ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet58g05 |
|---|---|
| Clone Library Name | barley_pub |
>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (AtOPR1) (FS-AT-I) Length = 372 Score = 79.3 bits (194), Expect = 2e-15 Identities = 38/63 (60%), Positives = 43/63 (68%) Frame = +3 Query: 84 MEPEAESKPIPLMTPTRWAYXXXXXXVVLAPLTRQRSYGNVPQPHAAVYYGQRATAGGML 263 ME + +PL+TP + VVLAPLTRQRSYGNVPQPHAA+YY QR T GG L Sbjct: 1 MENGEAKQSVPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFL 60 Query: 264 ITE 272 ITE Sbjct: 61 ITE 63
>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase 2) (AtOPR2) Length = 374 Score = 69.3 bits (168), Expect = 2e-12 Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%) Frame = +3 Query: 96 AESKP-IPLMTPTRWAYXXXXXXVVLAPLTRQRSYGNVPQPHAAVYYGQRATAGGMLITE 272 AE+K +PL+TP + VVLAPLTRQ+SYG+VPQPHA +YY QR + GG LI E Sbjct: 6 AEAKQSVPLLTPYKMGRFNLSHRVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAE 65
>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (LeOPR1) Length = 376 Score = 68.2 bits (165), Expect = 5e-12 Identities = 33/60 (55%), Positives = 41/60 (68%) Frame = +3 Query: 93 EAESKPIPLMTPTRWAYXXXXXXVVLAPLTRQRSYGNVPQPHAAVYYGQRATAGGMLITE 272 E + IPLM+P + VVLAPLTRQRSYG +PQPHA ++Y QR+T GG+LI E Sbjct: 8 EKQVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGE 67
>OPRL2_ARATH (Q9C5W1) Putative 12-oxophytodienoate reductase-like protein 2 (EC| 1.3.1.-) Length = 269 Score = 66.2 bits (160), Expect = 2e-11 Identities = 31/54 (57%), Positives = 38/54 (70%) Frame = +3 Query: 111 IPLMTPTRWAYXXXXXXVVLAPLTRQRSYGNVPQPHAAVYYGQRATAGGMLITE 272 IPL+ P + VVLAPLTR RSYGN+PQP+A +YY QR T GG+LI+E Sbjct: 7 IPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISE 60
>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC| 1.3.1.-) Length = 324 Score = 59.7 bits (143), Expect = 2e-09 Identities = 24/37 (64%), Positives = 31/37 (83%) Frame = +3 Query: 162 VVLAPLTRQRSYGNVPQPHAAVYYGQRATAGGMLITE 272 +V+AP+ R RSYGN+PQPH A+YY QR T GG+LI+E Sbjct: 10 IVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISE 46
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 54.7 bits (130), Expect = 6e-08 Identities = 29/63 (46%), Positives = 35/63 (55%) Frame = +3 Query: 84 MEPEAESKPIPLMTPTRWAYXXXXXXVVLAPLTRQRSYGNVPQPHAAVYYGQRATAGGML 263 M A+ PL +P + VVLAP+TR R+ N+PQ YY QRATAGG L Sbjct: 1 MASSAQDGNNPLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFL 60 Query: 264 ITE 272 ITE Sbjct: 61 ITE 63
>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)| (LeOPR2) Length = 355 Score = 52.0 bits (123), Expect = 4e-07 Identities = 27/63 (42%), Positives = 34/63 (53%) Frame = +3 Query: 84 MEPEAESKPIPLMTPTRWAYXXXXXXVVLAPLTRQRSYGNVPQPHAAVYYGQRATAGGML 263 ME + S +PL TP + +V LTR RS N PQ H YY QRAT GG++ Sbjct: 1 MEANSNSA-VPLCTPYKLGRFKLTHRIVFPALTRNRSQNNTPQSHLTEYYSQRATNGGLI 59 Query: 264 ITE 272 I+E Sbjct: 60 ISE 62
>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (Delayed dehiscence 1) (AtOPR3) Length = 391 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/37 (56%), Positives = 24/37 (64%) Frame = +3 Query: 162 VVLAPLTRQRSYGNVPQPHAAVYYGQRATAGGMLITE 272 VVLAP+TR R+ VP A YY QR T GG LI+E Sbjct: 27 VVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISE 63
