ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet58e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK100355.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 7e-51
2gb|BT024017.1| Zea mays clone EL01N0401A06 mRNA sequence 172 4e-40
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 111 1e-21
4gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 111 1e-21
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 111 1e-21
6gb|BT020530.1| Arabidopsis thaliana At3g17000 mRNA, complete cds 52 0.001
7ref|NM_112576.2| Arabidopsis thaliana ubiquitin conjugating enzy... 52 0.001
8gb|AF386935.1|AF386935 Arabidopsis thaliana Unknown protein (K14... 52 0.001
9emb|BX822676.1|CNS0A64H Arabidopsis thaliana Full-length cDNA Co... 52 0.001
10emb|BX823821.1|CNS0A5CS Arabidopsis thaliana Full-length cDNA Co... 52 0.001
11emb|BX825160.1|CNS0A54S Arabidopsis thaliana Full-length cDNA Co... 52 0.001
12dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 52 0.001
13gb|DQ027045.1| Arabidopsis thaliana ubiquitinating enzyme (At3g1... 52 0.001
14emb|AJ718833.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC34-2-15... 48 0.016
15emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-8... 42 0.96
16ref|XM_592847.2| PREDICTED: Bos taurus similar to kinesin family... 40 3.8
17gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 3.8
18gb|BC029286.1| Mus musculus kinesin family member 1C, mRNA (cDNA... 40 3.8
19gb|BC006188.1| Mus musculus kinesin family member 1C, mRNA (cDNA... 40 3.8
20gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 40 3.8
21emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chr... 40 3.8
22emb|AL590448.1|CNS07EGF chromosome VIII of strain GB-M1 of Encep... 40 3.8
23emb|CR933735.5| Mouse DNA sequence from clone DN-199E5 on chromo... 40 3.8
24gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, comp... 40 3.8
25gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, comple... 40 3.8
26dbj|AK046574.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 3.8
27ref|NM_153103.1| Mus musculus kinesin family member 1C (Kif1c), ... 40 3.8
28gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromos... 40 3.8
29dbj|AK173007.1| Mus musculus mRNA for mKIAA0706 protein 40 3.8
30gb|AC170740.3| Sorex araneus clone SA_Ba-535D8, complete sequence 40 3.8
31dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 3.8
32dbj|AB074017.1| Mus musculus kif1C mRNA for kinesin superfamily ... 40 3.8

>dbj|AK100355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083I20, full
           insert sequence
          Length = 1369

 Score =  208 bits (105), Expect = 7e-51
 Identities = 174/197 (88%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagttcaaccggagtaacccggcggtgaagcggatcctgcaggaggtgaaggagatgcag 153
           |||| ||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 124 aagtacaaccggggcaacccggcggtgaagcggatccttcaggaggtcaaggagatgcag 183

                                                                       
Query: 154 tctaatccttcccccgatttcatggccctgcccctcgaggaggacatttttgagtggcag 213
           || || || ||||| || ||||||||| ||||||||||||||||||| || |||||||| 
Sbjct: 184 tccaacccgtccccggacttcatggccatgcccctcgaggaggacatcttcgagtggcaa 243

                                                                       
Query: 214 tttgctatcctggggcctcgagacagcgaatttgagggaggaatctaccacgggaggatc 273
           ||||| ||||||||||| |||||||| || |||||||||||||||||||| || ||||||
Sbjct: 244 tttgcgatcctggggccacgagacagtgagtttgagggaggaatctaccatggaaggatc 303

                            
Query: 274 cagttgccctcagacta 290
           ||| |||| || |||||
Sbjct: 304 cagctgccatcggacta 320



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>gb|BT024017.1| Zea mays clone EL01N0401A06 mRNA sequence
          Length = 1152

 Score =  172 bits (87), Expect = 4e-40
 Identities = 159/183 (86%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagttcaaccggagtaacccggcggtgaagcggatcctgcaggaggtgaaggagatgcag 153
           |||| |||||| || |||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 49  aagtacaaccgaagcaacccggcagtgaagcggatcctgcaggaggttaaggagatgcag 108

                                                                       
Query: 154 tctaatccttcccccgatttcatggccctgcccctcgaggaggacatttttgagtggcag 213
           || || || || ||||| ||||||||||| ||||||||||| ||||| || |||||||| 
Sbjct: 109 tccaacccctcacccgacttcatggccctccccctcgaggaagacatcttcgagtggcaa 168

