| Clone Name | baet59c02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y14201.1|HVY14201 Hordeum vulgare mRNA for hypothetical protein, clone pBH6-12 Length = 829 Score = 603 bits (304), Expect = e-169 Identities = 307/308 (99%) Strand = Plus / Plus Query: 22 acgagatgaagatatccatcgcagcagccgctgtcctcctcctggccctggcagccacgg 81 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1 acgagatgaagatatccatcgcagcagccgctgtcctcctcctggccttggcagccacgg 60 Query: 82 ctagcgcggtcacgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgat 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctagcgcggtcacgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgat 120 Query: 142 tcgacagggagtacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttca 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tcgacagggagtacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttca 180 Query: 202 cctggggcatcttcaaccagccggacccctcagaccgcaggcccgccgatggcgacaccg 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cctggggcatcttcaaccagccggacccctcagaccgcaggcccgccgatggcgacaccg 240 Query: 262 tcaccctcgccgtccgcgacacgaacggcatcgcctccaccagcggcagcaccatcgagc 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tcaccctcgccgtccgcgacacgaacggcatcgcctccaccagcggcagcaccatcgagc 300 Query: 322 tcagcgcc 329 |||||||| Sbjct: 301 tcagcgcc 308
>ref|NM_197125.1| Oryza sativa (japonica cultivar-group) putative basic secretory protein (OSJNBa0051D19.25), mRNA Length = 690 Score = 141 bits (71), Expect = 2e-30 Identities = 175/210 (83%), Gaps = 6/210 (2%) Strand = Plus / Plus Query: 108 aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 167 ||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||| ||| Sbjct: 91 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 150 Query: 168 gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccggac 227 |||||||| |||||| | | || ||||||||||||||| ||||||||| ||||||| | Sbjct: 151 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccgagc 210 Query: 228 ccctcagaccgcaggcccgccgatggcgacaccgtcaccctcgccgtccgcgacacgaac 287 || | ||||| |||||| | |||| ||||| |||||||||||||||| || Sbjct: 211 gccgccgaccggaggccc------gtcgacgccgtcgtcctcgccgtccgcgacgtcgac 264 Query: 288 ggcatcgcctccaccagcggcagcaccatc 317 |||||||||||||||||||||| ||||||| Sbjct: 265 ggcatcgcctccaccagcggcaacaccatc 294
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 141 bits (71), Expect = 2e-30 Identities = 175/210 (83%), Gaps = 6/210 (2%) Strand = Plus / Minus Query: 108 aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 167 ||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||| ||| Sbjct: 87802 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 87743 Query: 168 gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccggac 227 |||||||| |||||| | | || ||||||||||||||| ||||||||| ||||||| | Sbjct: 87742 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccgagc 87683 Query: 228 ccctcagaccgcaggcccgccgatggcgacaccgtcaccctcgccgtccgcgacacgaac 287 || | ||||| |||||| | |||| ||||| |||||||||||||||| || Sbjct: 87682 gccgccgaccggaggccc------gtcgacgccgtcgtcctcgccgtccgcgacgtcgac 87629 Query: 288 ggcatcgcctccaccagcggcagcaccatc 317 |||||||||||||||||||||| ||||||| Sbjct: 87628 ggcatcgcctccaccagcggcaacaccatc 87599 Score = 61.9 bits (31), Expect = 1e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 93 acgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgattcgacagggag 152 |||||||| | ||||||| |||||||||||| |||||||| ||||| |||||| ||||| Sbjct: 92249 acgttcgatgcgacgaacacggcgtcgagcaccgccggcgggcagcggttcgaccgggag 92308 Query: 153 tacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttcacctggg 207 ||||| | |||||| ||||| |||||| | || || || ||||||| ||||| Sbjct: 92309 gtcggcgtggactacgcgaagcaggtgctcgccgacgcgtcgtccttcatctggg 92363 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 cggcatcgcctccaccagcggcagcacc 314 ||||| |||||||||||||||| ||||| Sbjct: 49754 cggcagcgcctccaccagcggctgcacc 49727 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 cggcatcgcctccaccagcggcagcacc 314 ||||| |||||||||||||||| ||||| Sbjct: 35182 cggcagcgcctccaccagcggctgcacc 35155
