ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet58f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479160.1| Oryza sativa (japonica cultivar-group), mRNA 202 5e-49
2dbj|AK119233.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 5e-49
3dbj|AK103536.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 5e-49
4dbj|AK059856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 9e-23
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 105 9e-20
6dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 105 9e-20
7dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic D... 105 9e-20
8gb|AY104066.1| Zea mays PCO123558 mRNA sequence 90 5e-15
9gb|BT016821.1| Zea mays clone Contig654 mRNA sequence 80 5e-12
10emb|AM260507.1| Platanus acerifolia partial mRNA for oligouridyl... 78 2e-11
11dbj|AK120437.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
12dbj|AK107324.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
13dbj|AK099639.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
14dbj|AK060913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
15gb|BT013167.1| Lycopersicon esculentum clone 134230R, mRNA sequence 66 7e-08
16ref|NM_104285.2| Arabidopsis thaliana mRNA 3'-UTR binding AT1G54... 62 1e-06
17ref|NM_179475.1| Arabidopsis thaliana mRNA 3'-UTR binding AT1G54... 62 1e-06
18gb|AY133610.1| Arabidopsis thaliana At1g54080/F15I1_16 mRNA, com... 62 1e-06
19gb|AF361639.1| Arabidopsis thaliana At1g54080/F15I1_16 mRNA, com... 62 1e-06
20gb|AF348587.1| Arabidopsis thaliana clone C00207 (e) putative ol... 62 1e-06
21emb|BX816622.1|CNS0AD7O Arabidopsis thaliana Full-length cDNA Co... 62 1e-06
22gb|DQ268861.1| Solanum tuberosum clone 180D07 oligouridylate bin... 58 2e-05
23ref|XM_483366.1| Oryza sativa (japonica cultivar-group), mRNA 56 7e-05
24dbj|AK069912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 7e-05
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
26dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
27dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
28emb|AJ272011.1|NPL272011 Nicotiana plumbaginifolia mRNA for olig... 48 0.018
29gb|AY103766.1| Zea mays PCO100830 mRNA sequence 48 0.018
30ref|NM_112266.2| Arabidopsis thaliana mRNA 3'-UTR binding AT3G14... 46 0.070
31gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725... 46 0.070
32gb|AY139775.1| Arabidopsis thaliana AT3g14100/MAG2_5 mRNA, compl... 46 0.070
33emb|BX823141.1|CNS0A605 Arabidopsis thaliana Full-length cDNA Co... 46 0.070
34emb|BX825019.1|CNS0A5JR Arabidopsis thaliana Full-length cDNA Co... 46 0.070
35gb|BT004540.1| Arabidopsis thaliana AT3g14100/MAG2_5 gene, compl... 46 0.070
36gb|AY087692.1| Arabidopsis thaliana clone 37712 mRNA, complete s... 46 0.070
37gb|AF528565.1| Zea mays cultivar BSSS53 chromosome 4 clone BAC 0... 44 0.27
38gb|AC141880.3| Mus musculus BAC clone RP24-220N1 from chromosome... 44 0.27
39emb|Z71292.1|SCYNL016W S.cerevisiae chromosome XIV reading frame... 44 0.27
40gb|L20767.1|YSCPUB1P Saccharomyces cerevisiae poly(A)+ RNA-bindi... 44 0.27
41gb|L13725.1|YSCPUB1X Yeast nuclear and cytoplasmic polyadenylate... 44 0.27
42gb|L01797.1|YSCRNABIND Saccharomyces cerevisiae putative RNA-bin... 44 0.27
43gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, co... 42 1.1
44gb|AC182692.2| Populus trichocarpa clone Pop1-44B2, complete seq... 42 1.1
45gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, co... 42 1.1
46emb|AL713962.14| Mouse DNA sequence from clone RP23-3D5 on chrom... 42 1.1
47ref|NM_133083.1| Drosophila melanogaster CG15040-RA (CG15040), mRNA 42 1.1
48gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, r... 42 1.1
49gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, comple... 42 1.1
50gb|AC006577.2|F15I1 Sequence of BAC F15I1 from Arabidopsis thali... 42 1.1
51gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 ... 42 1.1
52emb|CR392352.6| Zebrafish DNA sequence from clone DKEYP-106C3 in... 42 1.1
53emb|CT030646.6| Mouse DNA sequence from clone RP23-222A16 on chr... 42 1.1
54emb|AL928601.6| Mouse DNA sequence from clone RP23-88B5 on chrom... 42 1.1
55ref|NM_101598.2| Arabidopsis thaliana mRNA 3'-UTR binding AT1G17... 40 4.3
56gb|AC111071.8| Mus musculus chromosome 15, clone RP24-298N6, com... 40 4.3
57gb|AC163443.6| Mus musculus chromosome 15, clone RP23-284G17, co... 40 4.3
58ref|XM_718783.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 4.3
59ref|XM_738659.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 4.3
60gb|AF362517.1| Campoletis sonorensis ichnovirus segment M, compl... 40 4.3
61emb|AL450426.7| Human DNA sequence from clone RP11-317C20 on chr... 40 4.3
62ref|XM_786323.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 4.3
63gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
64gb|AC154602.3| Mus musculus BAC clone RP23-343M11 from chromosom... 40 4.3
65dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 4.3
66gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 fro... 40 4.3
67ref|NM_079542.2| Drosophila melanogaster -Esterase-4 CG1082-RA (... 40 4.3
68gb|AY070981.1| Drosophila melanogaster RE07760 full length cDNA 40 4.3
69gb|AC003046.4| Homo sapiens Xp22 PACs RPC11-263P4 and RPC11-164K... 40 4.3
70dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
71emb|BX815461.1|CNS0ACRK Arabidopsis thaliana Full-length cDNA Co... 40 4.3
72emb|BX814983.1|CNS0ACXV Arabidopsis thaliana Full-length cDNA Co... 40 4.3
73gb|AC011253.4|AC011253 Drosophila melanogaster, chromosome 3R, r... 40 4.3
74gb|AC008312.4|AC008312 Drosophila melanogaster, chromosome 3R, r... 40 4.3
75gb|AC154458.2| Mus musculus BAC clone RP24-162I9 from chromosome... 40 4.3
76gb|AC005859.1| Homo sapiens X BAC GSHB-324M7 (Genome Systems Hum... 40 4.3
77gb|AY085705.1| Arabidopsis thaliana clone 17210 mRNA, complete s... 40 4.3
78gb|AC007843.6|AC007843 Arabidopsis thaliana chromosome I BAC F28... 40 4.3
79gb|AC022492.5|AC022492 Genomic sequence for Arabidopsis thaliana... 40 4.3
80gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete se... 40 4.3
81gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F1... 40 4.3
82gb|AE003671.4| Drosophila melanogaster chromosome 3R, section 13... 40 4.3
83gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
84gb|U51046.1|DMU51046 Drosophila melanogaster alpha esterase (aE4... 40 4.3 
>ref|XM_479160.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1666

