNA, complete cds Length = 1061 Score = 38.2 bits (19), Expect = 9.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 12 ttgataggctggtgatcacttct 34 |||||||||||||||||| |||| Sbjct: 440 ttgataggctggtgatcagttct 418
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 85630 gccgccgccgccgagttct 85648
>gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OABb-433A1, complete sequence Length = 161653 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 catctttgaaggagaggaa 105 ||||||||||||||||||| Sbjct: 131906 catctttgaaggagaggaa 131888
>ref|XM_510279.1| PREDICTED: Pan troglodytes similar to piggyBac transposable element derived 4 (LOC453299), mRNA Length = 952 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 157 cgacaaggatggcaagaag 175 ||||||||||||||||||| Sbjct: 822 cgacaaggatggcaagaag 840
>ref|XM_483817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1976 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 96 aagaaggccgccgccgccg 114
>ref|XM_464019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2670 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 28 aagaaggccgccgccgccg 46
>ref|NM_191814.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 103 aagaaggccgccgccgccg 121
>ref|NM_214192.1| Sus scrofa gelatinase A (MMP-2), mRNA Length = 2857 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 cttcgacaaggatggcaag 172 ||||||||||||||||||| Sbjct: 843 cttcgacaaggatggcaag 861
>gb|DQ207864.1| Solanum tuberosum clone 081G01 ribosome-associated protein p40-like mRNA, complete cds Length = 1106 Score = 38.2 bits (19), Expect = 9.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 12 ttgataggctggtgatcacttct 34 |||||||||||||||||| |||| Sbjct: 451 ttgataggctggtgatcagttct 429
>gb|BT016301.1| Zea mays clone Contig134 mRNA sequence Length = 846 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 169 caagaaggccgccgccgcc 187 ||||||||||||||||||| Sbjct: 442 caagaaggccgccgccgcc 460
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02, complete sequence Length = 146435 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 177 ccgccgccgccgagttctt 195 ||||||||||||||||||| Sbjct: 8753 ccgccgccgccgagttctt 8735
>ref|NM_172608.1| Mus musculus RIKEN cDNA 4732495E13 gene (4732495E13Rik), mRNA Length = 3388 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 gaaggagaggaatatgacg 112 ||||||||||||||||||| Sbjct: 957 gaaggagaggaatatgacg 939
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 catccatctcttcaacctc 69 ||||||||||||||||||| Sbjct: 988095 catccatctcttcaacctc 988077
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10, complete sequence Length = 159672 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 177 ccgccgccgccgagttctt 195 ||||||||||||||||||| Sbjct: 60012 ccgccgccgccgagttctt 59994
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 agaaggccgccgccgccga 189 ||||||||||||||||||| Sbjct: 1699729 agaaggccgccgccgccga 1699711
>gb|AC124103.5| Mus musculus chromosome 15, clone RP24-271M13, complete sequence Length = 177753 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 tctgcagcacacatctttg 94 ||||||||||||||||||| Sbjct: 66100 tctgcagcacacatctttg 66118
>ref|XM_422219.1| PREDICTED: Gallus gallus similar to mKIAA0602 protein (LOC424375), mRNA Length = 2271 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 cacatctttgaaggagagg 103 ||||||||||||||||||| Sbjct: 297 cacatctttgaaggagagg 315
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 139936 gccgccgccgccgagttct 139918
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 tccatctcttcaacctcca 71 ||||||||||||||||||| Sbjct: 53429 tccatctcttcaacctcca 53447
>ref|XM_954079.1| Neurospora crassa OR74A hypothetical protein (NCU09228.1) partial mRNA Length = 2715 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 161 aaggatggcaagaaggccg 179 ||||||||||||||||||| Sbjct: 580 aaggatggcaagaaggccg 598
>ref|XM_955382.1| Neurospora crassa OR74A hypothetical protein (NCU05513.1) partial mRNA Length = 1857 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 304 aagaaggccgccgccgccg 322