>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide| reducing enzyme) Length = 365 Score = 37.7 bits (86), Expect = 0.008 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 2/54 (3%) Frame = +3 Query: 117 LMTPTRWAYXXXXXXVVLAPLTRQRSY--GNVPQPHAAVYYGQRATAGGMLITE 272 L +P + + +APLTR RS G++P P A YY QRA+A G++I+E Sbjct: 6 LYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRASA-GLIISE 58
>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)| Length = 399 Score = 37.4 bits (85), Expect = 0.010 Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Frame = +3 Query: 117 LMTPTRWAYXXXXXXVVLAPLTRQRSY--GNVPQPH-AAVYYGQRA-TAGGMLITE 272 L P + V+ PLTR R+ GN+P AAVYYGQRA G M+ITE Sbjct: 16 LFEPIKIGNTQLAHRAVMPPLTRMRATHPGNIPNKEWAAVYYGQRAQRPGTMIITE 71
>HEM6_AZOSE (Q5P7I0) Coproporphyrinogen 3 oxidase, aerobic (EC 1.3.3.3)| (Coproporphyrinogen III oxidase, aerobic) (Coproporphyrinogenase) (Coprogen oxidase) Length = 311 Score = 32.0 bits (71), Expect = 0.42 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 8/68 (11%) Frame = -2 Query: 263 EHPAGGGALPVV--------HGGVRLRHVAVGALPRQRRQHHPGARSRISPSCRRHERDG 108 + PAGGG + V GGV HV GA+P H P R + Sbjct: 38 QRPAGGGGITRVIEEGRFFERGGVNFSHVIGGAMPASATAHRPDLAGRTF--------EA 89 Query: 107 LGLGLRLH 84 +G+ L LH Sbjct: 90 MGVSLVLH 97
>PRM2_PANPA (P35299) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 31.2 bits (69), Expect = 0.72 Identities = 18/50 (36%), Positives = 19/50 (38%) Frame = -2 Query: 227 HGGVRLRHVAVGALPRQRRQHHPGARSRISPSCRRHERDGLGLGLRLHCC 78 H R RH + L R RQ H R R SCR R G R C Sbjct: 50 HSHYRRRHCSRRRLRRIHRQQHRSCRRRKRRSCRHRRRHRRGCRTRRRTC 99
>PRM2_GORGO (P35313) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 31.2 bits (69), Expect = 0.72 Identities = 18/50 (36%), Positives = 19/50 (38%) Frame = -2 Query: 227 HGGVRLRHVAVGALPRQRRQHHPGARSRISPSCRRHERDGLGLGLRLHCC 78 H R RH + L R RQ H R R SCR R G R C Sbjct: 50 HSHYRRRHCSRRRLRRIHRQQHRSCRRRKRRSCRHRRRHRKGCRTRRRTC 99
>PRM2_PANTR (P35300) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 30.0 bits (66), Expect = 1.6 Identities = 17/50 (34%), Positives = 19/50 (38%) Frame = -2 Query: 227 HGGVRLRHVAVGALPRQRRQHHPGARSRISPSCRRHERDGLGLGLRLHCC 78 H R RH + L R RQ H R R SCR + G R C Sbjct: 50 HSHYRRRHCSRRRLRRIHRQQHRSCRRRKRRSCRHRRKHRRGCRTRRRTC 99
>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1265 Score = 29.6 bits (65), Expect = 2.1 Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 5/68 (7%) Frame = -2 Query: 257 PAGGGALPVVHGG--VRLRHVAVGALPRQ---RRQHHPGARSRISPSCRRHERDGLGLGL 93 PAGGG P GG VR R V +G R+ R + P A + +P R RDG G Sbjct: 149 PAGGGGGPAAAGGAEVRPRSVELGLDERRGRGRAEPEPEAEAG-APGGDRGARDGDGPAG 207 Query: 92 RLHCCELL 69 CC L Sbjct: 208 PGACCRAL 215
>PRM2_PONPY (P35301) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 28.9 bits (63), Expect = 3.6 Identities = 16/50 (32%), Positives = 19/50 (38%) Frame = -2 Query: 227 HGGVRLRHVAVGALPRQRRQHHPGARSRISPSCRRHERDGLGLGLRLHCC 78 H R RH + L R RQ H + R SCR + G R C Sbjct: 50 HSHYRRRHCSRRRLHRIHRQQHRSCKRRRRHSCRHRRKHRRGCRTRRRTC 99
>PRM2_MACMU (P35297) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/50 (34%), Positives = 19/50 (38%) Frame = -2 Query: 227 HGGVRLRHVAVGALPRQRRQHHPGARSRISPSCRRHERDGLGLGLRLHCC 78 H R RH + L R R+ H R R SCR R G R C Sbjct: 50 HSHYRRRHCSRRRLHRIHRRRHRSCRRRRRRSCRHRRRHRRGCRTRRRRC 99