 Score =  202 bits (102), Expect = 5e-49
 Identities = 248/296 (83%), Gaps = 3/296 (1%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
           ||||||||||| ||||| |||||||| |||||||| |||||||| |||||||| ||||||
Sbjct: 674 tgctctgatgcccgagttatgtgggatcaaaagactggaagatctagaggttatggcttt 733

                                                                       
Query: 90  gtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttgtgg 149
           ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    |||
Sbjct: 734 gtttccttcaggaatcaacaggatgcacaaagtgccataaatgacctaaatggacaatgg 793

                                                                       
Query: 150 cttggaaatcggcagattcgttgcaactgggcaacaaaaggcgccaacagtggcgaggac 209
           ||||||| ||||||||| || ||||||||||||||||| || |||| || |||||||   
Sbjct: 794 cttggaagtcggcagatacgctgcaactgggcaacaaagggtgccagcaatggcgag--- 850

                                                                       
Query: 210 cagctagcatcagattcgaaaagtatagttgatgtaaataacaatttcacagaaaatgca 269
           ||||   | |||||||| ||||   ||| |||| | | ||||||||| |||||| | |  
Sbjct: 851 cagcagacttcagattcaaaaaacgtagctgatctgactaacaatttgacagaagacggg 910

                                                                   
Query: 270 aagcagaaatcaaacgaagatgctcctgaaaataatccattgtacagaactgttta 325
           ||| ||||| |||| |||||||| || || || ||||||  |||||||||||||||
Sbjct: 911 aaggagaaagcaaatgaagatgccccagagaacaatccacagtacagaactgttta 966
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>dbj|AK119233.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E11, full
           insert sequence
          Length = 1665

 Score =  202 bits (102), Expect = 5e-49
 Identities = 248/296 (83%), Gaps = 3/296 (1%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
           ||||||||||| ||||| |||||||| |||||||| |||||||| |||||||| ||||||
Sbjct: 673 tgctctgatgcccgagttatgtgggatcaaaagactggaagatctagaggttatggcttt 732

                                                                       
Query: 90  gtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttgtgg 149
           ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    |||
Sbjct: 733 gtttccttcaggaatcaacaggatgcacaaagtgccataaatgacctaaatggacaatgg 792

                                                                       
Query: 150 cttggaaatcggcagattcgttgcaactgggcaacaaaaggcgccaacagtggcgaggac 209
           ||||||| ||||||||| || ||||||||||||||||| || |||| || |||||||   
Sbjct: 793 cttggaagtcggcagatacgctgcaactgggcaacaaagggtgccagcaatggcgag--- 849

                                                                       
Query: 210 cagctagcatcagattcgaaaagtatagttgatgtaaataacaatttcacagaaaatgca 269
           ||||   | |||||||| ||||   ||| |||| | | ||||||||| |||||| | |  
Sbjct: 850 cagcagacttcagattcaaaaaacgtagctgatctgactaacaatttgacagaagacggg 909

                                                                   
Query: 270 aagcagaaatcaaacgaagatgctcctgaaaataatccattgtacagaactgttta 325
           ||| ||||| |||| |||||||| || || || ||||||  |||||||||||||||
Sbjct: 910 aaggagaaagcaaatgaagatgccccagagaacaatccacagtacagaactgttta 965
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>dbj|AK103536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132B05, full
           insert sequence
          Length = 1666

 Score =  202 bits (102), Expect = 5e-49
 Identities = 248/296 (83%), Gaps = 3/296 (1%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
           ||||||||||| ||||| |||||||| |||||||| |||||||| |||||||| ||||||
Sbjct: 674 tgctctgatgcccgagttatgtgggatcaaaagactggaagatctagaggttatggcttt 733

                                                                       
Query: 90  gtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttgtgg 149
           ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    |||
Sbjct: 734 gtttccttcaggaatcaacaggatgcacaaagtgccataaatgacctaaatggacaatgg 793

                                                                       
Query: 150 cttggaaatcggcagattcgttgcaactgggcaacaaaaggcgccaacagtggcgaggac 209
           ||||||| ||||||||| || ||||||||||||||||| || |||| || |||||||   
Sbjct: 794 cttggaagtcggcagatacgctgcaactgggcaacaaagggtgccagcaatggcgag--- 850

                                                                       
Query: 210 cagctagcatcagattcgaaaagtatagttgatgtaaataacaatttcacagaaaatgca 269
           ||||   | |||||||| ||||   ||| |||| | | ||||||||| |||||| | |  
Sbjct: 851 cagcagacttcagattcaaaaaacgtagctgatctgactaacaatttgacagaagacggg 910

                                                                   
Query: 270 aagcagaaatcaaacgaagatgctcctgaaaataatccattgtacagaactgttta 325
           ||| ||||| |||| |||||||| || || || ||||||  |||||||||||||||
Sbjct: 911 aaggagaaagcaaatgaagatgccccagagaacaatccacagtacagaactgttta 966
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>dbj|AK059856.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A07, full
           insert sequence
          Length = 1390

 Score =  115 bits (58), Expect = 9e-23
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
           ||||||||||| ||||| |||||||| |||||||| |||||||| |||||||| ||||||
Sbjct: 310 tgctctgatgcccgagttatgtgggatcaaaagactggaagatctagaggttatggcttt 369

                                 
Query: 90  gtttccttcaggaatcaacagg 111
           ||||||||||||||||||||||
Sbjct: 370 gtttccttcaggaatcaacagg 391



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 177/219 (80%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 acaggatgcacagagtgccataaatgacttaaatggtttgtggcttggaaatcggcagat 166
           |||||||||||| ||||||||||||||| |||||||    |||||||||| |||||||||
Sbjct: 474 acaggatgcacaaagtgccataaatgacctaaatggacaatggcttggaagtcggcagat 533