                                                                       
Query: 214 tttgctatcctggggcctcgagacagcgaatttgagggaggaatctaccacgggaggatc 273
           ||||||||||| || ||  |||||||||| |||||||| |||||||| || || ||||||
Sbjct: 169 tttgctatccttggcccgagagacagcgagtttgagggtggaatctatcatggcaggatc 228

              
Query: 274 cag 276
           |||
Sbjct: 229 cag 231



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  111 bits (56), Expect = 1e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                            
Query: 94       aagttcaaccggagtaacccggcggtgaagcggatcctgcaggaggtgaaggagatgcag 153
                |||| ||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 10934811 aagtacaaccggggcaacccggcggtgaagcggatccttcaggaggtcaaggagatgcag 10934870

                                                        
Query: 154      tctaatccttcccccgatttcatggccctgcccctcgagg 193
                || || || ||||| || ||||||||| ||||||||||||
Sbjct: 10934871 tccaacccgtccccggacttcatggccatgcccctcgagg 10934910



 Score =  103 bits (52), Expect = 3e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                            
Query: 191      aggaggacatttttgagtggcagtttgctatcctggggcctcgagacagcgaatttgagg 250
                |||||||||| || |||||||| ||||| ||||||||||| |||||||| || |||||||
Sbjct: 10935343 aggaggacatcttcgagtggcaatttgcgatcctggggccacgagacagtgagtttgagg 10935402

                                                        
Query: 251      gaggaatctaccacgggaggatccagttgccctcagacta 290
                ||||||||||||| || ||||||||| |||| || |||||
Sbjct: 10935403 gaggaatctaccatggaaggatccagctgccatcggacta 10935442



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>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score =  111 bits (56), Expect = 1e-21
 Identities = 89/100 (89%)
 Strand = Plus / Minus

                                                                         
Query: 94    aagttcaaccggagtaacccggcggtgaagcggatcctgcaggaggtgaaggagatgcag 153
             |||| ||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 46218 aagtacaaccggggcaacccggcggtgaagcggatccttcaggaggtcaaggagatgcag 46159

                                                     
Query: 154   tctaatccttcccccgatttcatggccctgcccctcgagg 193
             || || || ||||| || ||||||||| ||||||||||||
Sbjct: 46158 tccaacccgtccccggacttcatggccatgcccctcgagg 46119



 Score =  103 bits (52), Expect = 3e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                         
Query: 191   aggaggacatttttgagtggcagtttgctatcctggggcctcgagacagcgaatttgagg 250
             |||||||||| || |||||||| ||||| ||||||||||| |||||||| || |||||||
Sbjct: 45686 aggaggacatcttcgagtggcaatttgcgatcctggggccacgagacagtgagtttgagg 45627

                                                     
Query: 251   gaggaatctaccacgggaggatccagttgccctcagacta 290
             ||||||||||||| || ||||||||| |||| || |||||
Sbjct: 45626 gaggaatctaccatggaaggatccagctgccatcggacta 45587



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  111 bits (56), Expect = 1e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                            
Query: 94       aagttcaaccggagtaacccggcggtgaagcggatcctgcaggaggtgaaggagatgcag 153
                |||| ||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 10932912 aagtacaaccggggcaacccggcggtgaagcggatccttcaggaggtcaaggagatgcag 10932971

                                                        
Query: 154      tctaatccttcccccgatttcatggccctgcccctcgagg 193
                || || || ||||| || ||||||||| ||||||||||||
Sbjct: 10932972 tccaacccgtccccggacttcatggccatgcccctcgagg 10933011



 Score =  103 bits (52), Expect = 3e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                            
Query: 191      aggaggacatttttgagtggcagtttgctatcctggggcctcgagacagcgaatttgagg 250
                |||||||||| || |||||||| ||||| ||||||||||| |||||||| || |||||||
Sbjct: 10933444 aggaggacatcttcgagtggcaatttgcgatcctggggccacgagacagtgagtttgagg 10933503

                                                        
Query: 251      gaggaatctaccacgggaggatccagttgccctcagacta 290
                ||||||||||||| || ||||||||| |||| || |||||
Sbjct: 10933504 gaggaatctaccatggaaggatccagctgccatcggacta 10933543



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>gb|BT020530.1| Arabidopsis thaliana At3g17000 mRNA, complete cds
          Length = 930

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 112 ccggcggtgaagcggatcctgcaggaggtgaaggagatgcagtctaatcc 161
           |||||||||||| ||||  |||||||||| |||||||||||  |||||||
Sbjct: 31  ccggcggtgaagaggattttgcaggaggttaaggagatgcaagctaatcc 80



