ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet58f05 |
|---|---|
| Clone Library Name | barley_pub |
>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Protein Xantha-l) Length = 417 Score = 69.7 bits (169), Expect(2) = 4e-25 Identities = 33/33 (100%), Positives = 33/33 (100%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQL 344 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQL Sbjct: 66 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQL 98 Score = 62.8 bits (151), Expect(2) = 4e-25 Identities = 30/30 (100%), Positives = 30/30 (100%) Frame = +1 Query: 52 MASAMELSLLNPAMHHYGIAAKTASHLPVV 141 MASAMELSLLNPAMHHYGIAAKTASHLPVV Sbjct: 1 MASAMELSLLNPAMHHYGIAAKTASHLPVV 30
>CRD1_EUPES (Q945B7) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 60.5 bits (145), Expect = 1e-09 Identities = 27/33 (81%), Positives = 30/33 (90%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQL 344 K E+NE+LLTPRFYTTDFDEME LFN EINK+L Sbjct: 54 KKEINETLLTPRFYTTDFDEMETLFNTEINKKL 86
>CRD1_ARATH (Q9M591) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Copper response defect 1 protein) (Dicarboxylate diiron protein) (AtZIP Length = 409 Score = 59.7 bits (143), Expect = 2e-09 Identities = 27/33 (81%), Positives = 29/33 (87%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQL 344 K E+ ESLLTPRFYTTDF+EMEQLFN EINK L Sbjct: 58 KKEIQESLLTPRFYTTDFEEMEQLFNTEINKNL 90
>CRD1_GOSHI (Q6SJV8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 57.8 bits (138), Expect = 7e-09 Identities = 26/33 (78%), Positives = 28/33 (84%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQL 344 KT + E+LLTPRFYTTDFDEME LFN EINK L Sbjct: 54 KTAIKETLLTPRFYTTDFDEMEALFNTEINKNL 86
>CRD1_CHLRE (Q9LD46) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) (Copper response defect 1 protein) (Copper-response target 1 protein Length = 407 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/33 (72%), Positives = 26/33 (78%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQL 344 K E+LLTPRFYTTDFDEMEQLF+ EIN L Sbjct: 56 KVAAKETLLTPRFYTTDFDEMEQLFSKEINPNL 88
>CTH1_CHLRE (Q9AR22) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) (Copper target homolog 1 protein) Length = 407 Score = 51.2 bits (121), Expect = 6e-07 Identities = 22/33 (66%), Positives = 28/33 (84%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQL 344 K +E+LLTPRFYTTDFDEME+LF+ E+NK + Sbjct: 56 KVASDETLLTPRFYTTDFDEMERLFSLELNKNM 88
>ACSF_GRATL (Q6B8U1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 41.6 bits (96), Expect = 5e-04 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQL 317 +T V E+LLTPRFYTTDFDEM +L Sbjct: 9 QTPVKETLLTPRFYTTDFDEMSKL 32
>ACSF1_SYNY3 (P72584) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 358 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQL 317 KT E++LTPRFYTTDFDEM ++ Sbjct: 18 KTPAKETILTPRFYTTDFDEMAKM 41
>ACSF3_ANASP (Q8YRZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 3 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 3) Length = 358 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQL 317 K E+LLTPRFYTTDFDEM ++ Sbjct: 18 KVPAKETLLTPRFYTTDFDEMARM 41
>ACSF2_SYNY3 (P74134) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 37.4 bits (85), Expect = 0.009 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQL 317 K V E+LLTPRFYTTDFD++ L Sbjct: 18 KAPVKETLLTPRFYTTDFDKVANL 41
>ACSF2_ANASP (Q8YVU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 36.6 bits (83), Expect = 0.016 Identities = 16/24 (66%), Positives = 18/24 (75%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQL 317 K V E+LLTPRFYTTDFD + L Sbjct: 18 KAPVQETLLTPRFYTTDFDAVANL 41
>ACSF_SYNPX (Q7U6Y8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 356 Score = 35.8 bits (81), Expect = 0.027 Identities = 14/21 (66%), Positives = 18/21 (85%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEM 308 K V +++LTPRFYTTDFD+M Sbjct: 16 KDPVKDTILTPRFYTTDFDDM 36
