ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet58g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene 272 3e-70
2gb|U18127.1|HVU18127 Hordeum vulgare phospholipid transfer prote... 208 3e-51
3emb|X68656.1|HVCW19 H.vulgare Cw-19 mRNA 198 3e-48
4emb|AJ852556.1| Triticum aestivum ltp9.2d gene for type 1 non sp... 129 3e-27
5emb|AJ852555.1| Triticum aestivum ltp9.2c gene for type 1 non sp... 121 6e-25
6emb|AJ784901.1| Triticum aestivum mRNA for type 1 non-specific l... 109 2e-21
7emb|Z66529.1|HVGLTP4X9 H.vulgare Ltp4.2 gene 103 1e-19
8emb|Z37115.1|HVLTPPB H.vulgare (clone pKG285) mRNA for lipid tra... 103 1e-19
9gb|U63993.1|HVU63993 Hordeum vulgare lipid transfer protein (blt... 103 1e-19
10emb|X68654.1|HVCW21 H.vulgare Cw-21 mRNA 88 9e-15
11gb|AF334185.1|AF334185 Triticum aestivum lipid transfer protein ... 72 5e-10
12emb|AJ852557.1| Triticum aestivum ltp9.5b gene for type 1 non sp... 72 5e-10
13gb|AY789644.1| Triticum aestivum lipid transfer protein 4 (LTP4)... 62 5e-07
14gb|AY754742.1| Triticum aestivum lipid transfer protein (LTP2) m... 62 5e-07
15gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) g... 58 8e-06
16gb|AF302788.1|AF302788 Triticum aestivum lipid transfer protein ... 58 8e-06
17gb|AY796184.1| Triticum aestivum lipid transfer protein (LTP1) m... 56 3e-05
18gb|DQ465677.1| Triticum aestivum clone Lt10B6 non-specific lipid... 56 3e-05
19gb|DQ465676.1| Triticum aestivum clone Lt10F9 non-specific lipid... 50 0.002
20gb|DQ465678.1| Triticum aestivum clone Lt10E10 non-specific lipi... 50 0.002
21gb|AC007023.3|AC007023 Homo sapiens clone DJ0635B05, complete se... 46 0.030
22gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 1.8
23ref|XM_638808.1| Dictyostelium discoideum hypothetical protein (... 40 1.8
24ref|XM_628905.1| Dictyostelium discoideum hypothetical protein (... 40 1.8
25gb|AC183388.3| Pan troglodytes BAC clone CH251-53D20 from chromo... 40 1.8
26gb|AC002288.1|HUAC002288 Homo sapiens Chromosome 16 BAC clone CI... 40 1.8
27gb|AC130451.2| Homo sapiens chromosome 16 clone CTA-249B10, comp... 40 1.8
28emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA 40 1.8
29emb|X56547.1|HSBLT4 H. vulgare BLT4 mRNA 40 1.8
30gb|AC127089.4| Homo sapiens BAC clone RP13-590E7 from 4, complet... 40 1.8
31gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041... 40 1.8
32gb|AC158526.3| Mus musculus BAC clone RP23-288A9 from chromosome... 40 1.8
33gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 38 7.2
34emb|Z68011.1|CET21B6 Caenorhabditis elegans Cosmid T21B6, comple... 38 7.2
35emb|AL592308.3| Human DNA sequence from clone RP13-610P22 on chr... 38 7.2
36emb|AL035495.13|HS319F24 Human DNA sequence from clone RP1-319F2... 38 7.2
37gb|AF374373.1|AF374373 Oikopleura dioica clone ODG-DC32, complet... 38 7.2
38dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.2
39gb|AC107067.3| Homo sapiens BAC clone RP11-10L7 from 4, complete... 38 7.2
40dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.2
41dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.2
42dbj|AK062099.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.2
43emb|AL691448.24| Mouse DNA sequence from clone RP23-103A1 on chr... 38 7.2 
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene
          Length = 1862

 Score =  272 bits (137), Expect = 3e-70
 Identities = 137/137 (100%)
 Strand = Plus / Plus

