| Clone Name | baet58d06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 632 bits (319), Expect = e-178 Identities = 322/323 (99%) Strand = Plus / Plus Query: 20 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 60 Query: 80 ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 120 Query: 140 aaggatttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctc 199 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctc 180 Query: 200 ctgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctc 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctc 240 Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 300 Query: 320 gcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||||| Sbjct: 301 gcctactacctgtcgtcgcaggg 323
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 262 bits (132), Expect = 7e-67 Identities = 241/274 (87%), Gaps = 5/274 (1%) Strand = Plus / Plus Query: 67 catggctcgcatgggggcgtcggtgctttcgatcctgctcgcctcttgcgccct---ggc 123 |||||||||||||| || ||||||||| |||||||||| || ||||| ||| | ||| Sbjct: 123 catggctcgcatggcggtgtcggtgctggcgatcctgctggcgtcttgtgccgttgcggc 182 Query: 124 ggcggcgagcttcgacaaggatttcgacgttacctggggtgacgggcgcggcaagatcct 183 ||||||||||||||||||||| |||||| | || ||||| ||||| || || |||||||| Sbjct: 183 ggcggcgagcttcgacaaggagttcgacatcacgtggggcgacggccgtggaaagatcct 242 Query: 184 caacaacggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtc 243 |||||| || ||||||||||| ||||| ||||||||| |||||| |||||||||||||| Sbjct: 243 caacaatgggcagctcctgaccctggggctggacaagacctccgggtccgggttccagtc 302 Query: 244 caagcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtc-cccggcaac- 301 ||||| |||||||||||||||||||||||||||||| |||||||||||| || |||||| Sbjct: 303 caagcgcgagtacctcttcggcaagatcgacatgcaactcaagctcgtcgccgggcaact 362 Query: 302 tctgccggcaccgtaaccgcctactacctgtcgt 335 || ||||||||||| ||||||||||||||||||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgt 396
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 210 bits (106), Expect = 2e-51 Identities = 181/206 (87%) Strand = Plus / Plus Query: 141 aggatttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 200 |||| |||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 196 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 255 Query: 201 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 260 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 256 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 315 Query: 261 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 320 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 316 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 375 Query: 321 cctactacctgtcgtcgcaggggccg 346 |||||||| ||||||||||||||||| Sbjct: 376 cctactacttgtcgtcgcaggggccg 401
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 210 bits (106), Expect = 2e-51 Identities = 181/206 (87%) Strand = Plus / Plus Query: 141 aggatttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 200 |||| |||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 186 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 245 Query: 201 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 260 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 246 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 305 Query: 261 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 320 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 306 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 Query: 321 cctactacctgtcgtcgcaggggccg 346 |||||||| ||||||||||||||||| Sbjct: 366 cctactacttgtcgtcgcaggggccg 391
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 182 bits (92), Expect = 5e-43 Identities = 164/188 (87%) Strand = Plus / Minus Query: 141 aggatttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 200 |||| |||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 28774036 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 28773977 Query: 201 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 260 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 28773976 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 28773917 Query: 261 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 320 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 28773916 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 28773857 Query: 321 cctactac 328 |||||||| Sbjct: 28773856 cctactac 28773849 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 28749713 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 28749772 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 28749773 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 141 bits (71), Expect = 2e-30 Identities = 139/159 (87%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 158 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 217 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 28761428 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 28761487 Query: 218 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 276 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 28761488 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 28761546 Query: 277 gcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||| |||||||||||||||||||||| ||||||||||| Sbjct: 28761547 gcagatcaagctcgtccccggcaactccgccggcaccgt 28761585 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 296 ggcaactctgccggcaccgtaaccgcctactac 328 |||||||| ||||||||||| ||| |||||||| Sbjct: 13230243 ggcaactcggccggcaccgtcaccacctactac 13230275
