ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet59a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for ... 573 e-160
2gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome... 161 1e-36
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 161 1e-36
4dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
5dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 161 1e-36
7dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 4e-34
8gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein... 88 2e-14
9gb|AY105650.1| Zea mays PCO135935 mRNA sequence 80 4e-12
10gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein... 76 7e-11
11ref|XM_368803.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 46 0.061
12gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 44 0.24
13emb|Y14197.2|RSY14197 Rhodobacter sphaeroides uptake hydrogenase... 44 0.24
14gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome 42 0.96
15gb|AY111693.1| Zea mays CL6746_1 mRNA sequence 42 0.96
16gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 3.8
17gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcom... 40 3.8
18ref|XM_527798.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 3.8
19gb|AC163335.6| Mus musculus chromosome 7, clone RP24-149G13, com... 40 3.8
20emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 3.8
21emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 3.8
22gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete... 40 3.8
23gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, compl... 40 3.8
24gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 3.8
25emb|AL133473.5| Human DNA sequence from clone RP1-236A3 on chrom... 40 3.8
26emb|AL096774.9|HSDJ144C9 Human DNA sequence from clone RP1-144C9... 40 3.8
27gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 3.8
28gb|AE011785.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 3.8
29gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, comp... 40 3.8
30gb|AF159555.1| Eastern equine encephalomyelitis virus isolate TX... 40 3.8
31dbj|AK047546.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 3.8
32gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, com... 40 3.8
33gb|AC154749.2| Mus musculus BAC clone RP24-399C21 from 17, compl... 40 3.8
34dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 3.8 
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b
           binding (CAB) protein of photosystem II (PSII)
          Length = 2689

 Score =  573 bits (289), Expect = e-160
 Identities = 289/289 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   acccatcacatcctcccttcctgctgagctgagcacgcccctctgctgcacgccccttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 acccatcacatcctcccttcctgctgagctgagcacgcccctctgctgcacgccccttct 750

                                                                       
Query: 61  ccctcccaaccttgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ccctcccaaccttgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcac 810

                                                                       
Query: 121 ccggctcgacttcgccggctcctccaggtatgccacagcggcgccgactgccggcgcgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ccggctcgacttcgccggctcctccaggtatgccacagcggcgccgactgccggcgcgca 870

                                                                       
Query: 181 gaagatcgtctccctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gaagatcgtctccctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgc 930

                                                            
Query: 241 gcccgtggccacctcgagcgccggcatcgacgacgaactcgccaagtgg 289
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 gcccgtggccacctcgagcgccggcatcgacgacgaactcgccaagtgg 979
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>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0091I11, complete sequence
          Length = 135993

 Score =  161 bits (81), Expect = 1e-36
 Identities = 182/217 (83%), Gaps = 9/217 (4%)
 Strand = Plus / Plus

                                                                         
Query: 73    tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
             ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 38104 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 38163

                                                                         
Query: 133   cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
             ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 38164 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 38223

                                                                         
Query: 193   cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 252
             |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 38224 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 38274

                                                  
Query: 253   ctcgagcgccggcatcgacgacgaactcgccaagtgg 289
             ||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 38275 ctcgagccccgacatcggcgatgagctcgccaagtgg 38311
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  161 bits (81), Expect = 1e-36
 Identities = 182/217 (83%), Gaps = 9/217 (4%)
 Strand = Plus / Plus

                                                                           
Query: 73      tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
               ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 7579018 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 7579077

                                                                           
Query: 133     cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
               ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 7579078 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 7579137

                                                                           
Query: 193     cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 252
               |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 7579138 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 7579188

                                                    
Query: 253     ctcgagcgccggcatcgacgacgaactcgccaagtgg 289
               ||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 7579189 ctcgagccccgacatcggcgatgagctcgccaagtgg 7579225
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>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full
           insert sequence
          Length = 1101

 Score =  161 bits (81), Expect = 1e-36
 Identities = 182/217 (83%), Gaps = 9/217 (4%)
 Strand = Plus / Plus

                                                                       
Query: 73  tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
           ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 68  tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 127

                                                                       
Query: 133 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
           ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 128 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 187

                                                                       
Query: 193 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 252
           |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 188 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 238

                                                
Query: 253 ctcgagcgccggcatcgacgacgaactcgccaagtgg 289
           ||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 239 ctcgagccccgacatcggcgatgagctcgccaagtgg 275
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>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full
           insert sequence
          Length = 1186

 Score =  161 bits (81), Expect = 1e-36
 Identities = 182/217 (83%), Gaps = 9/217 (4%)
 Strand = Plus / Plus

                                                                       
Query: 73  tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
           ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 79  tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 138

                                                                       
Query: 133 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
           ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 139 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 198