                                                                       
Query: 167 tcgttgcaactgggcaacaaaaggcgccaacagtggcgaggaccagctagcatcagattc 226
            || ||||||||||||||||| || |||| || |||||||   ||||   | ||||||||
Sbjct: 534 acgctgcaactgggcaacaaagggtgccagcaatggcgag---cagcagacttcagattc 590

                                                                       
Query: 227 gaaaagtatagttgatgtaaataacaatttcacagaaaatgcaaagcagaaatcaaacga 286
            ||||   ||| |||| | | ||||||||| |||||| | |  ||| ||||| |||| ||
Sbjct: 591 aaaaaacgtagctgatctgactaacaatttgacagaagacgggaaggagaaagcaaatga 650

                                                  
Query: 287 agatgctcctgaaaataatccattgtacagaactgttta 325
           |||||| || || || ||||||  |||||||||||||||
Sbjct: 651 agatgccccagagaacaatccacagtacagaactgttta 689
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  105 bits (53), Expect = 9e-20
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                            
Query: 35       tgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttc 94
                |||||| ||||| |||||||| |||||||| |||||||| |||||||| |||||||||||
Sbjct: 25307243 tgatgcccgagttatgtgggatcaaaagactggaagatctagaggttatggctttgtttc 25307302

                                 
Query: 95       cttcaggaatcaacagg 111
                |||||||||||||||||
Sbjct: 25307303 cttcaggaatcaacagg 25307319



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 147      tggcttggaaatcggcagattcgttgcaactgggcaacaaaaggcgccaacagtggcgag 206
                |||||||||| ||||||||| || ||||||||||||||||| || |||| || |||||||
Sbjct: 25307556 tggcttggaagtcggcagatacgctgcaactgggcaacaaagggtgccagcaatggcgag 25307615



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                     
Query: 107      acaggatgcacagagtgccataaatgacttaaatggt 143
                |||||||||||| ||||||||||||||| ||||||||
Sbjct: 25307402 acaggatgcacaaagtgccataaatgacctaaatggt 25307438



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 274      agaaatcaaacgaagatgctcctgaaaataatccattgtacagaactgttta 325
                ||||| |||| |||||||| || || || ||||||  |||||||||||||||
Sbjct: 25308200 agaaagcaaatgaagatgccccagagaacaatccacagtacagaactgttta 25308251
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>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0616D06
          Length = 153800

 Score =  105 bits (53), Expect = 9e-20
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                          
Query: 35     tgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttc 94
              |||||| ||||| |||||||| |||||||| |||||||| |||||||| |||||||||||
Sbjct: 123914 tgatgcccgagttatgtgggatcaaaagactggaagatctagaggttatggctttgtttc 123973

                               
Query: 95     cttcaggaatcaacagg 111
              |||||||||||||||||
Sbjct: 123974 cttcaggaatcaacagg 123990



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                          
Query: 147    tggcttggaaatcggcagattcgttgcaactgggcaacaaaaggcgccaacagtggcgag 206
              |||||||||| ||||||||| || ||||||||||||||||| || |||| || |||||||
Sbjct: 124227 tggcttggaagtcggcagatacgctgcaactgggcaacaaagggtgccagcaatggcgag 124286



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                   
Query: 107    acaggatgcacagagtgccataaatgacttaaatggt 143
              |||||||||||| ||||||||||||||| ||||||||
Sbjct: 124073 acaggatgcacaaagtgccataaatgacctaaatggt 124109



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                  
Query: 274    agaaatcaaacgaagatgctcctgaaaataatccattgtacagaactgttta 325
              ||||| |||| |||||||| || || || ||||||  |||||||||||||||
Sbjct: 124871 agaaagcaaatgaagatgccccagagaacaatccacagtacagaactgttta 124922
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>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           BAC clone:B1056G08
          Length = 168173

 Score =  105 bits (53), Expect = 9e-20
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                       
Query: 35  tgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttc 94
           |||||| ||||| |||||||| |||||||| |||||||| |||||||| |||||||||||
Sbjct: 333 tgatgcccgagttatgtgggatcaaaagactggaagatctagaggttatggctttgtttc 392

                            
Query: 95  cttcaggaatcaacagg 111
           |||||||||||||||||
Sbjct: 393 cttcaggaatcaacagg 409



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 147 tggcttggaaatcggcagattcgttgcaactgggcaacaaaaggcgccaacagtggcgag 206
           |||||||||| ||||||||| || ||||||||||||||||| || |||| || |||||||
Sbjct: 646 tggcttggaagtcggcagatacgctgcaactgggcaacaaagggtgccagcaatggcgag 705



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 107 acaggatgcacagagtgccataaatgacttaaatggt 143
           |||||||||||| ||||||||||||||| ||||||||
Sbjct: 492 acaggatgcacaaagtgccataaatgacctaaatggt 528



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 274  agaaatcaaacgaagatgctcctgaaaataatccattgtacagaactgttta 325
            ||||| |||| |||||||| || || || ||||||  |||||||||||||||
Sbjct: 1290 agaaagcaaatgaagatgccccagagaacaatccacagtacagaactgttta 1341
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>gb|AY104066.1| Zea mays PCO123558 mRNA sequence
          Length = 1927

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 132/161 (81%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
           ||||| |||||| | || ||||||||||| || || ||| |||| ||||| |  || |||
Sbjct: 751 tgctcagatgctagggttatgtgggaccagaaaacaggacgatccagagggtttggtttt 810

                                                                       
Query: 90  gtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttgtgg 149
           ||||| |||||||| || |||||||| || ||||| ||||||||||| |||||   ||||
Sbjct: 811 gtttctttcaggaaccagcaggatgctcaaagtgcgataaatgacttgaatgggaagtgg 870

                                                    
Query: 150 cttggaaatcggcagattcgttgcaactgggcaacaaaagg 190
           ||||| || || || ||||||||||| |||||||| |||||
Sbjct: 871 cttgggaaccgtcaaattcgttgcaattgggcaacgaaagg 911
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>gb|BT016821.1| Zea mays clone Contig654 mRNA sequence
          Length = 1819

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                        
Query: 87   tttgtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttg 146
            |||||||| |||||||| || |||||||| || ||||| ||||||||||| |||||   |
Sbjct: 1017 tttgtttctttcaggaaccagcaggatgctcaaagtgcgataaatgacttgaatgggaag 958