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>ref|NM_112576.2| Arabidopsis thaliana ubiquitin conjugating enzyme AT3G17000 mRNA,
           complete cds
          Length = 1263

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 112 ccggcggtgaagcggatcctgcaggaggtgaaggagatgcagtctaatcc 161
           |||||||||||| ||||  |||||||||| |||||||||||  |||||||
Sbjct: 148 ccggcggtgaagaggattttgcaggaggttaaggagatgcaagctaatcc 197



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>gb|AF386935.1|AF386935 Arabidopsis thaliana Unknown protein (K14A17.7) mRNA, complete cds
          Length = 1194

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 112 ccggcggtgaagcggatcctgcaggaggtgaaggagatgcagtctaatcc 161
           |||||||||||| ||||  |||||||||| |||||||||||  |||||||
Sbjct: 147 ccggcggtgaagaggattttgcaggaggttaaggagatgcaagctaatcc 196



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>emb|BX822676.1|CNS0A64H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB58ZB02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1158

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 112 ccggcggtgaagcggatcctgcaggaggtgaaggagatgcagtctaatcc 161
           |||||||||||| ||||  |||||||||| |||||||||||  |||||||
Sbjct: 80  ccggcggtgaagaggattttgcaggaggttaaggagatgcaagctaatcc 129



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>emb|BX823821.1|CNS0A5CS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS7ZD11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1128

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 112 ccggcggtgaagcggatcctgcaggaggtgaaggagatgcagtctaatcc 161
           |||||||||||| ||||  |||||||||| |||||||||||  |||||||
Sbjct: 93  ccggcggtgaagaggattttgcaggaggttaaggagatgcaagctaatcc 142



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>emb|BX825160.1|CNS0A54S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL17ZE04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1195

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 112 ccggcggtgaagcggatcctgcaggaggtgaaggagatgcagtctaatcc 161
           |||||||||||| ||||  |||||||||| |||||||||||  |||||||
Sbjct: 112 ccggcggtgaagaggattttgcaggaggttaaggagatgcaagctaatcc 161



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>dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14A17
          Length = 92620

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 112   ccggcggtgaagcggatcctgcaggaggtgaaggagatgcagtctaatcc 161
             |||||||||||| ||||  |||||||||| |||||||||||  |||||||
Sbjct: 29126 ccggcggtgaagaggattttgcaggaggttaaggagatgcaagctaatcc 29175



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>gb|DQ027045.1| Arabidopsis thaliana ubiquitinating enzyme (At3g17000) mRNA,
           complete cds
          Length = 822

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 112 ccggcggtgaagcggatcctgcaggaggtgaaggagatgcagtctaatcc 161
           |||||||||||| ||||  |||||||||| |||||||||||  |||||||
Sbjct: 31  ccggcggtgaagaggattttgcaggaggttaaggagatgcaagctaatcc 80



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>emb|AJ718833.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC34-2-155, cultivar Bright
           Yellow 2
          Length = 111

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 gagatgcagtctaatccttcccccgatttcatggccctgcccctcgaggaggacattttt 204
           |||||||| ||||||||||||   |||||||||  ||| || ||||||||| |||| |||
Sbjct: 110 gagatgcaatctaatccttccgatgatttcatgagccttcctctcgaggagaacatcttt 51

                   
Query: 205 gagtggca 212
           || |||||
Sbjct: 50  gaatggca 43



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>emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-872J21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188020

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 127    atcctgcaggaggtgaaggagatgc 151
              ||||||||||||||||||| |||||
Sbjct: 157864 atcctgcaggaggtgaaggggatgc 157840



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>ref|XM_592847.2| PREDICTED: Bos taurus similar to kinesin family member 1C
            (LOC514928), mRNA
          Length = 3387

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  ggatcctgcaggaggtgaag 144
            ||||||||||||||||||||
Sbjct: 2663 ggatcctgcaggaggtgaag 2682



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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 127     atcctgcaggaggtgaagga 146
               ||||||||||||||||||||
Sbjct: 3674072 atcctgcaggaggtgaagga 3674091



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>gb|BC029286.1| Mus musculus kinesin family member 1C, mRNA (cDNA clone
            IMAGE:4951806)
          Length = 3168

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  ggatcctgcaggaggtgaag 144
            ||||||||||||||||||||
Sbjct: 2879 ggatcctgcaggaggtgaag 2898



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>gb|BC006188.1| Mus musculus kinesin family member 1C, mRNA (cDNA clone
           IMAGE:3601539)
          Length = 1129