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 141 bits (71), Expect = 2e-30 Identities = 175/210 (83%), Gaps = 6/210 (2%) Strand = Plus / Plus Query: 108 aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 167 ||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||| ||| Sbjct: 18125326 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 18125385 Query: 168 gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccggac 227 |||||||| |||||| | | || ||||||||||||||| ||||||||| ||||||| | Sbjct: 18125386 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccgagc 18125445 Query: 228 ccctcagaccgcaggcccgccgatggcgacaccgtcaccctcgccgtccgcgacacgaac 287 || | ||||| |||||| | |||| ||||| |||||||||||||||| || Sbjct: 18125446 gccgccgaccggaggccc------gtcgacgccgtcgtcctcgccgtccgcgacgtcgac 18125499 Query: 288 ggcatcgcctccaccagcggcagcaccatc 317 |||||||||||||||||||||| ||||||| Sbjct: 18125500 ggcatcgcctccaccagcggcaacaccatc 18125529 Score = 61.9 bits (31), Expect = 1e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 93 acgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgattcgacagggag 152 |||||||| | ||||||| |||||||||||| |||||||| ||||| |||||| ||||| Sbjct: 18120879 acgttcgatgcgacgaacacggcgtcgagcaccgccggcgggcagcggttcgaccgggag 18120820 Query: 153 tacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttcacctggg 207 ||||| | |||||| ||||| |||||| | || || || ||||||| ||||| Sbjct: 18120819 gtcggcgtggactacgcgaagcaggtgctcgccgacgcgtcgtccttcatctggg 18120765 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 287 cggcatcgcctccaccagcggcagcacc 314 ||||| |||||||||||||||| ||||| Sbjct: 18177946 cggcagcgcctccaccagcggctgcacc 18177973 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 287 cggcatcgcctccaccagcggcagcacc 314 ||||| |||||||||||||||| ||||| Sbjct: 18163374 cggcagcgcctccaccagcggctgcacc 18163401
>dbj|AK100816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122C23, full insert sequence Length = 856 Score = 141 bits (71), Expect = 2e-30 Identities = 175/210 (83%), Gaps = 6/210 (2%) Strand = Plus / Plus Query: 108 aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 167 ||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||| ||| Sbjct: 111 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 170 Query: 168 gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccggac 227 |||||||| |||||| | | || ||||||||||||||| ||||||||| ||||||| | Sbjct: 171 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccgagc 230 Query: 228 ccctcagaccgcaggcccgccgatggcgacaccgtcaccctcgccgtccgcgacacgaac 287 || | ||||| |||||| | |||| ||||| |||||||||||||||| || Sbjct: 231 gccgccgaccggaggccc------gtcgacgccgtcgtcctcgccgtccgcgacgtcgac 284 Query: 288 ggcatcgcctccaccagcggcagcaccatc 317 |||||||||||||||||||||| ||||||| Sbjct: 285 ggcatcgcctccaccagcggcaacaccatc 314
>dbj|AK059607.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F02, full insert sequence Length = 852 Score = 141 bits (71), Expect = 2e-30 Identities = 175/210 (83%), Gaps = 6/210 (2%) Strand = Plus / Plus Query: 108 aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 167 ||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||| ||| Sbjct: 107 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 166 Query: 168 gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccggac 227 |||||||| |||||| | | || ||||||||||||||| ||||||||| ||||||| | Sbjct: 167 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccgagc 226 Query: 228 ccctcagaccgcaggcccgccgatggcgacaccgtcaccctcgccgtccgcgacacgaac 287 || | ||||| |||||| | |||| ||||| |||||||||||||||| || Sbjct: 227 gccgccgaccggaggccc------gtcgacgccgtcgtcctcgccgtccgcgacgtcgac 280 Query: 288 ggcatcgcctccaccagcggcagcaccatc 317 |||||||||||||||||||||| ||||||| Sbjct: 281 ggcatcgcctccaccagcggcaacaccatc 310
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 141 bits (71), Expect = 2e-30 Identities = 175/210 (83%), Gaps = 6/210 (2%) Strand = Plus / Plus Query: 108 aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 167 ||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||| ||| Sbjct: 18134579 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 18134638 Query: 168 gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccggac 227 |||||||| |||||| | | || ||||||||||||||| ||||||||| ||||||| | Sbjct: 18134639 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccgagc 18134698 Query: 228 ccctcagaccgcaggcccgccgatggcgacaccgtcaccctcgccgtccgcgacacgaac 287 || | ||||| |||||| | |||| ||||| |||||||||||||||| || Sbjct: 18134699 gccgccgaccggaggccc------gtcgacgccgtcgtcctcgccgtccgcgacgtcgac 18134752 Query: 288 ggcatcgcctccaccagcggcagcaccatc 317 |||||||||||||||||||||| ||||||| Sbjct: 18134753 ggcatcgcctccaccagcggcaacaccatc 18134782 Score = 61.9 bits (31), Expect = 1e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 93 acgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgattcgacagggag 152 |||||||| | ||||||| |||||||||||| |||||||| ||||| |||||| ||||| Sbjct: 18130132 acgttcgatgcgacgaacacggcgtcgagcaccgccggcgggcagcggttcgaccgggag 18130073 Query: 153 tacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttcacctggg 207 ||||| | |||||| ||||| |||||| | || || || ||||||| ||||| Sbjct: 18130072 gtcggcgtggactacgcgaagcaggtgctcgccgacgcgtcgtccttcatctggg 18130018 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 287 cggcatcgcctccaccagcggcagcacc 314 ||||| |||||||||||||||| ||||| Sbjct: 18187199 cggcagcgcctccaccagcggctgcacc 18187226 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 287 cggcatcgcctccaccagcggcagcacc 314 ||||| |||||||||||||||| ||||| Sbjct: 18172627 cggcagcgcctccaccagcggctgcacc 18172654
