>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 98     gcgcgcaaggtggtgatggtgaccg 122
              ||||||| |||||||||||||||||
Sbjct: 390444 gcgcgcacggtggtgatggtgaccg 390468

>ref|XM_476659.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  ctccactgcactgccggcca 96
           ||||||||||||||||||||
Sbjct: 663 ctccactgcactgccggcca 644

>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     acgcctccgcccacgcccgc 36
              ||||||||||||||||||||
Sbjct: 227674 acgcctccgcccacgcccgc 227693

>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBa0094J09, complete sequence
          Length = 168192

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    cgcctccgcccacgcccgcc 37
             ||||||||||||||||||||
Sbjct: 73856 cgcctccgcccacgcccgcc 73875

>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence
          Length = 235276

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     ctgccggccacgcgcgcaag 106
              ||||||||||||||||||||
Sbjct: 108183 ctgccggccacgcgcgcaag 108164

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 18       cgcctccgcccacgcccgcc 37
                ||||||||||||||||||||
Sbjct: 12274700 cgcctccgcccacgcccgcc 12274719

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 77      ctccactgcactgccggcca 96
               ||||||||||||||||||||
Sbjct: 2750177 ctccactgcactgccggcca 2750158

>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1364A02
          Length = 137933

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    ctccactgcactgccggcca 96
             ||||||||||||||||||||
Sbjct: 53738 ctccactgcactgccggcca 53719

>gb|AE005005.1| Halobacterium sp. NRC-1 section 36 of 170 of the complete genome
          Length = 10570

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  gggtcgctgccgccgggcga 201
            ||||||||||||||||||||
Sbjct: 2700 gggtcgctgccgccgggcga 2681

>dbj|AP003704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1048_C10
          Length = 99194

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    ctccactgcactgccggcca 96
             ||||||||||||||||||||
Sbjct: 57188 ctccactgcactgccggcca 57169

>dbj|AB073227.1| Sphingomonas paucimobilis protocatechuate 4,5-cleavage pathway gene
            cluster, complete cds
          Length = 10825

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   gcactgccggccacgcgcgc 103
            ||||||||||||||||||||
Sbjct: 4249 gcactgccggccacgcgcgc 4268

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 18       cgcctccgcccacgcccgcc 37
                ||||||||||||||||||||
Sbjct: 12282040 cgcctccgcccacgcccgcc 12282059


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,216,296
Number of Sequences: 3902068
Number of extensions: 1216296
Number of successful extensions: 104098
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103770
Number of HSP's gapped (non-prelim): 328
length of query: 205
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 183
effective length of database: 17,147,199,772
effective search space: 3137937558276
effective search space used: 3137937558276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)