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 182 bits (92), Expect = 5e-43 Identities = 164/188 (87%) Strand = Plus / Minus Query: 141 aggatttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 200 |||| |||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 81811 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 81752 Query: 201 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 260 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 81751 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 81692 Query: 261 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 320 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 81691 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 81632 Query: 321 cctactac 328 |||||||| Sbjct: 81631 cctactac 81624 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 57488 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 57547 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 57548 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 141 bits (71), Expect = 2e-30 Identities = 139/159 (87%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 158 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 217 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 69203 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 69262 Query: 218 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 276 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 69263 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 69321 Query: 277 gcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||| |||||||||||||||||||||| ||||||||||| Sbjct: 69322 gcagatcaagctcgtccccggcaactccgccggcaccgt 69360
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 176 bits (89), Expect = 3e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 265 ctccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 324 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||| Sbjct: 325 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg 384 Query: 343 g 343 | Sbjct: 385 g 385
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 168 bits (85), Expect = 7e-39 Identities = 112/121 (92%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| | Sbjct: 159 ctccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagat 218 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||| Sbjct: 219 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg 278 Query: 343 g 343 | Sbjct: 279 g 279
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 167 bits (84), Expect = 3e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 167 bits (84), Expect = 3e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||||||||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 165 bits (83), Expect = 1e-37 Identities = 163/187 (87%), Gaps = 2/187 (1%) Strand = Plus / Plus Query: 158 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 217 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 194 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 253 Query: 218 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 276 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 254 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 312 Query: 277 gcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc 336 |||| |||||||||||||||||||||| ||||||||||| || ||| |||||||||||| Sbjct: 313 gcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacctgtcgtc 372 Query: 337 gcagggg 343 ||||||| Sbjct: 373 gcagggg 379
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 159 bits (80), Expect = 7e-36 Identities = 110/120 (91%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 153 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 212 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 |||| |||||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 213 caagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 272
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 149 bits (75), Expect = 7e-33 Identities = 108/119 (90%) Strand = Plus / Plus Query: 224 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 283 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 309 tccggctccgggttccagtcccggcacgagtacctgttcggcaagatcgacatgcagctg 368 Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||| || || |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 369 cggctggtgccgggcaactccgccggcaccgtcaccgcctactacctgtcgtcgcaggg 427
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 150279 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 150338 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 150339 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384 Score = 141 bits (71), Expect = 2e-30 Identities = 139/159 (87%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 158 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 217 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 161994 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 162053 Query: 218 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 276 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 162054 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 162112 Query: 277 gcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||| |||||||||||||||||||||| ||||||||||| Sbjct: 162113 gcagatcaagctcgtccccggcaactccgccggcaccgt 162151
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 155 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 214 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 204 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 263 Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 264 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 323 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 |||||||||||||||||||| || |||| ||||||||||| || ||| ||| || ||| Sbjct: 324 atgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcg 383 Query: 335 tcgcaggg 342 |||||||| Sbjct: 384 tcgcaggg 391