>ref|NM_197123.1| Oryza sativa (japonica cultivar-group) putative secretory protein (OSJNBa0051D19.13), mRNA Length = 702 Score = 61.9 bits (31), Expect = 1e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 93 acgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgattcgacagggag 152 |||||||| | ||||||| |||||||||||| |||||||| ||||| |||||| ||||| Sbjct: 79 acgttcgatgcgacgaacacggcgtcgagcaccgccggcgggcagcggttcgaccgggag 138 Query: 153 tacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttcacctggg 207 ||||| | |||||| ||||| |||||| | || || || ||||||| ||||| Sbjct: 139 gtcggcgtggactacgcgaagcaggtgctcgccgacgcgtcgtccttcatctggg 193
>emb|Y14202.1|HVY14202 Hordeum vulgare mRNA for hypothetical protein, clone pBH6-17 Length = 859 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 93 acgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgattcgaca 147 |||||||||| | ||||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 110 acgttcgacgcgtcgaacacggcgtcgggcaccgccggcggccagcgcttcgaca 164
>gb|U32431.1|TAU32431 Triticum aestivum mRNA, clone WCI-5, complete cds Length = 862 Score = 48.1 bits (24), Expect = 0.018 Identities = 51/60 (85%) Strand = Plus / Plus Query: 164 ctacgccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagcc 223 |||||||||||| |||||||| || || || ||||||| |||| || |||||||||||| Sbjct: 159 ctacgccaagcaggtgctctccgaggcctcgtccttcatctggaccaccttcaaccagcc 218
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 46.1 bits (23), Expect = 0.070 Identities = 35/39 (89%) Strand = Plus / Minus Query: 247 ccgatggcgacaccgtcaccctcgccgtccgcgacacga 285 ||||||||| |||| |||||||||||| ||||| ||||| Sbjct: 2117239 ccgatggcggcaccatcaccctcgccgcccgcgccacga 2117201
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 244 ccgccgatggcgacaccgtcaccctcgccg 273 |||||||||||||||||||| || |||||| Sbjct: 1205664 ccgccgatggcgacaccgtcgccgtcgccg 1205693
>ref|XM_601516.2| PREDICTED: Bos taurus similar to keratin 5b (LOC523221), mRNA Length = 1590 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tcctcctcctggccctggcag 75 ||||||||||||||||||||| Sbjct: 569 tcctcctcctggccctggcag 549
>emb|AL138741.13| Human DNA sequence from clone RP3-516D24 on chromosome 6, complete sequence Length = 67372 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 cctccttcacctggggcatct 213 ||||||||||||||||||||| Sbjct: 53555 cctccttcacctggggcatct 53575
>gb|AC093618.4| Homo sapiens BAC clone RP13-570B21 from 4, complete sequence Length = 9788 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 ttcctccttcacctggggcat 211 ||||||||||||||||||||| Sbjct: 1925 ttcctccttcacctggggcat 1905
>gb|AC006287.1|AC006287 Homo sapiens, clone hRPK.22_A_1, complete sequence Length = 176153 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 ttcctccttcacctggggcat 211 ||||||||||||||||||||| Sbjct: 76 ttcctccttcacctggggcat 96
>emb|X99395.1|MMENOGD M.musculus gene encoding endonuclease G Length = 3525 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 cgcagcagccgctgtcctcct 61 ||||||||||||||||||||| Sbjct: 2576 cgcagcagccgctgtcctcct 2556
>ref|NM_197135.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner envelope protein (OSJNBa0051D19.5), mRNA Length = 1692 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 cggcatcgcctccaccagcggcagcacc 314 ||||| |||||||||||||||| ||||| Sbjct: 207 cggcagcgcctccaccagcggctgcacc 180
>ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner envelope protein (OSJNBa0051D19.7), mRNA Length = 2967 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 cggcatcgcctccaccagcggcagcacc 314 ||||| |||||||||||||||| ||||| Sbjct: 261 cggcagcgcctccaccagcggctgcacc 234
>ref|NM_001001534.1| Sus scrofa ryanodine receptor 1 (RYR1), mRNA Length = 15378 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 12750 ctccttcacctggggcatct 12731
>ref|NM_189375.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1071 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 cgacaccgtcaccctcgccgtccgcgac 281 ||||| |||||||||||||| ||||||| Sbjct: 402 cgacatcgtcaccctcgccgcccgcgac 429
