>STRA_STRGR (P08077) Streptomycin 6-kinase (EC 2.7.1.72) (Streptidine kinase)|
           (Streptomycin 6-phosphotransferase) (APH(6))
          Length = 307

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = -2

Query: 268 LPLLVLQTRCLTRW---RRGGTRAGEHCCIPAILCSTSSQRPIHLYDPPPQTP*SATESP 98
           LP LV   RC+ RW   R GG R+GE   +  +L +  ++  + L  P  +T  +     
Sbjct: 32  LPALV--ARCVDRWELKRDGGVRSGEASLVVPVLRADGTRAALKLQMPREETTAALIGLR 89

Query: 97  AWRRQG 80
           AW   G
Sbjct: 90  AWGGDG 95

>ADCY6_HUMAN (O43306) Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase|
           type VI) (ATP pyrophosphate-lyase 6) (Ca(2+)-inhibitable
           adenylyl cyclase)
          Length = 1168

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = -2

Query: 232 RWRRGGTRAGEHCCIPAILCSTSSQRPIHLYDPPPQTP*SATESPAWRRQGGP 74
           R RR GTRAG  C    + C   ++ P      PP+ P    +  A+ R+GGP
Sbjct: 27  RSRRRGTRAGGFCTPRYMSCLRDAEPPSPTPAGPPRCP---WQDDAFIRRGGP 76

>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB|
          Length = 142

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +2

Query: 185 RDAAVFXXXXXXXXPTRQAPCLKNKKWKRAGCGRWRRGCSAWRSRAPTRRRC 340
           R AA          P R +    +++ + +GC R  R CS WRS  P   RC
Sbjct: 71  RKAAPCSRKASTGSPARSSG--SSRRSRSSGCSRSSRSCSCWRS--PCGSRC 118

>CND1_SCHPO (O94679) Condensin complex subunit 1 (p128) (XCAP-D2 homolog)|
          Length = 1158

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = -3

Query: 207 QENTAASLQSCAQHPPSVRSTCMILLHKHLDRPPNHRLGGAKEDRS 70
           +E    ++ + A+HP  + +  ++LL K L +P NH    + +D +
Sbjct: 765 EEQAIEAIYAVAKHPDELCTNIILLLTKQLFKPSNHENTTSNDDHA 810

>IFI4_MOUSE (P15092) Interferon-activable protein 204 (Ifi-204)|
           (Interferon-inducible protein p204)
          Length = 640

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
 Frame = -1

Query: 320 PCCATQNSPVASDRILLSSTSCSSDKVPDALATR-----RNTSRRTLLHPCNLVLNILPA 156
           PCC    +   S   +L S+S +S  +P A   +     +N  R  +LH   L + +L A
Sbjct: 200 PCCEEPTAMCQSP--ILHSSSSASSNIPSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTA 257

Query: 155 SDP 147
           +DP
Sbjct: 258 TDP 260

>BGAL_PSEHA (P81650) Beta-galactosidase (EC 3.2.1.23) (Lactase)|
           (Beta-D-galactoside galactohydrolase)
          Length = 1038

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 260 KWKRAGCGRWRRGCSA 307
           +W RAG G+W+R CS+
Sbjct: 820 RWSRAGIGQWQRTCSS 835

>RT12_PROWI (P46744) Mitochondrial ribosomal protein S12|
          Length = 125

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 230 TRQAPCLKNKKWKRAGCGRWRRGCSAWRSRAPTR 331
           +RQAP LK+KK   AGC + R  C    +R P +
Sbjct: 13  SRQAPKLKSKKPALAGCPQKRGVCFRVYTRTPKK 46

>IL4_MERUN (P47966) Interleukin-4 precursor (IL-4) (B-cell stimulatory factor|
           1) (BSF-1) (Lymphocyte stimulatory factor 1)
          Length = 143

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 284 DRILLSSTSCSSDKVPDALATRRNTSRRTLLHPCNLVL 171
           D++L   T C+   VPD L   +NT+ + LL     VL
Sbjct: 39  DQVLKKETPCTEMFVPDVLIATKNTTEKGLLCRATRVL 76

