ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet59a09 |
|---|---|
| Clone Library Name | barley_pub |
>P1_ARATH (Q39172) Probable NADP-dependent oxidoreductase P1 (EC 1.3.1.74)| Length = 345 Score = 63.9 bits (154), Expect = 1e-10 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 4/73 (5%) Frame = +1 Query: 100 SRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDG--SVLVKNLYLSCDPYMRPKMSR--PL 267 +++V+LKDYV G+PTE+ + +G SVLVKNLYLSCDPYMR +M + P Sbjct: 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPS 64 Query: 268 HQSYTAAFVPGAP 306 + A+ PG P Sbjct: 65 TAALAQAYTPGQP 77
>P2_ARATH (Q39173) Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74)| Length = 343 Score = 60.5 bits (145), Expect = 1e-09 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 3/72 (4%) Frame = +1 Query: 100 SRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGS--VLVKNLYLSCDPYMRPKMSRPLHQ 273 +++V+ KD+V G+P E+ +GS VLVKNLYLSCDPYMR +M +P Sbjct: 4 NKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMGKPDPS 63 Query: 274 SYTA-AFVPGAP 306 S A A+ PG P Sbjct: 64 SALAQAYAPGKP 75
>LTB4D_RAT (P97584) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (Dithiolethione-inducible gene 1 protein) (D3T-inducible gene 1 protein) (DIG-1) Length = 329 Score = 39.7 bits (91), Expect = 0.002 Identities = 19/51 (37%), Positives = 33/51 (64%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 ++++ LK + EG+PT+++ EL + +G VL++ L+LS DPYMR Sbjct: 2 VQAKTWTLKKHFEGFPTDSNFELR-TTELPPLNNGEVLLEALFLSVDPYMR 51
>LTB4D_MOUSE (Q91YR9) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 39.7 bits (91), Expect = 0.002 Identities = 19/51 (37%), Positives = 32/51 (62%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 ++++ LK + EG+PT+ + EL + +G VL++ L+LS DPYMR Sbjct: 2 VQAKSWTLKKHFEGFPTDGNFEL-KTTELPPLNNGEVLLEALFLSVDPYMR 51
>LTB4D_HUMAN (Q14914) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 38.9 bits (89), Expect = 0.003 Identities = 20/56 (35%), Positives = 33/56 (58%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSR 261 ++++ LK + GYPT + EL A + ++G VL++ L+L+ DPYMR R Sbjct: 2 VRTKTWTLKKHFVGYPTNSDFEL-KTAELPPLKNGEVLLEALFLTVDPYMRVAAKR 56
>LTB4D_CAVPO (Q9EQZ5) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (LTB4) (12-HD) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (PGR) Length = 329 Score = 38.1 bits (87), Expect = 0.006 Identities = 19/51 (37%), Positives = 32/51 (62%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 +K++ LK + +G PT++ EL + ++G VL++ L+LS DPYMR Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFEL-KTVELPPLKNGEVLLEALFLSVDPYMR 51
>ZADH1_MOUSE (Q8VDQ1) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 37.7 bits (86), Expect = 0.007 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = +1 Query: 103 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 276 +RVVL G P + + + +D +G V V+ LYLS DPYMR KM+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRVEEFSLLDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTD 63 Query: 277 YTA 285 Y A Sbjct: 64 YLA 66
>LTB4D_RABIT (Q28719) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (ADRAB-F) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 349 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/51 (35%), Positives = 31/51 (60%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 ++++ LK + G+PT++ EL + +G VL++ L+LS DPYMR Sbjct: 2 VRAKNWTLKKHFHGHPTDSDFEL-KTVELPPLNNGEVLLEALFLSVDPYMR 51