                                                                       
Query: 193 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 252
           |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 199 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 249

                                                
Query: 253 ctcgagcgccggcatcgacgacgaactcgccaagtgg 289
           ||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 250 ctcgagccccgacatcggcgatgagctcgccaagtgg 286
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  161 bits (81), Expect = 1e-36
 Identities = 182/217 (83%), Gaps = 9/217 (4%)
 Strand = Plus / Plus

                                                                           
Query: 73      tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
               ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 7649105 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 7649164

                                                                           
Query: 133     cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
               ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 7649165 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 7649224

                                                                           
Query: 193     cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 252
               |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 7649225 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 7649275

                                                    
Query: 253     ctcgagcgccggcatcgacgacgaactcgccaagtgg 289
               ||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 7649276 ctcgagccccgacatcggcgatgagctcgccaagtgg 7649312
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>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full
           insert sequence
          Length = 1157

 Score =  153 bits (77), Expect = 4e-34
 Identities = 181/217 (83%), Gaps = 9/217 (4%)
 Strand = Plus / Plus

                                                                       
Query: 73  tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 132
           ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 78  tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 137

                                                                       
Query: 133 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 192
           ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 138 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 197

                                                                       
Query: 193 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 252
           |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 198 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 248

                                                
Query: 253 ctcgagcgccggcatcgacgacgaactcgccaagtgg 289
           ||||||| ||| ||||| ||| || |||||| |||||
Sbjct: 249 ctcgagccccgacatcggcgatgagctcgccgagtgg 285
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>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA,
           complete cds
          Length = 1073

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                       
Query: 84  caatggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcct 143
           |||||||||||||||||||  ||||||| || ||||||| |||| |||||||||||||||
Sbjct: 30  caatggcggcgctcgctccatccaagattctgggcacccagctcaacttcgccggctcct 89

                                                               
Query: 144 ccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccct 195
           || | || ||||| || ||||| || || || || |||||||| ||||||||
Sbjct: 90  cccgctacgccaccgcagcgcccaccgcgggggctcagaagattgtctccct 141
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>gb|AY105650.1| Zea mays PCO135935 mRNA sequence
          Length = 1366

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 84  caatggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcct 143
           |||||||||||||||||||  ||||||| || ||||||| |||| ||||||| |||||||
Sbjct: 174 caatggcggcgctcgctccatccaagattctgggcacccagctcaacttcgcgggctcct 233

                                                               
Query: 144 ccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccct 195
           || | || ||||| || ||||| || || || || |||||||| ||||||||
Sbjct: 234 cccgctacgccaccgcagcgcccaccgcgggggctcagaagattgtctccct 285
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>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA,
           complete cds
          Length = 957

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                       
Query: 86  atggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcctcc 145
           |||||||| || |||||  ||||||| || ||||||  |||| |||||||||||||||||
Sbjct: 34  atggcggctcttgctccatccaagattctgggcaccaagctcaacttcgccggctcctcc 93

                                                                 
Query: 146 aggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccctcttc 199
            | || ||||| || ||||| || || || || |||||||||||||||||||||
Sbjct: 94  cgctacgccaccgcagcgcccaccgcgggggctcagaagatcgtctccctcttc 147
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>ref|XM_368803.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00441.4) partial mRNA
          Length = 612

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 243 ccgtggccacctcgagcgccggc 265
           |||||||||||||||||||||||
Sbjct: 331 ccgtggccacctcgagcgccggc 309
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 223     cccgaagccgaagcccgcgccc 244
               ||||||||||||||||||||||
Sbjct: 2412357 cccgaagccgaagcccgcgccc 2412336
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>emb|Y14197.2|RSY14197 Rhodobacter sphaeroides uptake hydrogenase operon
          Length = 11280

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 224  ccgaagccgaagcccgcgcccg 245
            ||||||||||||||||||||||
Sbjct: 4368 ccgaagccgaagcccgcgcccg 4347
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>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 226   gaagccgaagcccgcgcccgt 246
             |||||||||||||||||||||
Sbjct: 29859 gaagccgaagcccgcgcccgt 29839
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>gb|AY111693.1| Zea mays CL6746_1 mRNA sequence
          Length = 1026

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 gcctgccccgaagccgaagcc 237
           |||||||||||||||||||||
Sbjct: 465 gcctgccccgaagccgaagcc 485
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cggctcctccaggtatgcca 155
              ||||||||||||||||||||
Sbjct: 333603 cggctcctccaggtatgcca 333622
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>gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcomycin biosynthetic gene
             cluster, partial sequence
          Length = 85915