>ref|XM_958032.1| Neurospora crassa OR74A hypothetical protein (NCU07864.1) partial mRNA Length = 1650 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 283 aagaaggccgccgccgccg 301
>ref|XM_325367.1| Neurospora crassa OR74A hypothetical protein (NCU05513.1) partial mRNA Length = 1857 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 304 aagaaggccgccgccgccg 322
>ref|XM_328569.1| Neurospora crassa OR74A hypothetical protein (NCU07864.1) partial mRNA Length = 1650 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 283 aagaaggccgccgccgccg 301
>ref|XM_331619.1| Neurospora crassa OR74A hypothetical protein (NCU09228.1) partial mRNA Length = 2715 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 161 aaggatggcaagaaggccg 179 ||||||||||||||||||| Sbjct: 580 aaggatggcaagaaggccg 598
>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence Length = 187758 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 gaaggagaggaatatgacg 112 ||||||||||||||||||| Sbjct: 38949 gaaggagaggaatatgacg 38967
>gb|AC149237.1| Pan troglodytes chromosome X clone RP43-049A09 map human ortholog q28, complete sequence Length = 168371 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 cccattgataggctggtga 26 ||||||||||||||||||| Sbjct: 118950 cccattgataggctggtga 118932
>gb|AC149235.1| Pan troglodytes chromosome X clone PTB-100E10 map human ortholog q28, complete sequence Length = 183411 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 cccattgataggctggtga 26 ||||||||||||||||||| Sbjct: 28063 cccattgataggctggtga 28045
>ref|NM_152595.3| Homo sapiens piggyBac transposable element derived 4 (PGBD4), mRNA Length = 3908 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 157 cgacaaggatggcaagaag 175 ||||||||||||||||||| Sbjct: 2104 cgacaaggatggcaagaag 2122
>gb|AC129561.13| Mus musculus chromosome 1, clone RP23-192P10, complete sequence Length = 217279 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 acatctttgaaggagagga 104 ||||||||||||||||||| Sbjct: 102806 acatctttgaaggagagga 102824
>gb|AY495601.1| Gibberella moniliformis polyketide synthase (PKS11) gene, partial cds Length = 8298 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 165 atggcaagaaggccgccgc 183 ||||||||||||||||||| Sbjct: 4601 atggcaagaaggccgccgc 4619
>ref|XM_571610.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNF03330) partial mRNA Length = 4413 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 catccatctcttcaacctc 69 ||||||||||||||||||| Sbjct: 1270 catccatctcttcaacctc 1252
>ref|XM_806892.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511151.70) partial mRNA Length = 3078 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 163 ggatggcaagaaggccgcc 181 ||||||||||||||||||| Sbjct: 2005 ggatggcaagaaggccgcc 1987
>ref|XM_808232.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508241.30) partial mRNA Length = 3078 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 163 ggatggcaagaaggccgcc 181 ||||||||||||||||||| Sbjct: 2005 ggatggcaagaaggccgcc 1987
>gb|AC079203.9| Homo sapiens chromosome 15, clone RP11-1084A12, complete sequence Length = 197568 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 157 cgacaaggatggcaagaag 175 ||||||||||||||||||| Sbjct: 40453 cgacaaggatggcaagaag 40471
>gb|BC046959.1| Mus musculus RIKEN cDNA 4732495E13 gene, mRNA (cDNA clone MGC:54968 IMAGE:6314456), complete cds Length = 3364 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 gaaggagaggaatatgacg 112 ||||||||||||||||||| Sbjct: 911 gaaggagaggaatatgacg 893
>ref|XM_860423.1| PREDICTED: Canis familiaris similar to calmodulin 1, transcript variant 3 (LOC476428), mRNA Length = 2328 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 tcttcgacaaggatggcaa 171 ||||||||||||||||||| Sbjct: 487 tcttcgacaaggatggcaa 505
>ref|XM_860405.1| PREDICTED: Canis familiaris similar to calmodulin 1, transcript variant 2 (LOC476428), mRNA Length = 2274 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 tcttcgacaaggatggcaa 171 ||||||||||||||||||| Sbjct: 433 tcttcgacaaggatggcaa 451