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 ggatcctgcaggaggtgaag 144
           ||||||||||||||||||||
Sbjct: 840 ggatcctgcaggaggtgaag 859



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>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 127     atcctgcaggaggtgaagga 146
               ||||||||||||||||||||
Sbjct: 1415685 atcctgcaggaggtgaagga 1415666



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>emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chromosome 11 Contains the
             Gp1ba gene for glycoprotein 1b alpha polypeptide, the
             Slc25a11 gene for solute carrier family 25 (mitochondrial
             carrier; oxoglutarate carrier) member 11, the gene for a
             novel PA domain and C3HC4 type zinc finger (RING finger)
             containing protein, the Pfn1 gene for profilin 1, five
             novel genes, the Eno3 gene for muscle enolase 3 beta, the
             Spag7 gene for sperm associated antigen 7, the Kif1c gene
             for kinesin family member 1C, a ribosomal protein 37A
             (Rpl37a) pseudogene, the gene for a novel zinc finger
             protein and six CpG islands, complete sequence
          Length = 207086

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ggatcctgcaggaggtgaag 144
             ||||||||||||||||||||
Sbjct: 93763 ggatcctgcaggaggtgaag 93782



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>emb|AL590448.1|CNS07EGF chromosome VIII of strain GB-M1 of Encephalitozoon cuniculi
             (Microspora)
          Length = 238147

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   tcctgcaggaggtgaaggag 147
             ||||||||||||||||||||
Sbjct: 89825 tcctgcaggaggtgaaggag 89806



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>emb|CR933735.5| Mouse DNA sequence from clone DN-199E5 on chromosome 11, complete
             sequence
          Length = 188880

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ggatcctgcaggaggtgaag 144
             ||||||||||||||||||||
Sbjct: 57092 ggatcctgcaggaggtgaag 57111



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>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence
          Length = 168708

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 132   gcaggaggtgaaggagatgcagtc 155
             ||||||||||||||||| ||||||
Sbjct: 48141 gcaggaggtgaaggagaagcagtc 48118



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>gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, complete sequence
          Length = 114005

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 132   gcaggaggtgaaggagatgcagtc 155
             ||||||||||||||||| ||||||
Sbjct: 75064 gcaggaggtgaaggagaagcagtc 75087



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>dbj|AK046574.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
            enriched library, clone:B430105J22 product:KINESIN
            SUPERFAMILY PROTEIN 1C homolog [Mus musculus], full
            insert sequence
          Length = 4422

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  ggatcctgcaggaggtgaag 144
            ||||||||||||||||||||
Sbjct: 2133 ggatcctgcaggaggtgaag 2152



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>ref|NM_153103.1| Mus musculus kinesin family member 1C (Kif1c), mRNA
          Length = 3303

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  ggatcctgcaggaggtgaag 144
            ||||||||||||||||||||
Sbjct: 2522 ggatcctgcaggaggtgaag 2541



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>gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromosome 7, complete sequence
          Length = 222089

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    tcctgcaggaggtgaaggag 147
              ||||||||||||||||||||
Sbjct: 213434 tcctgcaggaggtgaaggag 213415



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>dbj|AK173007.1| Mus musculus mRNA for mKIAA0706 protein
          Length = 4962

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  ggatcctgcaggaggtgaag 144
            ||||||||||||||||||||
Sbjct: 2635 ggatcctgcaggaggtgaag 2654



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>gb|AC170740.3| Sorex araneus clone SA_Ba-535D8, complete sequence
          Length = 121913

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   aggaggtgaaggagatgcag 153
             ||||||||||||||||||||
Sbjct: 24404 aggaggtgaaggagatgcag 24423



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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 111    cccggcggtgaagcggatcctgca 134
              |||||||||| |||||||||||||
Sbjct: 918578 cccggcggtggagcggatcctgca 918601



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>dbj|AB074017.1| Mus musculus kif1C mRNA for kinesin superfamily protein 1C, complete
            cds
          Length = 3303

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  ggatcctgcaggaggtgaag 144
            ||||||||||||||||||||
Sbjct: 2522 ggatcctgcaggaggtgaag 2541


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,929,636
Number of Sequences: 3902068
Number of extensions: 1929636
Number of successful extensions: 39202
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39067
Number of HSP's gapped (non-prelim): 135
length of query: 290
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 268
effective length of database: 17,147,199,772
effective search space: 4595449538896
effective search space used: 4595449538896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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