                                                                        
Query: 6    atacactcacttagcaaatctagctatctcatcatctccggcttagctcaccaccactac 65
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949  atacactcacttagcaaatctagctatctcatcatctccggcttagctcaccaccactac 1008

                                                                        
Query: 66   tattgctagcttgtgatcgaaatggctcgcgctgcagctactcagctcgtgctggtcgcc 125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 tattgctagcttgtgatcgaaatggctcgcgctgcagctactcagctcgtgctggtcgcc 1068

                             
Query: 126  atggtggccgctatgct 142
            |||||||||||||||||
Sbjct: 1069 atggtggccgctatgct 1085
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>gb|U18127.1|HVU18127 Hordeum vulgare phospholipid transfer protein precursor gene,
           complete cds
          Length = 573

 Score =  208 bits (105), Expect = 3e-51
 Identities = 129/136 (94%), Gaps = 2/136 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   tacactcacttagcaaatctagctatctcatcatctccggcttagctcaccaccactact 66
           |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 8   tacaatcacttagcaaatctagctatctcatcatctgcggcttagctcaccaccactact 67

                                                                       
Query: 67  attgctagcttgtgatcgaaatggctcgcgctgcagctactcagctcgtgctggtcgcca 126
           ||||||||||  ||||||||||||| ||  ||||||||||||||||||||||||||||||
Sbjct: 68  attgctagct--tgatcgaaatggcccgttctgcagctactcagctcgtgctggtcgcca 125

                           
Query: 127 tggtggccgctatgct 142
           ||||||||||||||||
Sbjct: 126 tggtggccgctatgct 141
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>emb|X68656.1|HVCW19 H.vulgare Cw-19 mRNA
          Length = 660

 Score =  198 bits (100), Expect = 3e-48
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 43  ccggcttagctcaccaccactactattgctagcttgtgatcgaaatggctcgcgctgcag 102
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   ccggcttagctcaccaccactactattgctagcttgtgatcgaaatggctcgcgctgcag 61

                                                   
Query: 103 ctactcagctcgtgctggtcgccatggtggccgctatgct 142
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  ctactcagctcgtgctggtcgccatggtggccgctatgct 101
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>emb|AJ852556.1| Triticum aestivum ltp9.2d gene for type 1 non specific lipid transfer
            protein precursor
          Length = 2087

 Score =  129 bits (65), Expect = 3e-27
 Identities = 119/136 (87%), Gaps = 2/136 (1%)
 Strand = Plus / Plus

                                                                        
Query: 7    tacactcacttagcaaatctagctatctcatcatctccggcttagctcaccaccactact 66
            |||| |||||||||||||||||||||||||||||||| | || ||||||| |||||||||
Sbjct: 1180 tacaatcacttagcaaatctagctatctcatcatctctgcctgagctcactaccactact 1239

                                                                        
Query: 67   attgctagcttgtgatcgaaatggctcgcgctgcagctactcagctcgtgctggtcgcca 126
            ||||||||||  ||||||| ||||| ||  |||| | | ||||| ||||||| |||||| 
Sbjct: 1240 attgctagct--tgatcgagatggcccgttctgctgttgctcaggtcgtgctcgtcgccg 1297

                            
Query: 127  tggtggccgctatgct 142
            ||||||||||||||||
Sbjct: 1298 tggtggccgctatgct 1313
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>emb|AJ852555.1| Triticum aestivum ltp9.2c gene for type 1 non specific lipid transfer
            protein precursor
          Length = 2122

 Score =  121 bits (61), Expect = 6e-25
 Identities = 118/136 (86%), Gaps = 2/136 (1%)
 Strand = Plus / Plus

                                                                        
Query: 7    tacactcacttagcaaatctagctatctcatcatctccggcttagctcaccaccactact 66
            |||| |||||||||||||||||||||| ||||||||| | || ||||||| |||||||||
Sbjct: 1192 tacaatcacttagcaaatctagctatcccatcatctctgcctgagctcactaccactact 1251

                                                                        
Query: 67   attgctagcttgtgatcgaaatggctcgcgctgcagctactcagctcgtgctggtcgcca 126
            ||||||||||  ||||||| ||||| ||  |||| | | ||||| ||||||| |||||| 
Sbjct: 1252 attgctagct--tgatcgagatggcccgttctgctgttgctcaggtcgtgctcgtcgccg 1309