>ACSF_PORPU (P51277) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 35.8 bits (81), Expect = 0.027 Identities = 17/27 (62%), Positives = 21/27 (77%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEMEQLFNAEINKQ 341 E+LLTPRFYTTDF+EM + N N+Q Sbjct: 14 ETLLTPRFYTTDFEEMASM-NISENEQ 39
>ACSF_CYACA (Q9TLR8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 354 Score = 35.4 bits (80), Expect = 0.035 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQ 314 K + E+LL PRFYTTDFDE+ + Sbjct: 11 KKTIKETLLAPRFYTTDFDEISR 33
>ACSF2_SYNEL (Q8DI68) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 354 Score = 34.7 bits (78), Expect = 0.060 Identities = 15/30 (50%), Positives = 22/30 (73%) Frame = +3 Query: 255 VNESLLTPRFYTTDFDEMEQLFNAEINKQL 344 + E+LLTPRFYTTDF++ +L + +QL Sbjct: 17 IRENLLTPRFYTTDFEQAAKLDLSRQQEQL 46
>ACSF_GLOVI (Q7NFA1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 346 Score = 34.3 bits (77), Expect = 0.078 Identities = 14/24 (58%), Positives = 20/24 (83%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQL 317 ++E E+LLTPRFYTTDF+ + +L Sbjct: 13 QSERRETLLTPRFYTTDFEALAKL 36
>ACSF_CYAME (Q85FX6) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 335 Score = 33.9 bits (76), Expect = 0.10 Identities = 13/16 (81%), Positives = 16/16 (100%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEM 308 ++LLTPRFYTTDFD+M Sbjct: 12 QTLLTPRFYTTDFDQM 27
>ACSF1_SYNEL (Q8DJ05) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 380 Score = 33.9 bits (76), Expect = 0.10 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQL 344 K E++LTPRFYTTDF+ M + E +L Sbjct: 18 KAPAKETILTPRFYTTDFEAMANMDITENKAEL 50
>ACSF_SYNP6 (Q5MZZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 33.9 bits (76), Expect = 0.10 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQL 317 K E++LTPRFYTTDF+ M ++ Sbjct: 18 KAPAKETILTPRFYTTDFEAMAKM 41
>ACSF1_ANASP (Q8YX57) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 351 Score = 32.7 bits (73), Expect = 0.23 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQL 317 KT E++LTPRFYTTDF+ L Sbjct: 11 KTPSKETVLTPRFYTTDFETAANL 34
>ACSF_PROMP (Q7V1M1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 390 Score = 32.0 bits (71), Expect = 0.39 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQL 317 K +++LTP FYTTDF+ ME++ Sbjct: 18 KDIAKDTILTPNFYTTDFEAMEKM 41
>ACSF_PROMM (Q7V3Y9) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 30.8 bits (68), Expect = 0.87 Identities = 11/17 (64%), Positives = 17/17 (100%) Frame = +3 Query: 255 VNESLLTPRFYTTDFDE 305 ++++LLTPRFYTT+FD+ Sbjct: 23 LDDNLLTPRFYTTEFDK 39
>ACSF_RHOPA (Q6N9J7) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 365 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/19 (57%), Positives = 17/19 (89%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEMEQL 317 +++LTPRFYTTD+ M++L Sbjct: 31 DTILTPRFYTTDYAAMDKL 49
>ACSF_PROMA (Q7VBV0) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 347 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/17 (64%), Positives = 17/17 (100%) Frame = +3 Query: 255 VNESLLTPRFYTTDFDE 305 ++E+LLTPRFYTT+F++ Sbjct: 21 LDENLLTPRFYTTEFEK 37
>FANCJ_CHICK (Q3YK19) Fanconi anemia group J protein homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase BRIP1) (Protein FACJ) Length = 1252 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Frame = +3 Query: 6 SSLPFRAVCHSRSSED----GVRHGA 71 +SLP R VCHSRS G HGA Sbjct: 86 ASLPCRCVCHSRSESSEATAGASHGA 111
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 27.3 bits (59), Expect = 9.6 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = +3 Query: 9 SLPFRAVCHSRSSEDGVRHGALPPQPRNAPLRHRRQNGLPPPGCP 143 +LP SRS D R G PP P + P G PPP P Sbjct: 394 ALPATPQLPSRSGVDSPRSGPRPPLPPDRP-----SAGAPPPPPP 433 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,242,426 Number of Sequences: 219361 Number of extensions: 507847 Number of successful extensions: 1834 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1720 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1833 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
