>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
 Frame = +1

Query: 139 GDSGR---------VGLAKSTRRDVAVQAKGSWLPGLQSPAYLDGSLAG 258
           G SGR         +G +  T        KG WLPGL SP YL GSLAG
Sbjct: 25  GSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAG 73

>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 163 AKSTRRDVAVQAKGSWLPGLQSPAYLDGSLAG 258
           A   +    +  +  W PG +SP YLDGSL G
Sbjct: 40  ASPKKAKTVISDRPLWFPGAKSPEYLDGSLVG 71

>MA1C1_HUMAN (Q9NR34) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC (EC|
           3.2.1.113) (Processing alpha-1,2-mannosidase IC)
           (Alpha-1,2-mannosidase IC) (Mannosidase alpha class 1C
           member 1) (HMIC)
          Length = 630

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 218 PGSQDPLAWTATSRRVDLASPTRPESPR 135
           PG  DP +W +  RR      TRP  PR
Sbjct: 91  PGEDDPSSWASPRRRKGGLRRTRPTGPR 118

>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 166 KSTRRDVAVQAKGSWLPGLQSPAYLDGSLAG 258
           KS ++ V    +  W PG  SP +LDGSL G
Sbjct: 45  KSAKKTVTTD-RPLWYPGAISPDWLDGSLVG 74

>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 208 WLPGLQSPAYLDGSLAG 258
           W+PG   P+YLDGS  G
Sbjct: 49  WMPGQPRPSYLDGSAPG 65

>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 6/33 (18%)
 Frame = +1

Query: 178 RDVAVQAKGS------WLPGLQSPAYLDGSLAG 258
           R VAV A  +      W PG   P +LDGSL G
Sbjct: 52  RSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPG 84

>DOPO_HUMAN (P09172) Dopamine beta-hydroxylase precursor (EC 1.14.17.1)|
           (Dopamine beta-monooxygenase)
          Length = 603

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 60  EDVVGQCPRSRGRSPAG 110
           E+   QCP S+GRSPAG
Sbjct: 576 EEPTPQCPTSQGRSPAG 592

>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = +1

Query: 145 SGRVGLAKSTRRDVAVQAKGSWLPGLQSPAYLDGSLAG 258
           SG VG  K        Q    WLP    P +LDGSL G
Sbjct: 38  SGGVGYRK-------YQGDALWLPNTTRPEWLDGSLPG 68


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,911,770
Number of Sequences: 219361
Number of extensions: 334925
Number of successful extensions: 1065
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)