| Clone Name | baet59b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|CP000147.1| Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence Length = 100828 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ccaccaccacctcgcgctcgc 32 ||||||||||||||||||||| Sbjct: 53590 ccaccaccacctcgcgctcgc 53570
>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence Length = 170975 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gaggtcgatcgggatggcgg 197 |||||||||||||||||||| Sbjct: 72792 gaggtcgatcgggatggcgg 72773
>emb|AL356059.27| Human DNA sequence from clone RP11-192G4 on chromosome 1 Contains part of the COL24A1 gene for collagen type XXIV alpha 1, complete sequence Length = 76418 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 cagcagatatttactcagtctctg 60 ||||||||||||||| |||||||| Sbjct: 50514 cagcagatatttacttagtctctg 50491
>emb|AL022576.2|HS20J23 Human DNA sequence from clone RP1-20J23 on chromosome Xq26.2-27.2 Contains a ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1) pseudogene (LOC286472) and a CpG island, complete sequence Length = 137111 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cactacacttactgtggtct 131 |||||||||||||||||||| Sbjct: 127564 cactacacttactgtggtct 127583
>gb|AY057373.1| Drosophila melanogaster innexin6 (inx6) mRNA, complete cds Length = 1493 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gaggtcgatcgggatggcgg 197 |||||||||||||||||||| Sbjct: 269 gaggtcgatcgggatggcgg 288
>ref|NM_132146.1| Drosophila melanogaster inx6 CG17063-RA (inx6), mRNA Length = 1446 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gaggtcgatcgggatggcgg 197 |||||||||||||||||||| Sbjct: 235 gaggtcgatcgggatggcgg 254
>gb|AC041040.6| Homo sapiens chromosome 8, clone RP11-513O13, complete sequence Length = 155301 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 tggtgcactgcacaagatcgcacc 82 ||||||||||||| |||||||||| Sbjct: 69663 tggtgcactgcacgagatcgcacc 69686
>gb|AE003572.4| Drosophila melanogaster chromosome X, section 67 of 74 of the complete sequence Length = 91383 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gaggtcgatcgggatggcgg 197 |||||||||||||||||||| Sbjct: 41346 gaggtcgatcgggatggcgg 41327
>emb|AL844561.5| Mouse DNA sequence from clone RP23-214D2 on chromosome 2, complete sequence Length = 203361 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gctcggcagcagatatttac 50 |||||||||||||||||||| Sbjct: 14177 gctcggcagcagatatttac 14158 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,607,356 Number of Sequences: 3902068 Number of extensions: 1607356 Number of successful extensions: 126866 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 126848 Number of HSP's gapped (non-prelim): 18 length of query: 206 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 184 effective length of database: 17,147,199,772 effective search space: 3155084758048 effective search space used: 3155084758048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)