>ref|XM_533635.2| PREDICTED: Canis familiaris similar to calmodulin 1, transcript variant 1 (LOC476428), mRNA Length = 2332 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 tcttcgacaaggatggcaa 171 ||||||||||||||||||| Sbjct: 491 tcttcgacaaggatggcaa 509
>emb|AL355795.13| Human DNA sequence from clone RP4-668G5 on chromosome 1p23.1-23.3 Contains the 3' end of a novel gene, complete sequence Length = 146715 Score = 38.2 bits (19), Expect = 9.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 81 agcacacatctttgaaggagagg 103 ||||||||||| ||||||||||| Sbjct: 66767 agcacacatctgtgaaggagagg 66745
>ref|XM_785693.1| PREDICTED: Strongylocentrotus purpuratus similar to CG8472-PA, isoform A (LOC585888), mRNA Length = 534 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 tcttcgacaaggatggcaa 171 ||||||||||||||||||| Sbjct: 359 tcttcgacaaggatggcaa 377
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 38.2 bits (19), Expect = 9.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 162 aggatggcaagaaggccgccgcc 184 |||| |||||||||||||||||| Sbjct: 97398 aggaaggcaagaaggccgccgcc 97420
>emb|AL050331.11|HSDJ486I3 Human DNA sequence from clone RP3-486I3 on chromosome 6q22.1-22.3 Contains the 3' end of a novel gene, a novel gene, the gene for KIAA0721 (NAP (Nucleosome Assembly Protein) domain containing protein), a novel gene, an RPS5 (40S Ribosomal Protein S5) pseudogene, the TSPYL gene for TSPY-like (testis specific protein, Y-linked like), the 5' end of a novel gene, the 5' end of the SART gene for squamous cell carcinoma antigen recognised by T cell and two CpG islands, complete sequence Length = 118327 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 137 cccgggctcagcaagttct 155 ||||||||||||||||||| Sbjct: 107441 cccgggctcagcaagttct 107423
>emb|BX883048.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 7/11 Length = 349943 Score = 38.2 bits (19), Expect = 9.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 80 cagcacacatctttgaaggagag 102 |||| |||||||||||||||||| Sbjct: 26240 cagctcacatctttgaaggagag 26262
>emb|BX294150.1| Pirellula sp. strain 1 complete genome; segment 18/24 Length = 283050 Score = 38.2 bits (19), Expect = 9.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 177 ccgccgccgccgagttcttgaaa 199 ||||||||||||||| ||||||| Sbjct: 225574 ccgccgccgccgagtgcttgaaa 225552
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01, complete sequence Length = 153643 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 138273 gccgccgccgccgagttct 138255
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 14560 gccgccgccgccgagttct 14542
>emb|CR932802.1| Mus musculus chromosome 2, clone GenSys-198F12 strain 129/Sv, complete sequence Length = 99647 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 catctttgaaggagaggaa 105 ||||||||||||||||||| Sbjct: 68998 catctttgaaggagaggaa 68980
>emb|CR932799.1| Mus musculus chromosome 2, clone RPCI-22-207E02 strain 129/Sv, complete sequence Length = 151675 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 catctttgaaggagaggaa 105 ||||||||||||||||||| Sbjct: 14257 catctttgaaggagaggaa 14239
>gb|AF232939.1| Bordetella bronchiseptica strain SB22 flagellin gene, partial cds Length = 1045 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 cttcgacaaggatggcaag 172 ||||||||||||||||||| Sbjct: 717 cttcgacaaggatggcaag 735
>gb|AC122175.9| Pan troglodytes clone rp43-99g12, complete sequence Length = 196097 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 79 gcagcacacatctttgaag 97 ||||||||||||||||||| Sbjct: 33985 gcagcacacatctttgaag 34003
>dbj|AK094816.1| Homo sapiens cDNA FLJ37497 fis, clone BRAWH2015853 Length = 2652 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 157 cgacaaggatggcaagaag 175 ||||||||||||||||||| Sbjct: 1022 cgacaaggatggcaagaag 1040
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 ctatctgcagcacacatct 91 ||||||||||||||||||| Sbjct: 3311121 ctatctgcagcacacatct 3311139
>dbj|AK149366.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730001D20 product:Putative MAP kinase activating protein C22orf5 homolog [Homo sapiens], full insert sequence Length = 3342 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 gaaggagaggaatatgacg 112 ||||||||||||||||||| Sbjct: 938 gaaggagaggaatatgacg 920