>LTB4D_PIG (Q29073) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 37.4 bits (85), Expect = 0.010 Identities = 18/51 (35%), Positives = 32/51 (62%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 ++++ LK + GYPT ++ EL + ++G VL++ L+L+ DPYMR Sbjct: 2 VRAKSWTLKKHFVGYPTPSNFEL-KTVELPPLKNGEVLLEALFLTVDPYMR 51
>YNCB_ECOLI (P76113) Putative NADP-dependent oxidoreductase yncB (EC 1.-.-.-)| Length = 353 Score = 35.8 bits (81), Expect = 0.028 Identities = 21/54 (38%), Positives = 29/54 (53%) Frame = +1 Query: 97 KSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMS 258 ++RR VL G P + L V +G VL++ +YLS DPYMR +MS Sbjct: 15 RNRRWVLASRPHGAPVPENFRL-EEDDVATPGEGQVLLRTVYLSLDPYMRGRMS 67
>ZADH1_PONPY (Q5R806) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 34.7 bits (78), Expect = 0.062 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = +1 Query: 103 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 276 +RVVL G P + + D +G V V+ LYLS DPYMR +M+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD 63 Query: 277 Y 279 Y Sbjct: 64 Y 64
>ZADH1_HUMAN (Q8N8N7) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 34.7 bits (78), Expect = 0.062 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = +1 Query: 103 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 276 +RVVL G P + + D +G V V+ LYLS DPYMR +M+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD 63 Query: 277 Y 279 Y Sbjct: 64 Y 64
>MYO1A_MOUSE (O88329) Myosin Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I| heavy chain) (MIHC) (Fragment) Length = 909 Score = 29.6 bits (65), Expect = 2.0 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +1 Query: 73 RRRSMAELKSRRVVLKD-YVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 R S K++ +LK + EG P EA ++ P A +VL+KNLY Y+R Sbjct: 529 RDLSQTMWKAQHPLLKSLFPEGNPKEASLKRPPTAGTQFKNSVAVLMKNLYSKNPNYIR 587
>ASK1_ASHGO (Q75DE8) DASH complex subunit ASK1 (Outer kinetochore protein ASK1)| (Associated with spindles and kinetochores protein 1) Length = 181 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Frame = +1 Query: 142 TEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSY----TAAFVPGAPS 309 TE H+ +P + DE +DGS L + + R K+S L Q Y +++FV +P+ Sbjct: 102 TEGHVLAVPVSSDDEPDDGSTLQRQ-------HKRRKLSLQLQQRYGSSSSSSFVSRSPT 154
>MOLR_ECOLI (P33345) Molybdate metabolism regulator| Length = 1264 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +1 Query: 49 ARSPVHPRRRRSMAELKSRRVVLKDYVEGYPTEAHMELLPAAP--VDEAEDGS 201 A S + P R+ +LK+ R + ++ YP A LLPAAP EA+D + Sbjct: 678 AASELAPAVARAFNKLKTLRENARSWLLKYPEHALTGLLPAAPGKAGEAQDNA 730
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3| (ERIC-1) Length = 838 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/79 (21%), Positives = 35/79 (44%) Frame = +1 Query: 67 PRRRRSMAELKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 P ++ L+ + +D E T A ++ L ++ ++ ++LYL DP +R Sbjct: 509 PTHQQGQPALELKEESFRDPAEVLGTGAEVDYLEQFGTSSFKESALRKQSLYLKFDPLLR 568 Query: 247 PKMSRPLHQSYTAAFVPGA 303 RP+ + + + GA Sbjct: 569 DSPGRPVPVATETSSMHGA 587
>VE1_HPV12 (Q05134) Replication protein E1 (EC 3.6.1.-) (ATP-dependent| helicase E1) Length = 604 Score = 28.5 bits (62), Expect = 4.5 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 1/89 (1%) Frame = +1 Query: 28 SVALHRLARSPVHPRRRRSMAELKSR-RVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSV 204 S L ++ SP +RR AE S + L + E E + + + PVDE G++ Sbjct: 89 SPRLESISLSPQQKSKRRLFAEQDSGLELSLNNEAEDVSPEVEVPAIDSRPVDEGGSGAI 148 Query: 205 LVKNLYLSCDPYMRPKMSRPLHQSYTAAF 291 + L L ++ + +S+ F Sbjct: 149 DIDYLSLLRSSNIKATLMAKFKESFGVGF 177