>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = -2

Query: 214 TRAGEHCCIPAILCSTSSQRPIHLYDPPPQTP*SATESPAWRRQGGPIPVCSSLFLGLGG 35
           T  G H    A L +  +   I    P PQ+    T++P+  RQ GP+P   S  L L  
Sbjct: 110 TGPGTHQLSSARLPNHDTNVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHN 169

Query: 34  RR 29
           R+
Sbjct: 170 RQ 171

>IPPD_HUMAN (Q9UD71) Dopamine- and cAMP-regulated neuronal phosphoprotein|
           (DARPP-32)
          Length = 204

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
 Frame = -3

Query: 225 DEEEHEQENTAASLQSCAQHPPSVRSTCMILLHKHLDRPP----NHRLGGAKE 79
           DEEE E+E++ A +    +     ++TC   L    +RPP    + R GG+++
Sbjct: 128 DEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDGGSED 180

>IFI5_MOUSE (Q08619) Interferon-activable protein 205 (IFI-205) (D3 protein)|
          Length = 425

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = -1

Query: 320 PCCATQNSPVASDRILLSSTSCSSD----KVPDALATRRNTSRRTLLHPCNLVLNILPAS 153
           PCC  + + +    IL SS+S SS+    K   +    +N  R  +LH   L + +L A+
Sbjct: 179 PCCE-EPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTAT 237

Query: 152 DP 147
           DP
Sbjct: 238 DP 239

>DNB2_ADE40 (P11806) Early E2A DNA-binding protein|
          Length = 473

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 248 LKNKKWKRAGCGRWRRGCS 304
           +KN +W+  GC  W  GC+
Sbjct: 204 VKNNEWEPTGCAIWLHGCT 222

>ENV_MLVHO (P21436) Env polyprotein precursor [Contains: Coat protein GP76;|
           Spike protein p15E]
          Length = 666

 Score = 23.5 bits (49), Expect(2) = 9.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 274 CSLPLLVLQTRCLTRWRR 221
           C+ PL  L  RC T W R
Sbjct: 116 CNGPLTYLTPRCSTAWNR 133



 Score = 22.3 bits (46), Expect(2) = 9.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 320 PCCATQNSPVASDR 279
           PCC T N+P    R
Sbjct: 101 PCCTTDNNPPGCSR 114

>SALL3_MOUSE (Q62255) Sal-like protein 3 (Spalt-like protein 3) (MSal)|
           (Fragment)
          Length = 1323

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
 Frame = -1

Query: 326 SAPCCATQNSPVASDRILLSSTSCSSDKVPDALATR----------RNTSRRTLLHPCNL 177
           S PCC+T  +P  S     +  +CS+   P A+A            +N S    L P  L
Sbjct: 274 STPCCSTSAAPPDSG----AHPACSTGPAPGAVAAASSTVGNAVQPQNASTPPALGPGPL 329

Query: 176 VLNILPASDPLV*SSSTNTLI 114
           + +     +PL+  +S++++I
Sbjct: 330 LSSASNLPNPLLPQTSSSSVI 350

>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor|
           (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth
           factor-like domains 2) (Epidermal growth factor-like 1)
          Length = 3312

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 106 ESPAWRRQGGP-IPVCSSLFLGLGGRRELWRAPREP 2
           ES   R  GGP + V   +F+GL GRR+  R  R P
Sbjct: 66  ESSGVREDGGPGLGVREPIFVGLRGRRQSARNSRGP 101

>PHF1_MOUSE (Q9Z1B8) PHD finger protein 1 (PHF1 protein) (T-complex|
           testis-expressed 3) (Polycomblike 1) (mPCl1)
          Length = 559

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 8/43 (18%)
 Frame = -2

Query: 139 DPPPQTP*SATES--------PAWRRQGGPIPVCSSLFLGLGG 35
           D P  +P S T S        P + R   P P+C SL  G GG
Sbjct: 477 DTPKSSPHSVTASSSSVPALTPGFSRHSPPSPLCRSLSPGTGG 519

>ACBD4_HUMAN (Q8NC06) Acyl-CoA-binding domain-containing protein 4|
          Length = 268

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 269 RAGCGRWRRGCSAWRS 316
           R  C R RRGC AWR+
Sbjct: 238 RRACRRCRRGCRAWRA 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.127    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,184,093
Number of Sequences: 219361
Number of extensions: 931035
Number of successful extensions: 2207
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2206
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)