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 155 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 214 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 211 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 270 Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 271 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 330 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 |||||||||||||||||||| || |||| ||||||||||| || ||| ||| || ||| Sbjct: 331 atgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcg 390 Query: 335 tcgcaggg 342 |||||||| Sbjct: 391 tcgcaggg 398
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 129 bits (65), Expect = 6e-27 Identities = 137/161 (85%) Strand = Plus / Plus Query: 155 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 214 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 94 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 153 Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 154 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 213 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||||||||||||| || |||| ||||||||||| Sbjct: 214 atgcagctcaagctcgtcccgggggactccgccggcaccgt 254
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 119 bits (60), Expect = 6e-24 Identities = 105/120 (87%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 |||||||||||| |||||||||||| |||||||||||| ||||||| |||| |||||| | Sbjct: 322 ctccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagat 381 Query: 283 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 |||||| || ||||| ||||| ||||||||||| ||| ||| |||||| ||||| ||||| Sbjct: 382 caagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtcccaggg 441
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 117 bits (59), Expect = 2e-23 Identities = 113/131 (86%) Strand = Plus / Minus Query: 212 ctggacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatc 271 ||||||| || |||||| |||||||||||||||||| |||||||||| |||||||||||| Sbjct: 936 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 877 Query: 272 gacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 331 || |||||| | ||||| || || |||||||| || |||||||| || ||| |||||| Sbjct: 876 gagatgcagatgaagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctg 817 Query: 332 tcgtcgcaggg 342 ||||||||||| Sbjct: 816 tcgtcgcaggg 806
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 117 bits (59), Expect = 2e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 212 ctggacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatc 271 ||||||| || |||||| |||||||||||||||||| |||||||||| |||||||||||| Sbjct: 268 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 327 Query: 272 gacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 331 || |||||| | ||||| || || |||||||| || |||||||| || ||| |||||| Sbjct: 328 gagatgcagatgaagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctg 387 Query: 332 tcgtcgcaggg 342 ||||||||||| Sbjct: 388 tcgtcgcaggg 398
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 111 bits (56), Expect = 2e-21 Identities = 164/200 (82%) Strand = Plus / Plus Query: 131 agcttcgacaaggatttcgacgttacctggggtgacgggcgcggcaagatcctcaacaac 190 |||||| |||| ||||||||| | ||||||||||| || || || |||||||| |||||| Sbjct: 316 agcttcaacaacgatttcgacatcacctggggtgatggccgggggaagatcctaaacaac 375 Query: 191 ggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtccaagcac 250 ||||||||||| | || |||||||| ||||||||| ||||| || || || || Sbjct: 376 ggccagctcctcagcctctccctggacaaaacctccggctcagggtttcaatctaaaaac 435 Query: 251 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggc 310 |||||||||| ||||| ||||||||||| || |||||||||||||||||||| || || Sbjct: 436 cagtacctctttggcaacatcgacatgcaactgaagctcgtccccggcaactcggctgga 495 Query: 311 accgtaaccgcctactacct 330 || || |||||||| ||||| Sbjct: 496 acggtcaccgcctattacct 515
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 109 bits (55), Expect = 6e-21 Identities = 104/119 (87%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 224 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 283 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || Sbjct: 292 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 351 Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 342 ||||| || || |||||||| | ||||| || ||| ||| |||||||||||| ||||| Sbjct: 352 aagctggtgccaggcaactccg-tggcacggtcaccaccttctacctgtcgtcccaggg 409
>ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25820 (XTR9) mRNA, complete cds Length = 1089 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 335 tc 336 || Sbjct: 341 tc 342
>gb|AY093183.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 1068 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 335 tc 336 || Sbjct: 341 tc 342
>gb|AF093672.1|AF093672 Arabidopsis thaliana xyloglucan endotransglycosylase (XTR9) mRNA, complete cds Length = 1100 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 210 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 269 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 270 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 329 Query: 335 tc 336 || Sbjct: 330 tc 331
>gb|BT003385.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 901 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 169 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 228 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 334 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 229 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 288 Query: 335 tc 336 || Sbjct: 289 tc 290