                            
Query: 127  tggtggccgctatgct 142
            ||||||||||||||||
Sbjct: 1310 tggtggccgctatgct 1325
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>emb|AJ784901.1| Triticum aestivum mRNA for type 1 non-specific lipid transfer
           protein precursor (ltp9.2 gene)
          Length = 708

 Score =  109 bits (55), Expect = 2e-21
 Identities = 106/122 (86%), Gaps = 2/122 (1%)
 Strand = Plus / Plus

                                                                       
Query: 21  aaatctagctatctcatcatctccggcttagctcaccaccactactattgctagcttgtg 80
           ||||||||||||||||||||||| | || ||||||| |||||||||||||||||||  ||
Sbjct: 3   aaatctagctatctcatcatctctgcctgagctcactaccactactattgctagct--tg 60

                                                                       
Query: 81  atcgaaatggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgctatg 140
           ||||| ||||| ||  |||| | | ||||| ||||||| |||||| ||||||||||||||
Sbjct: 61  atcgagatggcccgttctgctgttgctcaggtcgtgctcgtcgccgtggtggccgctatg 120

             
Query: 141 ct 142
           ||
Sbjct: 121 ct 122
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>emb|Z66529.1|HVGLTP4X9 H.vulgare Ltp4.2 gene
          Length = 1567

 Score =  103 bits (52), Expect = 1e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                   
Query: 87  atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgctatgct 142
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 665 atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgccatgct 720
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>emb|Z37115.1|HVLTPPB H.vulgare (clone pKG285) mRNA for lipid transfer protein precursor
          Length = 691

 Score =  103 bits (52), Expect = 1e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                       
Query: 79  tgatcgaaatggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgcta 138
           ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7   tgatcgaaatggcccgttctgcagctactcagctcgtgctggtcgccatggtggccgcta 66

               
Query: 139 tgct 142
           ||||
Sbjct: 67  tgct 70
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>gb|U63993.1|HVU63993 Hordeum vulgare lipid transfer protein (blt4.9) gene, complete cds
          Length = 3238

 Score =  103 bits (52), Expect = 1e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                    
Query: 87   atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgctatgct 142
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2061 atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgccatgct 2116
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>emb|X68654.1|HVCW21 H.vulgare Cw-21 mRNA
          Length = 705

 Score = 87.7 bits (44), Expect = 9e-15
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 87  atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgctatgct 142
           ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 60  atggctcgcgctgcagctagtcagctcgtgctggtcgccctggtggccgccatgct 115
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>gb|AF334185.1|AF334185 Triticum aestivum lipid transfer protein precursor (LTP2) mRNA,
           complete cds
          Length = 730

 Score = 71.9 bits (36), Expect = 5e-10
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                               
Query: 82  tcgaaatggctcgcgctgcagctactcagctcgtgctggtcgccatggtggc 133
           |||| ||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 75  tcgagatggctcgcactgcagctactaagctcgtgctggtcgccctggtggc 126
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>emb|AJ852557.1| Triticum aestivum ltp9.5b gene for type 1 non specific lipid
           transfer protein precursor
          Length = 496

 Score = 71.9 bits (36), Expect = 5e-10
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                               
Query: 82  tcgaaatggctcgcgctgcagctactcagctcgtgctggtcgccatggtggc 133
           |||| ||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 16  tcgagatggctcgcactgcagctactaagctcgtgctggtcgccctggtggc 67
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>gb|AY789644.1| Triticum aestivum lipid transfer protein 4 (LTP4) mRNA, complete
           cds
          Length = 345

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 87  atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggc 133
           ||||||||| || |||||||| ||||||||||||||||| |||||||
Sbjct: 1   atggctcgcactacagctactaagctcgtgctggtcgccctggtggc 47
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>gb|AY754742.1| Triticum aestivum lipid transfer protein (LTP2) mRNA, complete cds
          Length = 348

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 87  atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggc 133
           ||||||||| ||||||||||| | ||||||||||||||| |||||||
Sbjct: 1   atggctcgcactgcagctactaaactcgtgctggtcgccctggtggc 47
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>gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) gene, complete cds
          Length = 3448

