ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet58d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507402.1| PREDICTED Oryza sativa (japonica cultivar-group... 78 2e-11
2ref|XM_479242.1| Oryza sativa (japonica cultivar-group), mRNA 78 2e-11
3ref|XM_507401.1| PREDICTED Oryza sativa (japonica cultivar-group... 78 2e-11
4ref|XM_507400.1| PREDICTED Oryza sativa (japonica cultivar-group... 78 2e-11
5ref|XM_507399.1| PREDICTED Oryza sativa (japonica cultivar-group... 78 2e-11
6ref|XM_506492.2| PREDICTED Oryza sativa (japonica cultivar-group... 78 2e-11
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
8dbj|AK109428.2| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
9dbj|AK104543.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
10dbj|AK104126.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
11dbj|AK071223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
12dbj|AK068234.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
13dbj|AK061455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
14dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
15ref|XM_463512.1| Oryza sativa (japonica cultivar-group), predic... 44 0.29
16emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chr... 44 0.29
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
18dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
19dbj|AK103554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
20gb|AC005873.3|AC005873 citb_15_o_21, complete sequence 44 0.29
21dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
22ref|XM_470697.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.1
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.1
24ref|XM_745903.1| Aspergillus fumigatus Af293 ATP-dependent RNA h... 42 1.1
25gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genom... 42 1.1
26emb|AL807577.1|AFA12H2 Aspergillus fumigatus BAC AFA12F2 42 1.1
27gb|AC016355.8| Homo sapiens chromosome 15, clone RP11-502I4, com... 42 1.1
28dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
30dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
31gb|AC108034.2| Homo sapiens BAC clone RP11-137J16 from 4, comple... 42 1.1
32dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
33dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.1
34dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
35dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
36dbj|AK120709.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
37dbj|AK110542.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
38dbj|AK071803.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
39emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.1
40gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 4.5
41gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
42ref|XM_755379.1| Ustilago maydis 521 hypothetical protein (UM043... 40 4.5
43ref|XM_388146.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 4.5
44ref|XM_569437.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 4.5
45gb|AC122162.32| Medicago truncatula clone mth2-16g15, complete s... 40 4.5
46emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.5
47emb|BX640433.1| Bordetella parapertussis strain 12822, complete ... 40 4.5
48emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 40 4.5
49emb|BX005459.6| Zebrafish DNA sequence from clone CH211-214N22 i... 40 4.5
50gb|AC108877.2| Drosophila melanogaster 3L BAC RP98-17L24 (Roswel... 40 4.5
51ref|NM_139680.1| Drosophila melanogaster CG17150-RA, transcript ... 40 4.5
52dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
53gb|AC139618.3| Homo sapiens 3 BAC RP11-320G10 (Roswell Park Canc... 40 4.5
54dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.5
55dbj|AK110003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
56dbj|AK073800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
57emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 4.5
58gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16... 40 4.5
59gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 4.5
60gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.5
61gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
62emb|CT025584.18| Mouse DNA sequence from clone RP23-78N7 on chro... 40 4.5
63dbj|D55708.1| Oryza sativa (japonica cultivar-group) mRNA for ch... 40 4.5 
>ref|XM_507402.1| PREDICTED Oryza sativa (japonica cultivar-group), P0519E12.126 mRNA
          Length = 1197

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 511 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 570

              
Query: 339 gca 341
           |||
Sbjct: 571 gca 573
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>ref|XM_479242.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1077

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 360 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 419

              
Query: 339 gca 341
           |||
Sbjct: 420 gca 422
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>ref|XM_507401.1| PREDICTED Oryza sativa (japonica cultivar-group), P0519E12.126 mRNA
          Length = 1221

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 504 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 563

              
Query: 339 gca 341
           |||
Sbjct: 564 gca 566
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>ref|XM_507400.1| PREDICTED Oryza sativa (japonica cultivar-group), P0519E12.126 mRNA
          Length = 1221

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 504 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 563

              
Query: 339 gca 341
           |||
Sbjct: 564 gca 566
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>ref|XM_507399.1| PREDICTED Oryza sativa (japonica cultivar-group), P0519E12.126 mRNA
          Length = 1257

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 540 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 599

              
Query: 339 gca 341
           |||
Sbjct: 600 gca 602
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>ref|XM_506492.2| PREDICTED Oryza sativa (japonica cultivar-group), P0519E12.126 mRNA
          Length = 1182

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 463 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 522

              
Query: 339 gca 341
           |||
Sbjct: 523 gca 525
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                            
Query: 279      gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
                ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 26207571 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 26207512