                                                        
Query: 147  tggcttggaaatcggcagattcgttgcaactgggcaacaaaagg 190
            |||||||| || || || ||||||||||| |||||||| |||||
Sbjct: 957  tggcttgggaaccgtcaaattcgttgcaattgggcaacgaaagg 914
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>emb|AM260507.1| Platanus acerifolia partial mRNA for oligouridylate binding protein
           (ouBP gene)
          Length = 687

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 117/143 (81%)
 Strand = Plus / Plus

                                                                       
Query: 48  atgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcaggaatcaa 107
           |||||||| |||||||| ||  | ||||||||||  || |||||||| ||  ||||||||
Sbjct: 283 atgtgggatcaaaagactgggcgctcaagaggttttgggtttgtttcttttcggaatcaa 342

                                                                       
Query: 108 caggatgcacagagtgccataaatgacttaaatggtttgtggcttggaaatcggcagatt 167
           |||||||| || ||||| |||||||| |||| |||   ||||||||| | | | ||||| 
Sbjct: 343 caggatgcccaaagtgcgataaatgatttaactggaaagtggcttggcagtagacagata 402

                                  
Query: 168 cgttgcaactgggcaacaaaagg 190
           ||||| ||||||||| |||||||
Sbjct: 403 cgttgtaactgggcagcaaaagg 425
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>dbj|AK120437.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098D14, full
            insert sequence
          Length = 1950

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 127/158 (80%)
 Strand = Plus / Plus

                                                                        
Query: 30   tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
            ||||| |||||| | ||||||||||| || || || ||| |||| |||||||  || |||
Sbjct: 852  tgctcagatgctagggtaatgtgggatcagaaaactggacgatccagaggttttggtttt 911

                                                                        
Query: 90   gtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttgtgg 149
            ||||| ||||| ||||| ||||| ||||| | ||||||||||||  | |||||   ||||
Sbjct: 912  gtttctttcagaaatcagcaggacgcacaaaatgccataaatgaactgaatgggaagtgg 971

                                                  
Query: 150  cttggaaatcggcagattcgttgcaactgggcaacaaa 187
            || || || || ||  |||||||||| |||||||||||
Sbjct: 972  ctcggcaaccgtcaagttcgttgcaattgggcaacaaa 1009
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>dbj|AK107324.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-E09, full
           insert sequence
          Length = 1512

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 127/158 (80%)
 Strand = Plus / Minus

                                                                       
Query: 30  tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
           ||||| |||||| | ||||||||||| || || || ||| |||| |||||||  || |||
Sbjct: 731 tgctcagatgctagggtaatgtgggatcagaaaactggacgatccagaggttttggtttt 672

                                                                       
Query: 90  gtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttgtgg 149
           ||||| ||||| ||||| ||||| ||||| | ||||||||||||  | |||||   ||||
Sbjct: 671 gtttctttcagaaatcagcaggacgcacaaaatgccataaatgaactgaatgggaagtgg 612

                                                 
Query: 150 cttggaaatcggcagattcgttgcaactgggcaacaaa 187
           || || || || ||  |||||||||| |||||||||||
Sbjct: 611 ctcggcaaccgtcaagttcgttgcaattgggcaacaaa 574
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>dbj|AK099639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059N16, full
            insert sequence
          Length = 1866

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 127/158 (80%)
 Strand = Plus / Plus

                                                                        
Query: 30   tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
            ||||| |||||| | ||||||||||| || || || ||| |||| |||||||  || |||
Sbjct: 846  tgctcagatgctagggtaatgtgggatcagaaaactggacgatccagaggttttggtttt 905

                                                                        
Query: 90   gtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttgtgg 149
            ||||| ||||| ||||| ||||| ||||| | ||||||||||||  | |||||   ||||
Sbjct: 906  gtttctttcagaaatcagcaggacgcacaaaatgccataaatgaactgaatgggaagtgg 965

                                                  
Query: 150  cttggaaatcggcagattcgttgcaactgggcaacaaa 187
            || || || || ||  |||||||||| |||||||||||
Sbjct: 966  ctcggcaaccgtcaagttcgttgcaattgggcaacaaa 1003
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>dbj|AK060913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G02, full
           insert sequence
          Length = 1272

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 127/158 (80%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
           ||||| |||||| | ||||||||||| || || || ||| |||| |||||||  || |||
Sbjct: 145 tgctcagatgctagggtaatgtgggatcagaaaactggacgatccagaggttttggtttt 204

                                                                       
Query: 90  gtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttgtgg 149
           ||||| ||||| ||||| ||||| ||||| | ||||||||||||  | |||||   ||||
Sbjct: 205 gtttctttcagaaatcagcaggacgcacaaaatgccataaatgaactgaatgggaagtgg 264

                                                 
Query: 150 cttggaaatcggcagattcgttgcaactgggcaacaaa 187
           || || || || ||  |||||||||| |||||||||||
Sbjct: 265 ctcggcaaccgtcaagttcgttgcaattgggcaacaaa 302
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>gb|BT013167.1| Lycopersicon esculentum clone 134230R, mRNA sequence
          Length = 1654

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 129/161 (80%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
           |||||||||||  | ||||||||||| |||||||| ||  | || |||||||  || |||
Sbjct: 670 tgctctgatgcaagggtaatgtgggatcaaaagactgggcgttctagaggttttggtttt 729

                                                                       
Query: 90  gtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttgtgg 149
           ||||| ||| | || ||||||||||| || |||||||| ||||| ||||  ||    |||
Sbjct: 730 gtttctttccgtaaccaacaggatgctcaaagtgccatcaatgatttaacaggcaaatgg 789

                                                    
Query: 150 cttggaaatcggcagattcgttgcaactgggcaacaaaagg 190
           ||||| | | ||||||| |||||||||||||| || |||||
Sbjct: 790 cttggtagtaggcagatacgttgcaactgggctaccaaagg 830
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>ref|NM_104285.2| Arabidopsis thaliana mRNA 3'-UTR binding AT1G54080 transcript
           variant AT1G54080.1 mRNA, complete cds
          Length = 1708

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||||||||||||||| || || ||| | |||||||| |  || |||||||||||| | |
Sbjct: 618 gagtaatgtgggaccagaaaactggacgctcaagaggctttggttttgtttccttccgta 677

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           |||| |||||||| || | ||||||||||||
Sbjct: 678 atcagcaggatgctcaaactgccataaatga 708
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>ref|NM_179475.1| Arabidopsis thaliana mRNA 3'-UTR binding AT1G54080 transcript
           variant AT1G54080.2 mRNA, complete cds
          Length = 1720

