>YSP4_CAEEL (Q10912) Hypothetical protein B0034.4|
          Length = 216

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = -1

Query: 289 PARKREAEFVPA*DRSEQREAKHEDLVSEEVVDWL----LHIPARKGKTMINKTYTKRP 125
           P  K+E + V    ++E+  A+   LVSE + D      +H P RKG    N+  T++P
Sbjct: 80  PTPKKEKKVVATTKKTERSVAQGPPLVSEHIKDEKKMPSVHKPIRKGSIYANELLTEKP 138

>COFE_NOCFA (Q5YQS0) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)|
          Length = 452

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = -1

Query: 280 KREAEFVPA*DRSEQREAKHEDLVSEEVVDWLLHIPARKGKTMINK 143
           K E   VPA    E+R+A    LV +E V     + ARKG+T+I +
Sbjct: 59  KAEGRVVPAPVDPEERDAVRRALVEQEAV----RVLARKGRTLITE 100

>COFE_MYCPA (Q73UJ3) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)|
          Length = 449

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -1

Query: 280 KREAEFVPA*DRSEQREAKHEDLVSEEVVDWLLHIPARKGKTMINK 143
           K E   VPA    E+R+     LV EE V     + ARKG+T+I +
Sbjct: 56  KCEGRLVPAPADPEERDRLRRKLVDEEAV----RVLARKGRTLITE 97

>MRC1_HUMAN (P22897) Macrophage mannose receptor 1 precursor (MMR) (CD206|
           antigen)
          Length = 1456

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = -2

Query: 282 ASVRQSLCQRRIGQSKGKQSTKTWFLRRSWI----GFFTSQHEKEKQ*SI 145
           AS R SLC +    +KGK   KTWF  R +     G   S + KE+Q +I
Sbjct: 652 ASSRTSLCFKLY--AKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTI 699

>LAMC3_MOUSE (Q9R0B6) Laminin gamma-3 chain precursor (Laminin 12 gamma 3|
           subunit)
          Length = 1581

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
 Frame = -3

Query: 119 CELSIVGCRMHIHMGGPTRW----MCPWRYSFQFCEF 21
           CE+ +        +  P  W    +CP  Y+ QFCEF
Sbjct: 662 CEVQLTSAWPQRELAPPASWVETCLCPQGYTGQFCEF 698

>TOLB_ANAMM (Q5PBH8) Protein tolB precursor|
          Length = 441

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 258 QRRIGQSKGKQSTKTWFLRRSWIGF 184
           QRRI   KG  S   W  R  WI F
Sbjct: 328 QRRISSGKGGYSAPAWSPRGDWIAF 352

>ACVR1_RAT (P80201) Activin receptor type-1 precursor (EC 2.7.11.30) (Activin|
           receptor type I) (ACTR-I) (Serine/threonine-protein
           kinase receptor R1) (SKR1) (TGF-B superfamily receptor
           type I) (TSR-I)
          Length = 509

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 181 EEANPRPPQKPSLRALLPFALTDPTLAQTLPHAC 282
           E  NPR  +  ++  L+   + D TLA+ L H+C
Sbjct: 155 ERLNPRDVEYGTIEGLITTNVGDSTLAELLDHSC 188

>ACVR1_MOUSE (P37172) Activin receptor type-1 precursor (EC 2.7.11.30) (Activin|
           receptor type I) (ACTR-I) (Serine/threonine-protein
           kinase receptor R1) (SKR1) (TGF-B superfamily receptor
           type I) (TSR-I) (TSK-7L)
          Length = 509

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 181 EEANPRPPQKPSLRALLPFALTDPTLAQTLPHAC 282
           E  NPR  +  ++  L+   + D TLA+ L H+C
Sbjct: 155 ERLNPRDVEYGTIEGLITTNVGDSTLAELLDHSC 188

>COFE_MYCTU (P96867) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)|
          Length = 448

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 280 KREAEFVPA*DRSEQREAKHEDLVSEEVVDWLLHIPARKGKTMINK 143
           K E   VPA +  EQR+     L+ +E V     + ARK +T+I +
Sbjct: 55  KCEGRLVPAPEDPEQRDRLRRKLIEDEAV----RVLARKDRTLITE 96

>COFE_MYCBO (Q7TWV3) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)|
          Length = 448

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 280 KREAEFVPA*DRSEQREAKHEDLVSEEVVDWLLHIPARKGKTMINK 143
           K E   VPA +  EQR+     L+ +E V     + ARK +T+I +
Sbjct: 55  KCEGRLVPAPEDPEQRDRLRRKLIEDEAV----RVLARKDRTLITE 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,741,459
Number of Sequences: 219361
Number of extensions: 814997
Number of successful extensions: 2215
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2214
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)