ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet59b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYB_THEPA (Q36099) Cytochrome b 30 1.7
2Y006_RICPR (Q9ZED6) Hypothetical protein RP006 28 8.6

>CYB_THEPA (Q36099) Cytochrome b|
          Length = 363

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 12  FFSFVGPRAGHFYSALSLAWQWPRGRVLLLLITVCA 119
           FF F+    G +YS+  + W W  G V+L+L  V A
Sbjct: 82  FFMFIHIIKGMWYSSKYMPWSWYSGIVILILSIVIA 117



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>Y006_RICPR (Q9ZED6) Hypothetical protein RP006|
          Length = 706

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 95  AASDHRVC*SIRRACAEQQQEPL 163
           AA+ HR+C    +AC  Q+Q+P+
Sbjct: 3   AATGHRICNDCSKACIYQKQDPV 25


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,010,121
Number of Sequences: 219361
Number of extensions: 258371
Number of successful extensions: 523
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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