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||||||||||||||| || || ||| | |||||||| |  || |||||||||||| | |
Sbjct: 630 gagtaatgtgggaccagaaaactggacgctcaagaggctttggttttgtttccttccgta 689

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           |||| |||||||| || | ||||||||||||
Sbjct: 690 atcagcaggatgctcaaactgccataaatga 720
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>gb|AY133610.1| Arabidopsis thaliana At1g54080/F15I1_16 mRNA, complete cds
          Length = 1281

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||||||||||||||| || || ||| | |||||||| |  || |||||||||||| | |
Sbjct: 533 gagtaatgtgggaccagaaaactggacgctcaagaggctttggttttgtttccttccgta 592

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           |||| |||||||| || | ||||||||||||
Sbjct: 593 atcagcaggatgctcaaactgccataaatga 623
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>gb|AF361639.1| Arabidopsis thaliana At1g54080/F15I1_16 mRNA, complete cds
          Length = 1763

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||||||||||||||| || || ||| | |||||||| |  || |||||||||||| | |
Sbjct: 679 gagtaatgtgggaccagaaaactggacgctcaagaggctttggttttgtttccttccgta 738

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           |||| |||||||| || | ||||||||||||
Sbjct: 739 atcagcaggatgctcaaactgccataaatga 769
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>gb|AF348587.1| Arabidopsis thaliana clone C00207 (e) putative oligouridylate
           binding protein (At1g54080) mRNA, complete cds
          Length = 1281

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||||||||||||||| || || ||| | |||||||| |  || |||||||||||| | |
Sbjct: 533 gagtaatgtgggaccagaaaactggacgctcaagaggctttggttttgtttccttccgta 592

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           |||| |||||||| || | ||||||||||||
Sbjct: 593 atcagcaggatgctcaaactgccataaatga 623
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>emb|BX816622.1|CNS0AD7O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH59ZD09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1709

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||||||||||||||| || || ||| | |||||||| |  || |||||||||||| | |
Sbjct: 741 gagtaatgtgggaccagaaaactggacgctcaagaggctttggttttgtttccttccgta 800

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           |||| |||||||| || | ||||||||||||
Sbjct: 801 atcagcaggatgctcaaactgccataaatga 831
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>gb|DQ268861.1| Solanum tuberosum clone 180D07 oligouridylate binding protein-like
           protein mRNA, complete cds
          Length = 1570

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 128/161 (79%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgctctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggcttt 89
           |||||||||||  | ||||||||||| |||||||| ||  | || || ||||  || |||
Sbjct: 625 tgctctgatgcaagggtaatgtgggatcaaaagactgggcgttctaggggttttggtttt 684

                                                                       
Query: 90  gtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatggtttgtgg 149
           ||||| ||| | || ||||||||||| || |||||||| ||||| ||||  ||    |||
Sbjct: 685 gtttctttccgtaaccaacaggatgctcaaagtgccattaatgatttaacaggcaaatgg 744

                                                    
Query: 150 cttggaaatcggcagattcgttgcaactgggcaacaaaagg 190
           ||||| | | ||||||| |||||||||||||| || |||||
Sbjct: 745 cttggtagtaggcagatacgttgcaactgggctaccaaagg 785
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>ref|XM_483366.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1878

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 33  tctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtt 92
           |||||||||||||| ||||||||  | || |||||| | || |||||||| || ||||| 
Sbjct: 785 tctgatgctcgagtcatgtgggataacaaaaccggacgctccagaggttatggttttgtc 844

                               
Query: 93  tccttcaggaatcaacagga 112
           |||||| | |||||||||||
Sbjct: 845 tccttccgtaatcaacagga 864
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>dbj|AK069912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037G11, full
           insert sequence
          Length = 1877

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 33  tctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtt 92
           |||||||||||||| ||||||||  | || |||||| | || |||||||| || ||||| 
Sbjct: 784 tctgatgctcgagtcatgtgggataacaaaaccggacgctccagaggttatggttttgtc 843

                               
Query: 93  tccttcaggaatcaacagga 112
           |||||| | |||||||||||
Sbjct: 844 tccttccgtaatcaacagga 863
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                            
Query: 35       tgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttc 94
                |||||||||||| ||||||||  | || |||||| | || |||||||| || ||||| ||
Sbjct: 25854434 tgatgctcgagtcatgtgggataacaaaaccggacgctccagaggttatggttttgtctc 25854375

                                 
Query: 95       cttcaggaatcaacagg 111
                |||| | ||||||||||
Sbjct: 25854374 cttccgtaatcaacagg 25854358
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>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1003_A09
          Length = 150755

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                         
Query: 35    tgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttc 94
             |||||||||||| ||||||||  | || |||||| | || |||||||| || ||||| ||
Sbjct: 40221 tgatgctcgagtcatgtgggataacaaaaccggacgctccagaggttatggttttgtctc 40162

                              
Query: 95    cttcaggaatcaacagg 111
             |||| | ||||||||||
Sbjct: 40161 cttccgtaatcaacagg 40145
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>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0689E12
          Length = 147516

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                          
Query: 35     tgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttc 94
              |||||||||||| ||||||||  | || |||||| | || |||||||| || ||||| ||
Sbjct: 126645 tgatgctcgagtcatgtgggataacaaaaccggacgctccagaggttatggttttgtctc 126586

                               
Query: 95     cttcaggaatcaacagg 111
              |||| | ||||||||||
Sbjct: 126585 cttccgtaatcaacagg 126569
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>emb|AJ272011.1|NPL272011 Nicotiana plumbaginifolia mRNA for oligouridylate binding protein
           (ubp1 gene)
          Length = 1668

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 87  tttgtttccttcaggaatcaacaggatgcacagagtgccataaatgacttaaatgg 142
           ||||| |||||| | ||||| ||||| || |||||||| ||||||||||| |||||
Sbjct: 713 tttgtctccttccgtaatcagcaggaggcccagagtgcaataaatgacttgaatgg 768



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 282 aacgaagatgctcctgaaaataatcc 307
           |||||||||||||| |||||||||||
Sbjct: 908 aacgaagatgctccagaaaataatcc 933
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>gb|AY103766.1| Zea mays PCO100830 mRNA sequence
          Length = 1823