 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 82   tcgaaatggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgctatgc 141
            |||| ||||||||| ||||||| ||  ||||||||||||||||| ||||||| || ||||
Sbjct: 2852 tcgagatggctcgcactgcagcaacaaagctcgtgctggtcgccctggtggcggcaatgc 2911

             
Query: 142  t 142
            |
Sbjct: 2912 t 2912
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>gb|AF302788.1|AF302788 Triticum aestivum lipid transfer protein precursor (LTP1) mRNA,
           complete cds
          Length = 737

 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 82  tcgaaatggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgctatgc 141
           |||| ||||||||| ||||||| ||  ||||||||||||||||| ||||||| || ||||
Sbjct: 56  tcgagatggctcgcactgcagcaacaaagctcgtgctggtcgccctggtggcggcaatgc 115

            
Query: 142 t 142
           |
Sbjct: 116 t 116
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>gb|AY796184.1| Triticum aestivum lipid transfer protein (LTP1) mRNA, complete cds
          Length = 348

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 87  atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgctatgct 142
           ||||||||| ||||||| ||  ||||||||||||||||| ||||||| || |||||
Sbjct: 1   atggctcgcactgcagcaacaaagctcgtgctggtcgccctggtggcggcaatgct 56
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>gb|DQ465677.1| Triticum aestivum clone Lt10B6 non-specific lipid transfer protein
           1 precursor, mRNA, complete cds
          Length = 348

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 87  atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgctatgct 142
           ||||||||| ||||||| ||  ||||||||||||||||| ||||||| || |||||
Sbjct: 1   atggctcgcactgcagcaacaaagctcgtgctggtcgccctggtggcggcaatgct 56
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>gb|DQ465676.1| Triticum aestivum clone Lt10F9 non-specific lipid transfer protein
           1 precursor, mRNA, complete cds
          Length = 348

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 106 ctcagctcgtgctggtcgccatggtggccgctatgct 142
           ||||| ||||||| |||||| ||||||||||||||||
Sbjct: 20  ctcaggtcgtgctcgtcgccgtggtggccgctatgct 56
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>gb|DQ465678.1| Triticum aestivum clone Lt10E10 non-specific lipid transfer protein
           1 precursor, mRNA, complete cds
          Length = 348

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 106 ctcagctcgtgctggtcgccatggtggccgctatgct 142
           ||||| ||||||| |||||| ||||||||||||||||
Sbjct: 20  ctcaggtcgtgctcgtcgccgtggtggccgctatgct 56
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>gb|AC007023.3|AC007023 Homo sapiens clone DJ0635B05, complete sequence
          Length = 148454

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 54    caccaccactactattgctagct 76
             |||||||||||||||||||||||
Sbjct: 23996 caccaccactactattgctagct 24018
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    gctggtcgccatggtggccg 135
              ||||||||||||||||||||
Sbjct: 608575 gctggtcgccatggtggccg 608556
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>ref|XM_638808.1| Dictyostelium discoideum hypothetical protein (DDB0167912), partial
           mRNA
          Length = 1989

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  caccaccactactattgcta 73
           ||||||||||||||||||||
Sbjct: 136 caccaccactactattgcta 117
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>ref|XM_628905.1| Dictyostelium discoideum hypothetical protein (DDB0219917), partial
            mRNA
          Length = 2928

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 54   caccaccactactattgcta 73
            ||||||||||||||||||||
Sbjct: 1024 caccaccactactattgcta 1005
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>gb|AC183388.3| Pan troglodytes BAC clone CH251-53D20 from chromosome 16, complete
              sequence
          Length = 161327

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     ccaccactactattgctagc 75
              ||||||||||||||||||||
Sbjct: 153439 ccaccactactattgctagc 153458
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>gb|AC002288.1|HUAC002288 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-249B10, complete sequence
          Length = 213633

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     ccaccactactattgctagc 75
              ||||||||||||||||||||
Sbjct: 182505 ccaccactactattgctagc 182524
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>gb|AC130451.2| Homo sapiens chromosome 16 clone CTA-249B10, complete sequence
          Length = 215866