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 acagggagtacggcgccgcc 164 |||||||||||||||||||| Sbjct: 2906611 acagggagtacggcgccgcc 2906592
>ref|XM_582026.2| PREDICTED: Bos taurus similar to ryanodine receptor 1, skeletal muscle (LOC505697), mRNA Length = 9500 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 6882 ctccttcacctggggcatct 6863
>ref|NM_009419.2| Mus musculus protein-tyrosine sulfotransferase 2 (Tpst2), mRNA Length = 1829 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 247 gagcacagccggcggccagc 228
>gb|BC003721.1| Mus musculus protein-tyrosine sulfotransferase 2, mRNA (cDNA clone MGC:5752 IMAGE:3494892), complete cds Length = 1829 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 247 gagcacagccggcggccagc 228
>ref|NM_000540.1| Homo sapiens ryanodine receptor 1 (skeletal) (RYR1), mRNA Length = 15359 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 12763 ctccttcacctggggcatct 12744
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 acagggagtacggcgccgcc 164 |||||||||||||||||||| Sbjct: 60415 acagggagtacggcgccgcc 60396
>gb|AC123848.4| Mus musculus BAC clone RP23-459I1 from chromosome 5, complete sequence Length = 184292 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 107087 gagcacagccggcggccagc 107106
>ref|NM_009109.1| Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA Length = 15358 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 12781 ctccttcacctggggcatct 12762
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cctccaccagcggcagcacc 314 |||||||||||||||||||| Sbjct: 133262 cctccaccagcggcagcacc 133243
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ccgatggcgacaccgtcacc 266 |||||||||||||||||||| Sbjct: 1885392 ccgatggcgacaccgtcacc 1885373
>gb|AC008133.7| Homo sapiens chromosome 17, clone RP11-40A13, complete sequence Length = 179744 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cctcctggccctggcagcca 78 |||||||||||||||||||| Sbjct: 145807 cctcctggccctggcagcca 145788
>dbj|AK150082.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530127A14 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1767 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 219 gagcacagccggcggccagc 200
>gb|AC093690.5| Homo sapiens BAC clone RP11-731I19 from 2, complete sequence Length = 201467 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 cactcaccaaggcacccaga 22 |||||||||||||||||||| Sbjct: 189405 cactcaccaaggcacccaga 189424
>dbj|AK149502.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730026M21 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1778 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 219 gagcacagccggcggccagc 200
>dbj|AK149379.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730003F03 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1608 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 260 gagcacagccggcggccagc 241
>dbj|AK163461.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230119D01 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1716 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 220 gagcacagccggcggccagc 201
>gb|AC025898.10| Homo sapiens chromosome 17, clone RP11-421O15, complete sequence Length = 184875 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cctcctggccctggcagcca 78 |||||||||||||||||||| Sbjct: 46967 cctcctggccctggcagcca 46948
>gb|AY268935.1| Mus musculus ryanodine receptor (Ryr1) mRNA, complete cds Length = 15358 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 12781 ctccttcacctggggcatct 12762
>dbj|AK036436.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830107O18 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1742 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 185 gagcacagccggcggccagc 166
>gb|M91452.1|PIGRYRN Sus scrofa Yorkshire ryanodine receptor (RYR1) mRNA, complete cds Length = 15378 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 12750 ctccttcacctggggcatct 12731
>gb|M91451.1|PIGRYRMH Sus scrofa Belgisch Landras/Pietrain ryanodine receptor (RYR1) mRNA, complete cds Length = 15378 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 12750 ctccttcacctggggcatct 12731
>dbj|AK075672.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110062A05 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1812 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 256 gagcacagccggcggccagc 237