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 18979 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 19038 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||| Sbjct: 19039 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 19092
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 215 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 274 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 27900 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 27959 Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||| Sbjct: 27960 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 28013
>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full insert sequence Length = 634 Score = 85.7 bits (43), Expect = 9e-14 Identities = 52/55 (94%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 277 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 251 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatg 305
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcag 340 ||||||||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||| Sbjct: 275 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcag 333
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcag 340 ||||||||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||| Sbjct: 272 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcag 330
>dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein 19-1-5, complete cds Length = 1221 Score = 73.8 bits (37), Expect = 3e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 227 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 286 ||||| || ||||| |||||| |||| ||||| || ||||| || |||||||| ||||| Sbjct: 266 ggctcgggtttccaatccaagaacgaatacctttttggcaaaattgacatgcaactcaaa 325 Query: 287 ctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 || ||||| ||||||||||| |||||||| || |||||||| Sbjct: 326 ctagtccctggcaactctgctggcaccgtcactgcctacta 366
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 210 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 269 Query: 283 caagctcgtccccggc 298 ||||||||||||||| Sbjct: 270 gaagctcgtccccggc 285
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 32995 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 32936 Query: 283 caagctcgtccccggc 298 ||||||||||||||| Sbjct: 32935 gaagctcgtccccggc 32920
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 30557287 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 30557228 Query: 283 caagctcgtccccggc 298 ||||||||||||||| Sbjct: 30557227 gaagctcgtccccggc 30557212 Score = 40.1 bits (20), Expect = 4.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 30508619 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 30508572
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 223 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 282 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 278 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 337 Query: 283 caagctcgtccccggc 298 ||||||||||||||| Sbjct: 338 gaagctcgtccccggc 353
>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2) mRNA, complete cds Length = 1375 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 218 aaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 277 |||| ||| ||||| || ||| |||| | ||||||||| || || || |||||||| ||| Sbjct: 207 aaggcctcgggctcgggcttcgagtctacgcacgagtatctatttggtaagatcgatatg 266 Query: 278 cagctcaagctcgtccccggcaactctgccggcaccgt 315 ||||||||||| ||||| || || |||||||||||||| Sbjct: 267 cagctcaagctggtccctggaaattctgccggcaccgt 304
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||| ||||| ||||||| || ||||| ||||||||||| || ||||||||| Sbjct: 311 atcgacatgcagatcaaggtcgtccctggtaactccgccggcaccgtcacagcctactac 370 Query: 329 ct 330 || Sbjct: 371 ct 372
>ref|NM_125136.3| Arabidopsis thaliana XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds AT5G57550 (XTR3) mRNA, complete cds Length = 1059 Score = 65.9 bits (33), Expect = 8e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 251 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 320 gcctactac 328 ||||||||| Sbjct: 311 gcctactac 319
>gb|AY143939.1| Arabidopsis thaliana At5g57550/MUA2_12 mRNA, complete cds Length = 855 Score = 65.9 bits (33), Expect = 8e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 214 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 273 Query: 320 gcctactac 328 ||||||||| Sbjct: 274 gcctactac 282
>gb|AY125495.1| Arabidopsis thaliana AT5g57550/MUA2_12 mRNA, complete cds Length = 1060 Score = 65.9 bits (33), Expect = 8e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 251 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 320 gcctactac 328 ||||||||| Sbjct: 311 gcctactac 319
>emb|BX833748.1|CNS0A0FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 65.9 bits (33), Expect = 8e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 228 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 287 Query: 320 gcctactac 328 ||||||||| Sbjct: 288 gcctactac 296
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 65.9 bits (33), Expect = 8e-08 Identities = 60/69 (86%) Strand = Plus / Minus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 37112 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 37053 Query: 320 gcctactac 328 ||||||||| Sbjct: 37052 gcctactac 37044
>gb|AF163823.1|AF163823 Arabidopsis thaliana endoxyloglucan transferase (XTR3) gene, complete cds Length = 2703 Score = 65.9 bits (33), Expect = 8e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 1331 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 1390 Query: 320 gcctactac 328 ||||||||| Sbjct: 1391 gcctactac 1399