                   
Query: 339      gca 341
                |||
Sbjct: 26207511 gca 26207509
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>dbj|AK109428.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E07, full
           insert sequence
          Length = 1175

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 458 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 517

              
Query: 339 gca 341
           |||
Sbjct: 518 gca 520
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>dbj|AK104543.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B05, full
           insert sequence
          Length = 1221

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 504 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 563

              
Query: 339 gca 341
           |||
Sbjct: 564 gca 566
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>dbj|AK104126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D10, full
           insert sequence
          Length = 1221

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 504 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 563

              
Query: 339 gca 341
           |||
Sbjct: 564 gca 566
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>dbj|AK071223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085L24, full
           insert sequence
          Length = 1258

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 541 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 600

              
Query: 339 gca 341
           |||
Sbjct: 601 gca 603
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>dbj|AK068234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149L16, full
           insert sequence
          Length = 1198

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 512 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 571

              
Query: 339 gca 341
           |||
Sbjct: 572 gca 574
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>dbj|AK061455.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H02, full
           insert sequence
          Length = 1077

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 279 gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
           ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 360 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 419

              
Query: 339 gca 341
           |||
Sbjct: 420 gca 422
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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E12
          Length = 152448

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                         
Query: 279   gcggtcgctggcgacggggctgttctgcgtggcgcagcagggcgccgacccgacggcgct 338
             ||||||||||||||||||| ||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 99429 gcggtcgctggcgacggggatgttctgcgtggcgctgccgaacgcggacccgacggcgct 99370

                
Query: 339   gca 341
             |||
Sbjct: 99369 gca 99367
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>ref|XM_463512.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1803

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 202 ctcctgctcgtgttcctcctcgtcgc 227
           ||||||||||| ||||||||||||||
Sbjct: 315 ctcctgctcgtcttcctcctcgtcgc 340
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>emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chromosome 10 Contains part
              of a novel gene (KIAA0534), complete sequence
          Length = 193980

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 250    gaagaacaagaagtggaagaga 271
              ||||||||||||||||||||||
Sbjct: 126548 gaagaacaagaagtggaagaga 126569
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 202      ctcctgctcgtgttcctcctcgtcgc 227
                ||||||||||| ||||||||||||||
Sbjct: 37956445 ctcctgctcgtcttcctcctcgtcgc 37956470
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>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698A10
          Length = 137348

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 202   ctcctgctcgtgttcctcctcgtcgc 227
             ||||||||||| ||||||||||||||
Sbjct: 37389 ctcctgctcgtcttcctcctcgtcgc 37414
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>dbj|AK103554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132G05, full
           insert sequence
          Length = 2348

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 202 ctcctgctcgtgttcctcctcgtcgc 227
           ||||||||||| ||||||||||||||
Sbjct: 624 ctcctgctcgtcttcctcctcgtcgc 649
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>gb|AC005873.3|AC005873 citb_15_o_21, complete sequence
          Length = 195653

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 250    gaagaacaagaagtggaagaga 271
              ||||||||||||||||||||||
Sbjct: 188447 gaagaacaagaagtggaagaga 188426
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>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0648C09
          Length = 107522

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 202   ctcctgctcgtgttcctcctcgtcgc 227
             ||||||||||| ||||||||||||||
Sbjct: 52721 ctcctgctcgtcttcctcctcgtcgc 52746
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>ref|XM_470697.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 293 cggggctgttctgcgtggcgcagcagggcgccgacccgacggcgctgca 341
           ||||| ||||||||||||||| ||||  ||| ||| || ||||||||||
Sbjct: 788 cggggatgttctgcgtggcgctgcagaacgcggacgcggcggcgctgca 836
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 293      cggggctgttctgcgtggcgcagcagggcgccgacccgacggcgctgca 341
                ||||| ||||||||||||||| ||||  ||| ||| || ||||||||||
Sbjct: 14604589 cggggatgttctgcgtggcgctgcagaacgcggacgcggcggcgctgca 14604637
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>ref|XM_745903.1| Aspergillus fumigatus Af293 ATP-dependent RNA helicase Dbp10
            (Afu6g11120) partial mRNA
          Length = 2610

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 249  tgaagaacaagaagtggaagagagc 273
            |||||||||||||| ||||||||||
Sbjct: 995  tgaagaacaagaagaggaagagagc 1019
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>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete
             sequence
          Length = 147130