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 33  tctgatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtt 92
           |||||||||||||| ||||||||| | || || ||| | || || ||||| || ||||| 
Sbjct: 734 tctgatgctcgagtcatgtgggacaacaaaactggacgttccaggggttatggttttgtc 793

                               
Query: 93  tccttcaggaatcaacagga 112
           |||||| | |||||||||||
Sbjct: 794 tccttccgtaatcaacagga 813
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>ref|NM_112266.2| Arabidopsis thaliana mRNA 3'-UTR binding AT3G14100 mRNA, complete
           cds
          Length = 2189

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||| |||||||||||||| || ||  | || ||||| |  || |||||||||||| | |
Sbjct: 629 gagttatgtgggaccaaaaaactgggcgctcgagaggctttgggtttgtttccttccgca 688

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           ||||||||||||| || | |||||| |||||
Sbjct: 689 atcaacaggatgctcaaactgccattaatga 719
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>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region
          Length = 108553

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 146   gtggcttggaaatcggcagattcgttgcaactgggcaacaaaaggcgccaa 196
             ||||||||| || || || ||||||||||| |||||||| ||||| |||||
Sbjct: 41209 gtggcttggcaaccgtcaaattcgttgcaattgggcaacgaaaggtgccaa 41259



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 106   aacaggatgcacagagtgccataaatgacttaaatggt 143
             |||||||||| || ||||| ||||||||||| ||||||
Sbjct: 41075 aacaggatgctcaaagtgcgataaatgacttgaatggt 41112
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>gb|AY139775.1| Arabidopsis thaliana AT3g14100/MAG2_5 mRNA, complete cds
          Length = 1505

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||| |||||||||||||| || ||  | || ||||| |  || |||||||||||| | |
Sbjct: 531 gagttatgtgggaccaaaaaactgggcgctcgagaggctttgggtttgtttccttccgca 590

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           ||||||||||||| || | |||||| |||||
Sbjct: 591 atcaacaggatgctcaaactgccattaatga 621
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>emb|BX823141.1|CNS0A605 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB92ZH11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1502

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||| |||||||||||||| || ||  | || ||||| |  || |||||||||||| | |
Sbjct: 564 gagtgatgtgggaccaaaaaactgggcgctcgagaggctttgggtttgtttccttccgca 623

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           ||||||||||||| || | |||||| |||||
Sbjct: 624 atcaacaggatgctcaaactgccattaatga 654
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>emb|BX825019.1|CNS0A5JR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH8ZG03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1537

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 87  tttgtttccttcaggaatcaacaggatgcacagagtgccataaatga 133
           |||||||||||| | |||||||||||||| || | |||||| |||||
Sbjct: 608 tttgtttccttccgcaatcaacaggatgctcaaactgccattaatga 654
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>gb|BT004540.1| Arabidopsis thaliana AT3g14100/MAG2_5 gene, complete cds
          Length = 1284

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||| |||||||||||||| || ||  | || ||||| |  || |||||||||||| | |
Sbjct: 521 gagttatgtgggaccaaaaaactgggcgctcgagaggctttgggtttgtttccttccgca 580

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           ||||||||||||| || | |||||| |||||
Sbjct: 581 atcaacaggatgctcaaactgccattaatga 611
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>gb|AY087692.1| Arabidopsis thaliana clone 37712 mRNA, complete sequence
          Length = 1557

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                       
Query: 43  gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
           |||| |||||||||||||| || ||  | || ||||| |  || |||||||||||| | |
Sbjct: 584 gagttatgtgggaccaaaaaactgggcgctcgagaggctttgggtttgtttccttccgca 643

                                          
Query: 103 atcaacaggatgcacagagtgccataaatga 133
           ||||||||||||| || | |||||| |||||
Sbjct: 644 atcaacaggatgctcaaactgccattaatga 674
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>gb|AF528565.1| Zea mays cultivar BSSS53 chromosome 4 clone BAC 072, complete sequence
          Length = 106246

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 106   aacaggatgcacagagtgccataaatgacttaaatggt 143
             |||||||||| || ||||| ||||||||||| ||||||
Sbjct: 26043 aacaggatgctcaaagtgcgataaatgacttgaatggt 26080



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 146   gtggcttggaaatcggcagattcgttgcaactgggcaacaaaagg 190
             ||||||||| || || || ||||||||||| |||||||| |||||
Sbjct: 26178 gtggcttgggaaccgtcaaattcgttgcaattgggcaacgaaagg 26222
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>gb|AC141880.3| Mus musculus BAC clone RP24-220N1 from chromosome 15, complete sequence
          Length = 185646

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 89    tgtttccttcaggaatcaacag 110
             ||||||||||||||||||||||
Sbjct: 73315 tgtttccttcaggaatcaacag 73294
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>emb|Z71292.1|SCYNL016W S.cerevisiae chromosome XIV reading frame ORF YNL016w
          Length = 2998

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 72   tcaagaggttacggctttgtttcctt 97
            |||||||||||||| |||||||||||
Sbjct: 1125 tcaagaggttacggttttgtttcctt 1150
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>gb|L20767.1|YSCPUB1P Saccharomyces cerevisiae poly(A)+ RNA-binding protein (PUB1) gene,
            complete cds
          Length = 2675

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 72   tcaagaggttacggctttgtttcctt 97
            |||||||||||||| |||||||||||
Sbjct: 1205 tcaagaggttacggttttgtttcctt 1230
to top
>gb|L13725.1|YSCPUB1X Yeast nuclear and cytoplasmic polyadenylated RNA-binding protein
           (PUB1) gene, complete cds
          Length = 2256

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 72  tcaagaggttacggctttgtttcctt 97
           |||||||||||||| |||||||||||
Sbjct: 899 tcaagaggttacggttttgtttcctt 924
to top
>gb|L01797.1|YSCRNABIND Saccharomyces cerevisiae putative RNA-binding protein, complete cds
          Length = 1709

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 72  tcaagaggttacggctttgtttcctt 97
           |||||||||||||| |||||||||||
Sbjct: 924 tcaagaggttacggttttgtttcctt 949
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>gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, complete sequence
          Length = 180660

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 125  cataaatgacttaaatggttt 145
            |||||||||||||||||||||
Sbjct: 5415 cataaatgacttaaatggttt 5435
to top
>gb|AC182692.2| Populus trichocarpa clone Pop1-44B2, complete sequence
          Length = 105327

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 162  cagattcgttgcaactgggca 182
            |||||||||||||||||||||
Sbjct: 1621 cagattcgttgcaactgggca 1641
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>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence
          Length = 225183