>gb|U43485.1|ATU43485 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR3) mRNA, 3' end, partial cds Length = 1017 Score = 65.9 bits (33), Expect = 8e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 260 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 319 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 193 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 252 Query: 320 gcctactac 328 ||||||||| Sbjct: 253 gcctactac 261
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcag 340 ||||||||||| |||| |||| |||||||| || ||||||| |||||||||||||||| Sbjct: 324 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcag 382
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc 336 ||||||||||| |||| |||| ||||||||||| ||||||| |||||||||||| Sbjct: 285 tcaagctcgtcggcggcgactccgccggcaccgtcaccgccttctacctgtcgtc 339
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 56.0 bits (28), Expect = 8e-05 Identities = 88/108 (81%) Strand = Plus / Plus Query: 224 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 283 ||||||||||| ||| |||||||| | |||||||||||||| || || | | | | | Sbjct: 212 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 271 Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 331 ||||||||| ||||||||| ||||||||||| ||| ||| ||||||| Sbjct: 272 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 319
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 285 agctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 56.0 bits (28), Expect = 8e-05 Identities = 88/108 (81%) Strand = Plus / Plus Query: 224 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 283 ||||||||||| ||| |||||||| | |||||||||||||| || |||| | || | Sbjct: 221 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttcgaggtcaagatg 280 Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 331 ||||||||| ||||||||| |||||||| || ||| ||| ||||||| Sbjct: 281 aagctcgtcgacggcaactccgccggcacagtcacctccttctacctg 328
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 285 agctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 285 agctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 113311 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 113357
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 12930 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 12976
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 19010113 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19010159
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 282 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 19168762 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19168808
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 275 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtc 333 ||||||||||||||||| ||||||||||||| ||||| || || || |||||| |||| Sbjct: 261 atgcagctcaagctcgttgccggcaactctgctggcactgtcactgcttactacttgtc 319
>gb|BT020422.1| Arabidopsis thaliana At4g14130 mRNA, complete cds Length = 870 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 328 cctgtc 333 | |||| Sbjct: 276 cttgtc 281
>ref|NM_117490.2| Arabidopsis thaliana XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G14130 (XTR7) mRNA, complete cds Length = 1064 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 328 cctgtc 333 | |||| Sbjct: 361 cttgtc 366
>gb|AY045865.1| Arabidopsis thaliana putative xyloglucan endotransglycosylase-related protein XTR-7 (At4g14130) mRNA, complete cds Length = 1075 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 328 cctgtc 333 | |||| Sbjct: 361 cttgtc 366
>emb|BX841553.1|CNS09YH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 279 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 338 Query: 328 cctgtc 333 | |||| Sbjct: 339 cttgtc 344
>gb|AY087282.1| Arabidopsis thaliana clone 33554 mRNA, complete sequence Length = 1060 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 328 cctgtc 333 | |||| Sbjct: 361 cttgtc 366
>gb|U43489.1|ATU43489 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR7) mRNA, complete cds Length = 979 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 328 cctgtc 333 | |||| Sbjct: 276 cttgtc 281
>ref|NM_113277.1| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT3G23730 mRNA, complete cds Length = 1074 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 329 ctgtc 333 |||| Sbjct: 386 ttgtc 390
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 50.1 bits (25), Expect = 0.005 Identities = 91/113 (80%) Strand = Plus / Plus Query: 224 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 283 ||||||||||| ||| | |||||| || |||||||||||||| || || | | | | | Sbjct: 229 tccggctccggcttcaaatccaagaacaagtacctcttcggcgagttcagcgtccggatg 288 Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc 336 ||||||||| ||||||||| ||||||||||| ||| ||| ||| ||| |||| Sbjct: 289 aagctcgtcgacggcaactccgccggcaccgtcacctccttctatctgacgtc 341
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 50.1 bits (25), Expect = 0.005 Identities = 52/61 (85%) Strand = Plus / Minus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 95873 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 95814 Query: 328 c 328 | Sbjct: 95813 c 95813
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 50.1 bits (25), Expect = 0.005 Identities = 52/61 (85%) Strand = Plus / Minus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 327 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 35421 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 35362 Query: 328 c 328 | Sbjct: 35361 c 35361
>gb|AY084449.1| Arabidopsis thaliana clone 10852 mRNA, complete sequence Length = 1076 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 327 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 386 Query: 329 ctgtc 333 |||| Sbjct: 387 ttgtc 391