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 293   cggggctgttctgcgtggcgcagcagggcgccgacccgacggcgctgca 341
             ||||| ||||||||||||||| ||||  ||| ||| || ||||||||||
Sbjct: 53122 cggggatgttctgcgtggcgctgcagaacgcggacgcggcggcgctgca 53074
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>emb|AL807577.1|AFA12H2 Aspergillus fumigatus BAC AFA12F2
          Length = 79718

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 249   tgaagaacaagaagtggaagagagc 273
             |||||||||||||| ||||||||||
Sbjct: 31340 tgaagaacaagaagaggaagagagc 31316
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>gb|AC016355.8| Homo sapiens chromosome 15, clone RP11-502I4, complete sequence
          Length = 186428

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     aggcgcccgccacagctcccg 31
              |||||||||||||||||||||
Sbjct: 145306 aggcgcccgccacagctcccg 145286
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 274      aggatgcggtcgctggcgacg 294
                |||||||||||||||||||||
Sbjct: 22308334 aggatgcggtcgctggcgacg 22308314
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 293      cggggctgttctgcgtggcgcagcagggcgccgacccgacggcgctgca 341
                ||||| ||||||||||||||| ||||  ||| ||| || ||||||||||
Sbjct: 14599564 cggggatgttctgcgtggcgctgcagaacgcggacgcggcggcgctgca 14599612
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 250     gaagaacaagaagtggaagag 270
               |||||||||||||||||||||
Sbjct: 8257936 gaagaacaagaagtggaagag 8257956
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>gb|AC108034.2| Homo sapiens BAC clone RP11-137J16 from 4, complete sequence
          Length = 164396

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 255    acaagaagtggaagagagcag 275
              |||||||||||||||||||||
Sbjct: 159830 acaagaagtggaagagagcag 159850
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>dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0566A10
          Length = 174367

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   aggatgcggtcgctggcgacg 294
             |||||||||||||||||||||
Sbjct: 86757 aggatgcggtcgctggcgacg 86737
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 307     gtggcgcagcagggcgccgac 327
               |||||||||||||||||||||
Sbjct: 2876876 gtggcgcagcagggcgccgac 2876896
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>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1134_F06
          Length = 130968

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 250   gaagaacaagaagtggaagag 270
             |||||||||||||||||||||
Sbjct: 90082 gaagaacaagaagtggaagag 90102
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>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0090H18
          Length = 174842

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 250   gaagaacaagaagtggaagag 270
             |||||||||||||||||||||
Sbjct: 34607 gaagaacaagaagtggaagag 34627
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>dbj|AK120709.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F15, full
            insert sequence
          Length = 1976

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 293  cggggctgttctgcgtggcgcagcagggcgccgacccgacggcgctgca 341
            ||||| ||||||||||||||| ||||  ||| ||| || ||||||||||
Sbjct: 1044 cggggatgttctgcgtggcgctgcagaacgcggacgcggcggcgctgca 1092
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>dbj|AK110542.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B04, full
           insert sequence
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 293 cggggctgttctgcgtggcgcagcagggcgccgacccgacggcgctgca 341
           ||||| ||||||||||||||| ||||  ||| ||| || ||||||||||
Sbjct: 643 cggggatgttctgcgtggcgctgcagaacgcggacgcggcggcgctgca 691
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>dbj|AK071803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111M02, full
            insert sequence
          Length = 2047

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 274  aggatgcggtcgctggcgacg 294
            |||||||||||||||||||||
Sbjct: 1627 aggatgcggtcgctggcgacg 1647
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 303     ctgcgtggcgcagcagggcgc 323
               |||||||||||||||||||||
Sbjct: 1949275 ctgcgtggcgcagcagggcgc 1949295
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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
              sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    caagaagtggaagagagcag 275
              ||||||||||||||||||||
Sbjct: 343472 caagaagtggaagagagcag 343491
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0022E16 map C481S, complete sequence
          Length = 179668

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   cgctggcgacggggctgttc 303
             ||||||||||||||||||||
Sbjct: 61256 cgctggcgacggggctgttc 61275
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>ref|XM_755379.1| Ustilago maydis 521 hypothetical protein (UM04325.1) partial mRNA
          Length = 3354

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 271  agcaggatgcggtcgctggcgacg 294
            |||||||||||||||||| |||||
Sbjct: 3020 agcaggatgcggtcgctgccgacg 3043
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>ref|XM_388146.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07970.1)
           partial mRNA
          Length = 1266