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 125   cataaatgacttaaatggttt 145
             |||||||||||||||||||||
Sbjct: 47415 cataaatgacttaaatggttt 47435
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>emb|AL713962.14| Mouse DNA sequence from clone RP23-3D5 on chromosome 11, complete
             sequence
          Length = 230198

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 263   aaatgcaaagcagaaatcaaacgaagatg 291
             |||||||||| ||||| ||||||||||||
Sbjct: 45182 aaatgcaaagaagaaaccaaacgaagatg 45154
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>ref|NM_133083.1| Drosophila melanogaster CG15040-RA (CG15040), mRNA
          Length = 5688

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 259  cagaaaatgcaaagcagaaatcaaa 283
            ||||| |||||||||||||||||||
Sbjct: 5233 cagaacatgcaaagcagaaatcaaa 5257
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>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone
             BACR17H16, complete sequence
          Length = 182080

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 259   cagaaaatgcaaagcagaaatcaaa 283
             ||||| |||||||||||||||||||
Sbjct: 99783 cagaacatgcaaagcagaaatcaaa 99759
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>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence
          Length = 170353

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 125    cataaatgacttaaatggttt 145
              |||||||||||||||||||||
Sbjct: 137593 cataaatgacttaaatggttt 137613
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>gb|AC006577.2|F15I1 Sequence of BAC F15I1 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 89035

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 43    gagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttccttcagga 102
             |||||||||||||||| || || ||| | |||||||| |  || |||||||||||| | |
Sbjct: 45714 gagtaatgtgggaccagaaaactggacgctcaagaggctttggttttgtttccttccgta 45655

                      
Query: 103   atcaacagg 111
             |||| ||||
Sbjct: 45654 atcagcagg 45646
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>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete
              sequence
          Length = 315109

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 259    cagaaaatgcaaagcagaaatcaaa 283
              ||||| |||||||||||||||||||
Sbjct: 164207 cagaacatgcaaagcagaaatcaaa 164183
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>emb|CR392352.6| Zebrafish DNA sequence from clone DKEYP-106C3 in linkage group 2,
            complete sequence
          Length = 111994

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  caacaaaaggcgccaacagtg 201
            |||||||||||||||||||||
Sbjct: 2745 caacaaaaggcgccaacagtg 2725
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>emb|CT030646.6| Mouse DNA sequence from clone RP23-222A16 on chromosome 13, complete
              sequence
          Length = 195169

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 256    tcacagaaaatgcaaagcaga 276
              |||||||||||||||||||||
Sbjct: 160947 tcacagaaaatgcaaagcaga 160927
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>emb|AL928601.6| Mouse DNA sequence from clone RP23-88B5 on chromosome 11, complete
            sequence
          Length = 55129

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 248  taacaatttcacagaaaatgcaaag 272
            ||||||||||| |||||||||||||
Sbjct: 9270 taacaatttcagagaaaatgcaaag 9246
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>ref|NM_101598.2| Arabidopsis thaliana mRNA 3'-UTR binding AT1G17370 mRNA, complete
           cds
          Length = 1772

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 160 ggcagattcgttgcaactgggcaacaaa 187
           ||||||| |||||||||||||| |||||
Sbjct: 835 ggcagatacgttgcaactgggcgacaaa 862
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>gb|AC111071.8| Mus musculus chromosome 15, clone RP24-298N6, complete sequence
          Length = 157812

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 264  aatgcaaagcagaaatcaaa 283
            ||||||||||||||||||||
Sbjct: 3782 aatgcaaagcagaaatcaaa 3763
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>gb|AC163443.6| Mus musculus chromosome 15, clone RP23-284G17, complete sequence
          Length = 213017

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    aatgcaaagcagaaatcaaa 283
              ||||||||||||||||||||
Sbjct: 175166 aatgcaaagcagaaatcaaa 175147
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>ref|XM_718783.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03686)
           partial mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 240 gatgtaaataacaatttcacagaa 263
           ||||||||||||||||| ||||||
Sbjct: 451 gatgtaaataacaatttgacagaa 474
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>ref|XM_738659.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000621.02.0)
           partial mRNA
          Length = 1419

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 ataacaatttcacagaaaat 266
           ||||||||||||||||||||
Sbjct: 398 ataacaatttcacagaaaat 417
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>gb|AF362517.1| Campoletis sonorensis ichnovirus segment M, complete sequence
          Length = 10223

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  ccattgtacagaactgttta 325
            ||||||||||||||||||||
Sbjct: 8813 ccattgtacagaactgttta 8832
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>emb|AL450426.7| Human DNA sequence from clone RP11-317C20 on chromosome 9 Contains five
             novel olfactory (seven transmembrane helix) receptor
             genes, a pseudogene similar to part of novel olfactory
             (seven transmembrane helix) receptor and a CpG island,
             complete sequence
          Length = 136002

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   tatagttgatgtaaataaca 252
             ||||||||||||||||||||
Sbjct: 24088 tatagttgatgtaaataaca 24107
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>ref|XM_786323.1| PREDICTED: Strongylocentrotus purpuratus similar to proprotein
           convertase subtilisin/kexin type 9 preproprotein
           (LOC586545), mRNA
          Length = 2349

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 aatgcaaagcagaaatcaaa 283
           ||||||||||||||||||||
Sbjct: 193 aatgcaaagcagaaatcaaa 212
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>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034K24, complete sequence
          Length = 142852

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                         
Query: 36    gatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttcc 95
             |||||| | ||||||||||| || || || ||| |||| |||||||  || |||||||| 
Sbjct: 68444 gatgctagggtaatgtgggatcagaaaactggacgatccagaggttttggttttgtttct 68503

                             
Query: 96    ttcaggaatcaacagg 111
             ||||| ||||| ||||
Sbjct: 68504 ttcagaaatcagcagg 68519
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>gb|AC154602.3| Mus musculus BAC clone RP23-343M11 from chromosome 17, complete
             sequence
          Length = 196564

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   tgaaaataatccattgtaca 315
             ||||||||||||||||||||
Sbjct: 22267 tgaaaataatccattgtaca 22248
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      ttgtttccttcaggaatcaa 107
               ||||||||||||||||||||
Sbjct: 2054704 ttgtttccttcaggaatcaa 2054685
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>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome unknown,
              complete sequence
          Length = 199332