>dbj|AK175805.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A12 Length = 1084 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 329 ctgtc 333 |||| Sbjct: 386 ttgtc 390
>dbj|AK175804.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A11 Length = 1084 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 329 ctgtc 333 |||| Sbjct: 386 ttgtc 390
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcag 340 ||||||||| |||| |||| || |||||||| || |||| |||||||||||||||| Sbjct: 297 aagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctgtcgtcgcag 353
>gb|AE009201.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 227 of 256 of the complete sequence Length = 11399 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 126 cggcgagcttcgacaaggatttcg 149 |||||||||||||||||||||||| Sbjct: 4271 cggcgagcttcgacaaggatttcg 4294
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgt 315 |||||| ||||||||||||| ||||||||||| Sbjct: 328 aagctcatccccggcaactccgccggcaccgt 359
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 126 cggcgagcttcgacaaggatttcg 149 |||||||||||||||||||||||| Sbjct: 2519732 cggcgagcttcgacaaggatttcg 2519755
>gb|AF232237.1|AF232237 Agrobacterium tumefaciens SAICAR synthetase (purC) gene, partial cds; and TetR family bacterial regulatory protein (ameR), membrane fusion protein (ameA), multidrug efflux transporter RND family protein (ameB), and outer membrane protein (ameC) genes, complete cds Length = 7277 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 126 cggcgagcttcgacaaggatttcg 149 |||||||||||||||||||||||| Sbjct: 119 cggcgagcttcgacaaggatttcg 142
>dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYM9 Length = 71178 Score = 48.1 bits (24), Expect = 0.019 Identities = 51/60 (85%) Strand = Plus / Plus Query: 269 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 328 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 24457 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 24516
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgt 315 |||||| ||||||||||||| ||||||||||| Sbjct: 353 aagctcatccccggcaactccgccggcaccgt 384
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 330 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 330
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 330 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 335
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 300 actctgccggcaccgtaaccgcctactacctgtcgtcgcaggggccg 346 |||| ||||||||||| ||||| |||||| |||| ||||| |||||| Sbjct: 1 actccgccggcaccgtgaccgcttactacttgtcttcgcaagggccg 47
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 330 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 8321957 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 8322003
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 330 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 280 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 326
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 330 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 62066 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 62112
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 330 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 335
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 330 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 330
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Plus Query: 291 tccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcg 337 |||| |||||||| || |||||||| ||| ||| ||||||||||||| Sbjct: 374 tcccgggcaactccgcgggcaccgtgacctccttctacctgtcgtcg 420
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 44.1 bits (22), Expect = 0.29 Identities = 37/42 (88%) Strand = Plus / Plus Query: 295 cggcaactctgccggcaccgtaaccgcctactacctgtcgtc 336 ||||||||| ||||||||||| ||| ||| ||||||| |||| Sbjct: 307 cggcaactccgccggcaccgtcacctccttctacctgacgtc 348
>gb|DQ382358.1| Glycine max clone pSXET1a xyloglucan endotransglycosylase precursor (XET1) mRNA, partial cds Length = 681 Score = 44.1 bits (22), Expect = 0.29 Identities = 61/74 (82%) Strand = Plus / Plus Query: 251 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggc 310 |||||| | ||||| || || ||||||||||||||||| || || || |||||||| || Sbjct: 354 gagtacttgttcggaaaaattgacatgcagctcaagcttgtgcctggtaactctgctgga 413 Query: 311 accgtaaccgccta 324 || ||||| ||||| Sbjct: 414 acagtaactgccta 427
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 44.1 bits (22), Expect = 0.29 Identities = 37/42 (88%) Strand = Plus / Plus Query: 295 cggcaactctgccggcaccgtaaccgcctactacctgtcgtc 336 ||||||||| ||||||||||| ||| ||| ||||||| |||| Sbjct: 295 cggcaactccgccggcaccgtcacctccttctacctgacgtc 336
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 44.1 bits (22), Expect = 0.29 Identities = 37/42 (88%) Strand = Plus / Plus Query: 295 cggcaactctgccggcaccgtaaccgcctactacctgtcgtc 336 ||||||||| ||||||||||| ||| ||| ||||||| |||| Sbjct: 296 cggcaactccgccggcaccgtcacctccttctacctgacgtc 337
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 44.1 bits (22), Expect = 0.29 Identities = 37/42 (88%) Strand = Plus / Plus Query: 295 cggcaactctgccggcaccgtaaccgcctactacctgtcgtc 336 ||||||||| ||||||||||| ||| ||| ||||||| |||| Sbjct: 296 cggcaactccgccggcaccgtcacctccttctacctgacgtc 337
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 gctccgggttccagtccaagcacga 252 ||||||||||||||||| ||||||| Sbjct: 90144 gctccgggttccagtcccagcacga 90120
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 cggcaagatcgacatgcagctcaag 286 ||||||||||||||||||| ||||| Sbjct: 511026 cggcaagatcgacatgcagatcaag 511050
