ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet59g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KLF14_HUMAN (Q8TD94) Krueppel-like factor 14 (Transcription fact... 32 0.44
2ZBP2_CHICK (Q8UVD9) Zipcode-binding protein 2 28 4.8
3RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/in... 28 6.3
4EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear a... 28 8.3

>KLF14_HUMAN (Q8TD94) Krueppel-like factor 14 (Transcription factor BTEB5)|
           (Basic transcription element-binding protein 5)
           (BTE-binding protein 5)
          Length = 323

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +1

Query: 118 GANGARR*HGSRVGYREHEEAHVPGPAPAEPTHVPQ 225
           GA GA    GS VG   H E+ +PGP P+ P  VPQ
Sbjct: 34  GAGGAA---GSEVG-AAHPESALPGPGPSGPASVPQ 65



to top

>ZBP2_CHICK (Q8UVD9) Zipcode-binding protein 2|
          Length = 769

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = +1

Query: 46  NLFPRSKPLFLPSPNGQEKXXXXXGANGARR*HGSRVGYREHEEAHVPGPAPAEP 210
           N +P+ +P   P+P+   K       N A        GY  H     PGP P +P
Sbjct: 608 NTYPQWQP---PAPHDPSKAAAAADPNAAW------AGYYSHYYQQPPGPVPGQP 653



to top

>RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/interference|
           protein 2) (Ras inhibitor JC265) (Ras association domain
           family 4)
          Length = 895

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 17/82 (20%)
 Frame = +1

Query: 13  TAPYKARTRTQNLFPRS--------------KPLFLPSPNGQEKXXXXXGANGARR*HGS 150
           T+P  ART TQ   P +              KP  +P P  +++        GA+   G 
Sbjct: 321 TSPRLARTETQTSMPETVNHNKHGNVALPGTKPTPIPPPRLKKQASFLEAEGGAKTLSGG 380

Query: 151 RVGYREHEE---AHVPGPAPAE 207
           R G     E   A  PG AP E
Sbjct: 381 RPGAGPELELGTAGSPGGAPPE 402



to top

>EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear antigen 6)|
           (EBNA-6) (EBNA-3C) (EBNA-4B)
          Length = 992

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 169 HEEAHVPGPAPAEPTHVPQRRR 234
           H+   VP P P +PT  P RRR
Sbjct: 478 HQPPPVPKPVPVKPTPPPSRRR 499


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,349,034
Number of Sequences: 219361
Number of extensions: 408152
Number of successful extensions: 1756
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1731
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top