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 cagggatgcagcagtgttct 203
           ||||||||||||||||||||
Sbjct: 648 cagggatgcagcagtgttct 629
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>ref|XM_569437.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNC01240) partial mRNA
          Length = 2006

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 caagaagtggaagagagcag 275
           ||||||||||||||||||||
Sbjct: 331 caagaagtggaagagagcag 350
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>gb|AC122162.32| Medicago truncatula clone mth2-16g15, complete sequence
          Length = 108296

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 249   tgaagaacaagaagtggaagagag 272
             ||||||| ||||||||||||||||
Sbjct: 70605 tgaagaagaagaagtggaagagag 70628
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>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    tggcgcagcagggcgccgac 327
              ||||||||||||||||||||
Sbjct: 302439 tggcgcagcagggcgccgac 302420
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>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    tggcgcagcagggcgccgac 327
              ||||||||||||||||||||
Sbjct: 240185 tggcgcagcagggcgccgac 240166
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    tggcgcagcagggcgccgac 327
              ||||||||||||||||||||
Sbjct: 163850 tggcgcagcagggcgccgac 163831
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>emb|BX005459.6| Zebrafish DNA sequence from clone CH211-214N22 in linkage group 6,
             complete sequence
          Length = 211210

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   agaacaagaagtggaagaga 271
             ||||||||||||||||||||
Sbjct: 34628 agaacaagaagtggaagaga 34647
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>gb|AC108877.2| Drosophila melanogaster 3L BAC RP98-17L24 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163709

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ggtcctccttggcgccgcca 94
              ||||||||||||||||||||
Sbjct: 110301 ggtcctccttggcgccgcca 110282
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>ref|NM_139680.1| Drosophila melanogaster CG17150-RA, transcript variant A (CG17150),
             mRNA
          Length = 13173

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ggtcctccttggcgccgcca 94
             ||||||||||||||||||||
Sbjct: 12310 ggtcctccttggcgccgcca 12291
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 284      cgctggcgacggggctgttc 303
                ||||||||||||||||||||
Sbjct: 28101989 cgctggcgacggggctgttc 28102008
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>gb|AC139618.3| Homo sapiens 3 BAC RP11-320G10 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 140884

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  tgtctgaagaacaagaagtg 264
            ||||||||||||||||||||
Sbjct: 8241 tgtctgaagaacaagaagtg 8222
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     tcgccaacgcgtcaggcacc 243
               ||||||||||||||||||||
Sbjct: 4112062 tcgccaacgcgtcaggcacc 4112043
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>dbj|AK110003.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-F11, full
            insert sequence
          Length = 4674

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 268  gagagcaggatgcggtcgctggcg 291
            |||||| |||||||||||||||||
Sbjct: 4093 gagagccggatgcggtcgctggcg 4116
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>dbj|AK073800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D20, full
           insert sequence
          Length = 1106

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 cgctggcgacggggctgttc 303
           ||||||||||||||||||||
Sbjct: 665 cgctggcgacggggctgttc 684
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    ggcgcagcagggcgccgacc 328
              ||||||||||||||||||||
Sbjct: 907056 ggcgcagcagggcgccgacc 907075
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>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete
              sequence
          Length = 302417

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ggtcctccttggcgccgcca 94
              ||||||||||||||||||||
Sbjct: 267130 ggtcctccttggcgccgcca 267111
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    acaagaagtggaagagagca 274
              ||||||||||||||||||||
Sbjct: 305756 acaagaagtggaagagagca 305775
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 308     tggcgcagcagggcgccgac 327
               ||||||||||||||||||||
Sbjct: 3351759 tggcgcagcagggcgccgac 3351740
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 284      cgctggcgacggggctgttc 303
                ||||||||||||||||||||
Sbjct: 28086867 cgctggcgacggggctgttc 28086886
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>emb|CT025584.18| Mouse DNA sequence from clone RP23-78N7 on chromosome 16, complete
              sequence
          Length = 209542

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    tggaggaggatcatacaagt 147
              ||||||||||||||||||||
Sbjct: 156911 tggaggaggatcatacaagt 156930
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>dbj|D55708.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1049

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 cgctggcgacggggctgttc 303
           ||||||||||||||||||||
Sbjct: 607 cgctggcgacggggctgttc 626


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,500,614
Number of Sequences: 3902068
Number of extensions: 2500614
Number of successful extensions: 65319
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64750
Number of HSP's gapped (non-prelim): 569
length of query: 341
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 319
effective length of database: 17,147,199,772
effective search space: 5469956727268
effective search space used: 5469956727268
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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