>dbj|AK158789.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430312K19 product:Putative MAP kinase activating protein C22orf5 homolog [Homo sapiens], full insert sequence Length = 3362 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 gaaggagaggaatatgacg 112 ||||||||||||||||||| Sbjct: 958 gaaggagaggaatatgacg 940
>gb|AF295805.1|AF295805 Sus scrofa gelatinase A (MMP-2) mRNA, complete cds Length = 2857 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 cttcgacaaggatggcaag 172 ||||||||||||||||||| Sbjct: 843 cttcgacaaggatggcaag 861
>emb|CR523946.1| Gallus gallus finished cDNA, clone ChEST666l16 Length = 1736 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 cacatctttgaaggagagg 103 ||||||||||||||||||| Sbjct: 175 cacatctttgaaggagagg 193
>gb|AF155773.3| Gibberella moniliformis fumonisin biosynthetic gene cluster, complete sequence Length = 75658 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 165 atggcaagaaggccgccgc 183 ||||||||||||||||||| Sbjct: 25701 atggcaagaaggccgccgc 25719
>dbj|AK029129.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732495E13 product:DJ5O6.2 (NOVEL PROTEIN SIMILAR TO C. ELEGANS F40E10.6 (ISOFORM 1)) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3315 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 gaaggagaggaatatgacg 112 ||||||||||||||||||| Sbjct: 935 gaaggagaggaatatgacg 917
>ref|NM_072823.2| Caenorhabditis elegans F41E6.11 (F41E6.11) mRNA, complete cds Length = 968 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 912 aagaaggccgccgccgccg 930
>dbj|AK028196.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610507A11 product:DJ5O6.2 (NOVEL PROTEIN SIMILAR TO C. ELEGANS F40E10.6 (ISOFORM 1)) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3286 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 gaaggagaggaatatgacg 112 ||||||||||||||||||| Sbjct: 915 gaaggagaggaatatgacg 897
>dbj|AK048138.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130036O19 product:DJ5O6.2 (NOVEL PROTEIN SIMILAR TO C. ELEGANS F40E10.6 (ISOFORM 1)) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3316 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 gaaggagaggaatatgacg 112 ||||||||||||||||||| Sbjct: 911 gaaggagaggaatatgacg 893
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 tccatctcttcaacctcca 71 ||||||||||||||||||| Sbjct: 21847995 tccatctcttcaacctcca 21848013 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 20326055 aagaaggccgccgccgccg 20326037
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 24909732 gccgccgccgccgagttct 24909750
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 177 ccgccgccgccgagttctt 195 ||||||||||||||||||| Sbjct: 17262700 ccgccgccgccgagttctt 17262682
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 1717831 aagaaggccgccgccgccg 1717813
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 93364 gccgccgccgccgagttct 93382
>gb|AC154717.2| Mus musculus BAC clone RP24-369E16 from chromosome 17, complete sequence Length = 159625 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 gctgcccattgataggctg 22 ||||||||||||||||||| Sbjct: 85989 gctgcccattgataggctg 85971
>gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome 17, complete sequence Length = 224908 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gctgcccattgataggctg 22 ||||||||||||||||||| Sbjct: 193584 gctgcccattgataggctg 193602
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 87704 aagaaggccgccgccgccg 87686
>gb|AY029317.1| Zea mays seven transmembrane protein Mlo6 mRNA, complete cds Length = 1815 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 448 aagaaggccgccgccgccg 466
>gb|AC005731.2| Human X BAC RP11-159I8 (Roswell Park Cancer Institute Human BAC Library), Cosmid LL0XNC01-3C3 (LLNL X Chromosome Library), and BAC GS1-92B2 (Genome Systems Human BAC Library) complete sequence Length = 143944 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 cccattgataggctggtga 26 ||||||||||||||||||| Sbjct: 59798 cccattgataggctggtga 59780