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ccaccactactattgctagc 75
             ||||||||||||||||||||
Sbjct: 30186 ccaccactactattgctagc 30167
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>emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA
          Length = 732

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 18 agcaaatctagctatctcat 37
          ||||||||||||||||||||
Sbjct: 1  agcaaatctagctatctcat 20
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>emb|X56547.1|HSBLT4 H. vulgare BLT4 mRNA
          Length = 724

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 18 agcaaatctagctatctcat 37
          ||||||||||||||||||||
Sbjct: 2  agcaaatctagctatctcat 21
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>gb|AC127089.4| Homo sapiens BAC clone RP13-590E7 from 4, complete sequence
          Length = 25804

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ccaccactactattgctagc 75
             ||||||||||||||||||||
Sbjct: 15898 ccaccactactattgctagc 15879
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>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4,
              complete sequence
          Length = 333321

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     caccaccactactattgcta 73
              ||||||||||||||||||||
Sbjct: 267644 caccaccactactattgcta 267625
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>gb|AC158526.3| Mus musculus BAC clone RP23-288A9 from chromosome 12, complete sequence
          Length = 236362

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     caccaccactactattgcta 73
              ||||||||||||||||||||
Sbjct: 163824 caccaccactactattgcta 163843
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 88      tggctcgcgctgcagctac 106
               |||||||||||||||||||
Sbjct: 2023360 tggctcgcgctgcagctac 2023342
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>emb|Z68011.1|CET21B6 Caenorhabditis elegans Cosmid T21B6, complete sequence
          Length = 30716

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 7    tacactcacttagcaaatc 25
            |||||||||||||||||||
Sbjct: 9280 tacactcacttagcaaatc 9262
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>emb|AL592308.3| Human DNA sequence from clone RP13-610P22 on chromosome 1, complete
             sequence
          Length = 170581

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    aatctagctatctcatcat 40
             |||||||||||||||||||
Sbjct: 94073 aatctagctatctcatcat 94055
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>emb|AL035495.13|HS319F24 Human DNA sequence from clone RP1-319F24 on chromosome 22q12.3-13.31,
             complete sequence
          Length = 28515

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    tctagctatctcatcatct 42
             |||||||||||||||||||
Sbjct: 14400 tctagctatctcatcatct 14418
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>gb|AF374373.1|AF374373 Oikopleura dioica clone ODG-DC32, complete sequence
          Length = 13557

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 99   gcagctactcagctcgtgctggt 121
            |||||||||||||| ||||||||
Sbjct: 8672 gcagctactcagctggtgctggt 8694
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 17       tagcaaatctagctatctc 35
                |||||||||||||||||||
Sbjct: 35274777 tagcaaatctagctatctc 35274759
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>gb|AC107067.3| Homo sapiens BAC clone RP11-10L7 from 4, complete sequence
          Length = 112291

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    caccaccactactattgct 72
             |||||||||||||||||||
Sbjct: 53018 caccaccactactattgct 53036
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>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1119_A01
          Length = 108727

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    tagcaaatctagctatctc 35
             |||||||||||||||||||
Sbjct: 25111 tagcaaatctagctatctc 25093
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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0474F11
          Length = 139544

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    tagcaaatctagctatctc 35
             |||||||||||||||||||
Sbjct: 86827 tagcaaatctagctatctc 86809
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>dbj|AK062099.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A03, full
           insert sequence
          Length = 669

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 17  tagcaaatctagctatctc 35
           |||||||||||||||||||
Sbjct: 554 tagcaaatctagctatctc 572
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>emb|AL691448.24| Mouse DNA sequence from clone RP23-103A1 on chromosome 11, complete
              sequence
          Length = 197959

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 20     caaatctagctatctcatc 38
              |||||||||||||||||||
Sbjct: 188350 caaatctagctatctcatc 188332


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,190,422
Number of Sequences: 3902068
Number of extensions: 1190422
Number of successful extensions: 66640
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66521
Number of HSP's gapped (non-prelim): 115
length of query: 150
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 129
effective length of database: 17,151,101,840
effective search space: 2212492137360
effective search space used: 2212492137360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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