>MYO1A_BOVIN (P10568) Myosin Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I| heavy chain) (MIHC) (Brush border 110-kDa protein) Length = 1043 Score = 28.5 bits (62), Expect = 4.5 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +1 Query: 73 RRRSMAELKSRRVVLKD-YVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 R S A K+R +L+ + EG P +A ++ P A + L+KNLY Y+R Sbjct: 529 RDLSQAMWKARHPLLRSLFPEGDPKQASLKRPPTAGAQFKSSVTTLMKNLYSKNPNYIR 587
>YESE_BACSU (O31511) Hypothetical protein yesE| Length = 147 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/58 (24%), Positives = 27/58 (46%) Frame = +1 Query: 106 RVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSY 279 + + DY++ YP + H+ A V + D + ++ CD ++ + P QSY Sbjct: 54 KAAIYDYIKDYPKQIHLSSFTAPTVYRSADSNTVIAE--FQCDGHV-IETGLPYRQSY 108
>YHBG_THIFE (P24693) Probable ABC transporter ATP-binding protein in ntrA/rpoN| 5'region (ORF1) Length = 241 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/56 (28%), Positives = 24/56 (42%) Frame = +1 Query: 58 PVHPRRRRSMAELKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYL 225 P+H R R + L V + A +E LP +PV+ E L+ L+L Sbjct: 72 PMHERARMGLGYLPQEPSVFRQMSAADNVLAVLETLPLSPVERQERQEQLLSELHL 127
>TRA2_PSEFL (Q51761) Putative transposase for insertion sequence IS1162| Length = 558 Score = 27.7 bits (60), Expect = 7.6 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Frame = -3 Query: 186 LVDGRRREQLHVRLRGVALHVVLEDHPPALELRHR--SPPPWVDWTAR 49 ++ G RR H+RL+ + +H PA HR +P +DW R Sbjct: 374 VLHGNRRVASHLRLQRRGAYSTQSEHMPASHKAHREWTPQRLLDWGER 421
>ACDB2_METTE (Q9V2Z4) Acetyl-CoA decarbonylase/synthase complex beta subunit 2| (EC 2.3.1.-) (ACDS complex beta subunit 2) (ACDS complex acyltransferase 2) Length = 472 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 133 GYPTEAHMELLPAAPVDEAEDGSVLV 210 G P +EL+ A P+DE EDG V + Sbjct: 27 GGPKSLGLELVRAKPMDEIEDGKVTI 52
>MYO1A_HUMAN (Q9UBC5) Myosin Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I| heavy chain) (MIHC) Length = 1043 Score = 27.3 bits (59), Expect = 10.0 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +1 Query: 124 YVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 + EG P +A ++ P A ++L+KNLY Y+R Sbjct: 547 FPEGNPKQASLKRPPTAGAQFKSSVAILMKNLYSKSPNYIR 587
>TOP2A_CRIGR (P41515) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase| II, alpha isozyme) Length = 1526 Score = 27.3 bits (59), Expect = 10.0 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Frame = +1 Query: 79 RSMAELKSRRVVLKDYVEGYPTEAHMEL----LPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 ++ AE K R+ + + VEG PTE +EL + E G++ K L+ P + Sbjct: 1223 KAEAEKKIRKKIKSENVEGTPTENGLELGSLKQRIEKKQKKEPGAMTKKQTTLAFKPIKK 1282 Query: 247 PKMSRPLHQS 276 K P S Sbjct: 1283 GKKRNPWSDS 1292
>CASC5_MOUSE (Q66JQ7) Protein CASC5 (Cancer susceptibility candidate gene 5| protein homolog) Length = 1612 Score = 27.3 bits (59), Expect = 10.0 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +1 Query: 52 RSPVHPRRRRSMAELKSRRVVLKDYVEGYPTEAHME 159 + P PR+R+S SRRV D ++ + TE+HM+ Sbjct: 45 QEPNPPRKRKS-----SRRVSFADTIKVFQTESHMK 75 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.131 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,056,476 Number of Sequences: 219361 Number of extensions: 515739 Number of successful extensions: 2552 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 2478 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2547 length of database: 80,573,946 effective HSP length: 79 effective length of database: 63,244,427 effective search space used: 1517866248 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