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   gaagccgaagcccgcgcccg 245
             ||||||||||||||||||||
Sbjct: 68883 gaagccgaagcccgcgcccg 68902
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>ref|XM_527798.1| PREDICTED: Pan troglodytes similar to hypothetical protein
           (LOC472424), mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 23  gctgagctgagcacgcccctctgc 46
           ||||||||||||||| ||||||||
Sbjct: 450 gctgagctgagcacgaccctctgc 427
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>gb|AC163335.6| Mus musculus chromosome 7, clone RP24-149G13, complete sequence
          Length = 164660

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      cccatcacatcctcccttcc 21
              ||||||||||||||||||||
Sbjct: 150209 cccatcacatcctcccttcc 150190
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 237     ccgcgcccgtggccacctcg 256
               ||||||||||||||||||||
Sbjct: 1783493 ccgcgcccgtggccacctcg 1783474
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 213     agaagcctgccccgaagccg 232
               ||||||||||||||||||||
Sbjct: 1342884 agaagcctgccccgaagccg 1342865
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>gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete sequence
          Length = 150332

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    gctgagctgagcacgcccctctgc 46
             ||||||||||||||| ||||||||
Sbjct: 62037 gctgagctgagcacgaccctctgc 62060
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>gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, complete sequence
          Length = 178050

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    gctgagctgagcacgcccctctgc 46
             ||||||||||||||| ||||||||
Sbjct: 33553 gctgagctgagcacgaccctctgc 33576
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     ccgaagccgaagcccgcgcc 243
               ||||||||||||||||||||
Sbjct: 2226819 ccgaagccgaagcccgcgcc 2226800
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>emb|AL133473.5| Human DNA sequence from clone RP1-236A3 on chromosome 6 Contains the 3'
             end of the gene for phenylalanine-tRNA synthetase (FARS1),
             complete sequence
          Length = 57423

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   acaagaagcctgccccgaag 229
             ||||||||||||||||||||
Sbjct: 38602 acaagaagcctgccccgaag 38583
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>emb|AL096774.9|HSDJ144C9 Human DNA sequence from clone RP1-144C9 on chromosome 1p34.3-36.11
             Contains the gene for a novel protein, a ribosomal protein
             S24 (RPS24) pseudogene, the GPR3 gene for G
             protein-coupled receptor 3 and the 3' end of the WASF2
             gene for WAS protein family, member 2, complete sequence
          Length = 77322

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    ctgctgcacgccccttctcc 62
             ||||||||||||||||||||
Sbjct: 27561 ctgctgcacgccccttctcc 27542
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    catcgacgacgaactcgcca 284
              ||||||||||||||||||||
Sbjct: 713736 catcgacgacgaactcgcca 713717
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>gb|AE011785.1| Xanthomonas axonopodis pv. citri str. 306,  section 163 of 469 of the
            complete genome
          Length = 11903

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 237  ccgcgcccgtggccacctcg 256
            ||||||||||||||||||||
Sbjct: 8873 ccgcgcccgtggccacctcg 8854
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>gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, complete sequence
          Length = 197191

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    ccccttctccctcccaaccttggg 76
             |||||||||| |||||||||||||
Sbjct: 70853 ccccttctccttcccaaccttggg 70830
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>gb|AF159555.1| Eastern equine encephalomyelitis virus isolate TX95-PV5-2547
           structural polyprotein gene, complete cds
          Length = 4114

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 211 caagaagcctgccccgaagccgaagcccgcgc 242
           |||||||||||| || ||||| ||||||||||
Sbjct: 262 caagaagcctgcgcccaagcctaagcccgcgc 293
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>dbj|AK047546.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930086K23 product:inferred:
           ORF2 consensus sequence encoding endonuclease and
           reverse transcriptase minus RNaseH {Rattus norvegi, full
           insert sequence
          Length = 3901

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 2   cccatcacatcctcccttcc 21
           ||||||||||||||||||||
Sbjct: 557 cccatcacatcctcccttcc 576
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>gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, complete sequence
          Length = 200177

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      cccatcacatcctcccttcc 21
              ||||||||||||||||||||
Sbjct: 178280 cccatcacatcctcccttcc 178299
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>gb|AC154749.2| Mus musculus BAC clone RP24-399C21 from 17, complete sequence
          Length = 155483

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     ctcccttcctgctgagctga 32
              ||||||||||||||||||||
Sbjct: 137483 ctcccttcctgctgagctga 137502
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 237     ccgcgcccgtggccacctcg 256
               ||||||||||||||||||||
Sbjct: 1736444 ccgcgcccgtggccacctcg 1736425


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,112,711
Number of Sequences: 3902068
Number of extensions: 2112711
Number of successful extensions: 48769
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48298
Number of HSP's gapped (non-prelim): 471
length of query: 289
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 267
effective length of database: 17,147,199,772
effective search space: 4578302339124
effective search space used: 4578302339124
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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