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     tgtttccttcaggaatcaac 108
              ||||||||||||||||||||
Sbjct: 109630 tgtttccttcaggaatcaac 109649
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>ref|NM_079542.2| Drosophila melanogaster -Esterase-4 CG1082-RA (alpha-Est4), mRNA
          Length = 1742

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  aggcgccaacagtggcgagg 207
            ||||||||||||||||||||
Sbjct: 982  aggcgccaacagtggcgagg 1001
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>gb|AY070981.1| Drosophila melanogaster RE07760 full length cDNA
          Length = 1740

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  aggcgccaacagtggcgagg 207
            ||||||||||||||||||||
Sbjct: 981  aggcgccaacagtggcgagg 1000
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>gb|AC003046.4| Homo sapiens Xp22 PACs RPC11-263P4 and RPC11-164K3 complete sequence
          Length = 166757

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 290    tgctcctgaaaataatccattgta 313
              |||| |||||||||||||||||||
Sbjct: 161014 tgctgctgaaaataatccattgta 160991
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                            
Query: 36       gatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttcc 95
                |||||| | ||||||||||| || || || ||| |||| |||||||  || |||||||| 
Sbjct: 23318531 gatgctagggtaatgtgggatcagaaaactggacgatccagaggttttggttttgtttct 23318472

                                
Query: 96       ttcaggaatcaacagg 111
                ||||| ||||| ||||
Sbjct: 23318471 ttcagaaatcagcagg 23318456
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>emb|BX815461.1|CNS0ACRK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS62ZC06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1573

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 160 ggcagattcgttgcaactgggcaacaaa 187
           ||||||| |||||||||||||| |||||
Sbjct: 707 ggcagatacgttgcaactgggcgacaaa 734
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>emb|BX814983.1|CNS0ACXV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS21ZG05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1504

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 160 ggcagattcgttgcaactgggcaacaaa 187
           ||||||| |||||||||||||| |||||
Sbjct: 668 ggcagatacgttgcaactgggcgacaaa 695
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>gb|AC011253.4|AC011253 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone
             BACR37K05, complete sequence
          Length = 197597

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   aggcgccaacagtggcgagg 207
             ||||||||||||||||||||
Sbjct: 43428 aggcgccaacagtggcgagg 43409
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>gb|AC008312.4|AC008312 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone
              BACR06G09, complete sequence
          Length = 188459

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    aggcgccaacagtggcgagg 207
              ||||||||||||||||||||
Sbjct: 170905 aggcgccaacagtggcgagg 170886
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>gb|AC154458.2| Mus musculus BAC clone RP24-162I9 from chromosome 17, complete sequence
          Length = 183027

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    tgaaaataatccattgtaca 315
              ||||||||||||||||||||
Sbjct: 153058 tgaaaataatccattgtaca 153039
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>gb|AC005859.1| Homo sapiens X BAC GSHB-324M7 (Genome Systems Human BAC Library) complete
              sequence
          Length = 202879

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 290    tgctcctgaaaataatccattgta 313
              |||| |||||||||||||||||||
Sbjct: 151689 tgctgctgaaaataatccattgta 151712
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>gb|AY085705.1| Arabidopsis thaliana clone 17210 mRNA, complete sequence
          Length = 1629

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 160 ggcagattcgttgcaactgggcaacaaa 187
           ||||||| |||||||||||||| |||||
Sbjct: 743 ggcagatacgttgcaactgggcgacaaa 770
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>gb|AC007843.6|AC007843 Arabidopsis thaliana chromosome I BAC F28G4 genomic sequence, complete
             sequence
          Length = 84974

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 160   ggcagattcgttgcaactgggcaacaaa 187
             ||||||| |||||||||||||| |||||
Sbjct: 62835 ggcagatacgttgcaactgggcgacaaa 62862
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>gb|AC022492.5|AC022492 Genomic sequence for Arabidopsis thaliana BAC F1L3 from chromosome I,
            complete sequence
          Length = 127968

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 160  ggcagattcgttgcaactgggcaacaaa 187
            ||||||| |||||||||||||| |||||
Sbjct: 6522 ggcagatacgttgcaactgggcgacaaa 6495
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>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence
          Length = 77605

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                         
Query: 36    gatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttcc 95
             |||||| | ||||||||||| || || || ||| |||| |||||||  || |||||||| 
Sbjct: 61344 gatgctagggtaatgtgggatcagaaaactggacgatccagaggttttggttttgtttct 61403

                             
Query: 96    ttcaggaatcaacagg 111
             ||||| ||||| ||||
Sbjct: 61404 ttcagaaatcagcagg 61419
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>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete
             sequence
          Length = 70311

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                         
Query: 36    gatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttcc 95
             |||||| | ||||||||||| || || || ||| |||| |||||||  || |||||||| 
Sbjct: 53900 gatgctagggtaatgtgggatcagaaaactggacgatccagaggttttggttttgtttct 53959

                             
Query: 96    ttcaggaatcaacagg 111
             ||||| ||||| ||||
Sbjct: 53960 ttcagaaatcagcagg 53975
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>gb|AE003671.4| Drosophila melanogaster chromosome 3R, section 13 of 118 of the complete
              sequence
          Length = 315844

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    aggcgccaacagtggcgagg 207
              ||||||||||||||||||||
Sbjct: 149847 aggcgccaacagtggcgagg 149828
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                            
Query: 36       gatgctcgagtaatgtgggaccaaaagaccggaagatcaagaggttacggctttgtttcc 95
                |||||| | ||||||||||| || || || ||| |||| |||||||  || |||||||| 
Sbjct: 23628441 gatgctagggtaatgtgggatcagaaaactggacgatccagaggttttggttttgtttct 23628382

                                
Query: 96       ttcaggaatcaacagg 111
                ||||| ||||| ||||
Sbjct: 23628381 ttcagaaatcagcagg 23628366
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>gb|U51046.1|DMU51046 Drosophila melanogaster alpha esterase (aE4) gene, complete cds
          Length = 2100

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  aggcgccaacagtggcgagg 207
            ||||||||||||||||||||
Sbjct: 1291 aggcgccaacagtggcgagg 1310


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,261,248
Number of Sequences: 3902068
Number of extensions: 3261248
Number of successful extensions: 79550
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79271
Number of HSP's gapped (non-prelim): 274
length of query: 325
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 303
effective length of database: 17,147,199,772
effective search space: 5195601530916
effective search space used: 5195601530916
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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