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 296 ggcaactctgccggcaccgtaaccgcctactac 328 |||||||| ||||||||||| ||| |||||||| Sbjct: 147431 ggcaactcggccggcaccgtcaccacctactac 147463
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 296 ggcaactctgccggcaccgtaaccgcctactac 328 |||||||| ||||||||||| ||| |||||||| Sbjct: 589 ggcaactcggccggcaccgtcaccacctactac 621
>ref|XM_479512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1304 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 232 ggctcgcatgggggcgtcgctgct 255
>ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1291 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 234 ggctcgcatgggggcgtcgctgct 257
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 40.1 bits (20), Expect = 4.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 228 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 275
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 578416 gcgcggcaagatcctcaaca 578435
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ggctccgggttccagtccaagcac 250 ||||||||||||||| |||||||| Sbjct: 108026 ggctccgggttccagcccaagcac 108003
>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence Length = 195587 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ggctccgggttccagtccaagcac 250 ||||||||||||||| |||||||| Sbjct: 17463 ggctccgggttccagcccaagcac 17440
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 1970047 gcgcggcaagatcctcaaca 1970028
>emb|X66125.1|OSPER O.sativa mRNA for peroxidase Length = 1287 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 183 ggctcgcatgggggcgtcgctgct 206
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 40.1 bits (20), Expect = 4.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 141996 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 141949
>emb|AJ421977.1|SMA421977 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm199 Length = 480 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421975.1|SMA421975 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm8 Length = 480 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421974.1|SMA421974 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm117 Length = 480 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421973.1|SMA421973 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm98 Length = 480 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 636185 gcgcggcaagatcctcaaca 636204
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 338395 gcgcggcaagatcctcaaca 338376
>gb|AE012271.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 179 of 460 of the complete genome Length = 10028 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 1720 gcgcggcaagatcctcaaca 1701
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 3067621 gcgcggcaagatcctcaaca 3067640
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 28620405 ggctcgcatgggggcgtcgctgct 28620428
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 86363 ggctcgcatgggggcgtcgctgct 86386
>dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F01, full insert sequence Length = 1287 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 40.1 bits (20), Expect = 4.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 323 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 276
>dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K12, full insert sequence Length = 1290 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 233 ggctcgcatgggggcgtcgctgct 256
>dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C17, full insert sequence Length = 1303 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 231 ggctcgcatgggggcgtcgctgct 254
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 5273940 gcgcggcaagatcctcaaca 5273921
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 40.1 bits (20), Expect = 4.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 268 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 315 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 291 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 338
>tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx111 gene for class III peroxidase 111 precursor, exons 1-4 Length = 1250 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 162 ggctcgcatgggggcgtcgctgct 185
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgcggcaagatcctcaaca 188 |||||||||||||||||||| Sbjct: 5587812 gcgcggcaagatcctcaaca 5587793
>gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, complete cds Length = 1306 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggctcgcatgggggcgtcggtgct 93 ||||||||||||||||||| |||| Sbjct: 205 ggctcgcatgggggcgtcgctgct 228
>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete sequence Length = 192913 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccatccagcattctcagacc 36 |||||||||||||||||||| Sbjct: 68495 ccatccagcattctcagacc 68514
>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence Length = 219361 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccatccagcattctcagacc 36 |||||||||||||||||||| Sbjct: 56171 ccatccagcattctcagacc 56190 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,076,220 Number of Sequences: 3902068 Number of extensions: 2076220 Number of successful extensions: 35019 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 34363 Number of HSP's gapped (non-prelim): 639 length of query: 346 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 324 effective length of database: 17,147,199,772 effective search space: 5555692726128 effective search space used: 5555692726128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)