>NUDH_RALSO (Q8XVL3) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 238 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -1 Query: 81 LRAPELPSFDQWRWS 37 LRA E P FD WRWS Sbjct: 113 LRATEHPEFDAWRWS 127
>METH_SYNY3 (Q55786) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1195 Score = 28.9 bits (63), Expect = 3.6 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -2 Query: 212 LRHVAVGALPRQRRQHH-PGARSRISPSCRRHERDGLGLGLRLHCCELLSCRALIN 48 L +A P+QR+ H+ P A S S E L +G RL+ CR L+N Sbjct: 305 LADIAKDLQPKQRQPHYEPSAASIYSTQTYAQENSFLIIGERLNASGSKKCRDLLN 360
>NUDH_RALEJ (Q46X20) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 231 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -1 Query: 81 LRAPELPSFDQWRWS 37 LRA E P FD WRWS Sbjct: 113 LRATEHPEFDAWRWS 127
>PRM2_HYLLA (P35314) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 28.1 bits (61), Expect = 6.1 Identities = 17/50 (34%), Positives = 19/50 (38%) Frame = -2 Query: 227 HGGVRLRHVAVGALPRQRRQHHPGARSRISPSCRRHERDGLGLGLRLHCC 78 H R RH + L R RQ H R SCR+ R G R C Sbjct: 50 HSHYRRRHCSRRRLHRIHRQQHRSCGRRRRRSCRQRRRHRRGCRTRRRRC 99
>SYT_HALSA (Q9HP27) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 640 Score = 28.1 bits (61), Expect = 6.1 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 212 LRHVAVGALPRQRRQHHPGARSRISP 135 LRH A L + R+HHP A+ I P Sbjct: 73 LRHTAAHVLAQAIRRHHPDAKLTIGP 98
>PRM2_HUMAN (P04554) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:| Basic nuclear protein HPI1; Basic nuclear protein HPI2; Basic nuclear protein HPS1; Basic nuclear protein HPS2; Sperm histone HP4 (Sperm protamine P4); Sperm histone HP2 (Sperm Length = 102 Score = 27.7 bits (60), Expect = 8.0 Identities = 16/46 (34%), Positives = 18/46 (39%) Frame = -2 Query: 215 RLRHVAVGALPRQRRQHHPGARSRISPSCRRHERDGLGLGLRLHCC 78 R RH + L R R+ H R R SCR R G R C Sbjct: 54 RRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTC 99
>NUDH_BORPE (Q7VTZ7) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 190 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -1 Query: 81 LRAPELPSFDQWRWS 37 LRA + P FD WRWS Sbjct: 113 LRATQHPEFDAWRWS 127
>NUDH_BORPA (Q7W482) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 190 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -1 Query: 81 LRAPELPSFDQWRWS 37 LRA + P FD WRWS Sbjct: 113 LRATQHPEFDAWRWS 127
>NUDH_BORBR (Q7WFP0) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 190 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -1 Query: 81 LRAPELPSFDQWRWS 37 LRA + P FD WRWS Sbjct: 113 LRATQHPEFDAWRWS 127
>HEM6_METCA (Q603L4) Coproporphyrinogen 3 oxidase, aerobic (EC 1.3.3.3)| (Coproporphyrinogen III oxidase, aerobic) (Coproporphyrinogenase) (Coprogen oxidase) Length = 304 Score = 27.7 bits (60), Expect = 8.0 Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 8/48 (16%) Frame = -2 Query: 263 EHPAGGGALPVV--------HGGVRLRHVAVGALPRQRRQHHPGARSR 144 EH AGGG V GGV HV +LP H P R Sbjct: 39 EHAAGGGGRTRVLSGGETFEQGGVNFSHVRGASLPASATAHRPELAGR 86 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,746,863 Number of Sequences: 219361 Number of extensions: 659142 Number of successful extensions: 2179 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2177 length of database: 80,573,946 effective HSP length: 66 effective length of database: 66,096,120 effective search space used: 1586306880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