>ref|XM_345374.2| PREDICTED: Rattus norvegicus similar to Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4) (LOC366083), mRNA Length = 3985 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 175 ggccgccgccgccgagttc 193 ||||||||||||||||||| Sbjct: 138 ggccgccgccgccgagttc 156
>dbj|AK194478.1| Mus musculus cDNA, clone:Y1G0115H07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000053820, based on BLAT search Length = 179 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 gaaggagaggaatatgacg 112 ||||||||||||||||||| Sbjct: 142 gaaggagaggaatatgacg 124
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 105182 aagaaggccgccgccgccg 105164
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 35843 aagaaggccgccgccgccg 35825
>emb|BX571892.9| Mouse DNA sequence from clone RP23-207B21 on chromosome 2, complete sequence Length = 170046 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 catctttgaaggagaggaa 105 ||||||||||||||||||| Sbjct: 44574 catctttgaaggagaggaa 44556
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 144183 gccgccgccgccgagttct 144201
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 38444 aagaaggccgccgccgccg 38426
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 130102 aagaaggccgccgccgccg 130084
>dbj|AK121001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044L15, full insert sequence Length = 1611 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 339 aagaaggccgccgccgccg 357
>dbj|AK106797.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-B06, full insert sequence Length = 1730 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 615 gccgccgccgccgagttct 597
>dbj|AK106450.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E11, full insert sequence Length = 1451 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 169 caagaaggccgccgccgcc 187 ||||||||||||||||||| Sbjct: 482 caagaaggccgccgccgcc 500
>dbj|AK073010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144A17, full insert sequence Length = 3389 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 147 aagaaggccgccgccgccg 165
>dbj|AK070318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052O21, full insert sequence Length = 1167 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 176 gccgccgccgccgagttct 194 ||||||||||||||||||| Sbjct: 61 gccgccgccgccgagttct 79
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 167 ggcaagaaggccgccgccg 185 ||||||||||||||||||| Sbjct: 3191402 ggcaagaaggccgccgccg 3191420
>dbj|AK063258.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-A02, full insert sequence Length = 1976 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 96 aagaaggccgccgccgccg 114
>gb|AY108340.1| Zea mays PCO122701 mRNA sequence Length = 1799 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 170 aagaaggccgccgccgccg 188 ||||||||||||||||||| Sbjct: 448 aagaaggccgccgccgccg 466
>gb|AY104486.1| Zea mays PCO109435 mRNA sequence Length = 992 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 169 caagaaggccgccgccgcc 187 ||||||||||||||||||| Sbjct: 513 caagaaggccgccgccgcc 531
>gb|AC122908.4| Mus musculus BAC clone RP23-51D10 from 1, complete sequence Length = 208926 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 acatctttgaaggagagga 104 ||||||||||||||||||| Sbjct: 174670 acatctttgaaggagagga 174688
>emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chromosome 15, complete sequence Length = 196812 Score = 38.2 bits (19), Expect = 9.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 gaaggagaggaatatgacg 112 ||||||||||||||||||| Sbjct: 81640 gaaggagaggaatatgacg 81622 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,160,332 Number of Sequences: 3902068 Number of extensions: 2160332 Number of successful extensions: 309562 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 301285 Number of HSP's gapped (non-prelim): 8277 length of query: 199 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 177 effective length of database: 17,147,199,772 effective search space: 3035054359644 effective search space used: 3035054359644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