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 cgacaccgtcaccctcgccgtccgcgac 281 ||||| |||||||||||||| ||||||| Sbjct: 42434483 cgacatcgtcaccctcgccgcccgcgac 42434510
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 cgacaccgtcaccctcgccgtccgcgac 281 ||||| |||||||||||||| ||||||| Sbjct: 93821 cgacatcgtcaccctcgccgcccgcgac 93848
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 cggcatcgcctccaccagcggcag 310 |||||||||||||| ||||||||| Sbjct: 4357064 cggcatcgcctccagcagcggcag 4357041
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 gccgatggcgacaccgtcaccctc 269 ||||| |||||||||||||||||| Sbjct: 655871 gccgaaggcgacaccgtcaccctc 655848
>ref|XM_341818.2| PREDICTED: Rattus norvegicus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA Length = 3621 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 1043 ctccttcacctggggcatct 1024
>dbj|AK120578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135E03, full insert sequence Length = 1669 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 cggcatcgcctccaccagcggcagcacc 314 ||||| |||||||||||||||| ||||| Sbjct: 251 cggcagcgcctccaccagcggctgcacc 224
>dbj|AK109480.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A07, full insert sequence Length = 1294 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 cgacaccgtcaccctcgccgtccgcgac 281 ||||| |||||||||||||| ||||||| Sbjct: 464 cgacatcgtcaccctcgccgcccgcgac 491
>dbj|AK104277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-A06, full insert sequence Length = 1229 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 cgacaccgtcaccctcgccgtccgcgac 281 ||||| |||||||||||||| ||||||| Sbjct: 425 cgacatcgtcaccctcgccgcccgcgac 452
>dbj|AK102172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086I12, full insert sequence Length = 1286 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 cgacaccgtcaccctcgccgtccgcgac 281 ||||| |||||||||||||| ||||||| Sbjct: 465 cgacatcgtcaccctcgccgcccgcgac 492
>gb|DQ339154.1| Bacillus pumilus ribonuclease precursor, gene, complete cds Length = 622 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 caagcaagtgctctcggatg 189 |||||||||||||||||||| Sbjct: 374 caagcaagtgctctcggatg 393
>dbj|AK061131.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-A02, full insert sequence Length = 1277 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 cgacaccgtcaccctcgccgtccgcgac 281 ||||| |||||||||||||| ||||||| Sbjct: 466 cgacatcgtcaccctcgccgcccgcgac 493
>tpe|BN000551.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx22 gene for class III peroxidase 22 precursor, exon 1 Length = 1071 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 cgacaccgtcaccctcgccgtccgcgac 281 ||||| |||||||||||||| ||||||| Sbjct: 402 cgacatcgtcaccctcgccgcccgcgac 429
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ccgatggcgacaccgtcacc 266 |||||||||||||||||||| Sbjct: 1906259 ccgatggcgacaccgtcacc 1906240
>gb|AF049890.1|AF049890 Mus musculus tyrosylprotein sulfotransferase-2 mRNA, complete cds Length = 1760 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 202 gagcacagccggcggccagc 183
>gb|AC151475.1| Mus musculus BAC clone RP23-283P1 from 5, complete sequence Length = 171663 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gagcacagccggcggccagc 138 |||||||||||||||||||| Sbjct: 167089 gagcacagccggcggccagc 167108
>dbj|AB209425.1| Homo sapiens mRNA for ryanodine receptor 1 (skeletal) variant protein Length = 6266 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 6005 ctccttcacctggggcatct 5986
>emb|X78666.1|MMBRYR1 M.musculus (BALB/c) Ryr1 mRNA Length = 620 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 316 ctccttcacctggggcatct 297
>gb|J05200.1|HUMRYR Human ryanodine receptor mRNA, complete cds Length = 15346 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 12720 ctccttcacctggggcatct 12701
>emb|X62880.1|SSCRCRNA S.scrofa mRNA for calcium release channel (CRC) Length = 15253 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctccttcacctggggcatct 213 |||||||||||||||||||| Sbjct: 12618 ctccttcacctggggcatct 12599 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,390,245 Number of Sequences: 3902068 Number of extensions: 2390245 Number of successful extensions: 64279 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63700 Number of HSP's gapped (non-prelim): 573 length of query: 329 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 307 effective length of database: 17,147,199,772 effective search space: 5264190330004 effective search space used: 5264190330004 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)