| Clone Name | baet58c11 |
|---|---|
| Clone Library Name | barley_pub |
>RS4_PRUAR (O81363) 40S ribosomal protein S4| Length = 261 Score = 122 bits (307), Expect = 2e-28 Identities = 57/59 (96%), Positives = 58/59 (98%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYR Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
>RS4_GOSHI (P46299) 40S ribosomal protein S4| Length = 262 Score = 122 bits (306), Expect = 2e-28 Identities = 57/59 (96%), Positives = 58/59 (98%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYR Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
>RS4_MAIZE (O22424) 40S ribosomal protein S4| Length = 265 Score = 122 bits (305), Expect = 3e-28 Identities = 56/59 (94%), Positives = 58/59 (98%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLILI+RNRLKYALTYR Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYR 59
>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)| Length = 268 Score = 122 bits (305), Expect = 3e-28 Identities = 56/59 (94%), Positives = 58/59 (98%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLILI+RNRLKYALTYR Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYR 59
>RS4_ARATH (P49204) 40S ribosomal protein S4| Length = 262 Score = 121 bits (304), Expect = 4e-28 Identities = 55/59 (93%), Positives = 58/59 (98%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPL+LI+RNRLKYALTYR Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYR 59
>RS4_SOLTU (P46300) 40S ribosomal protein S4| Length = 264 Score = 120 bits (302), Expect = 7e-28 Identities = 54/59 (91%), Positives = 58/59 (98%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPL++I+RNRLKYALTYR Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYR 59
>RS4_DICDI (P51405) 40S ribosomal protein S4| Length = 266 Score = 102 bits (254), Expect = 3e-22 Identities = 47/56 (83%), Positives = 51/56 (91%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKRL AP+HWMLDKL G +AP+PSSGPHK RECLPLIL+LRNRLKYALT Sbjct: 1 ARGPKKHLKRLAAPNHWMLDKLSGKWAPRPSSGPHKLRECLPLILVLRNRLKYALT 56
>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4_XENLA (P49401) 40S ribosomal protein S4| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4_CRIGR (P47961) 40S ribosomal protein S4| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4_CHICK (P47836) 40S ribosomal protein S4| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant| mRNA protein) (SCR10) Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 56
>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 99.0 bits (245), Expect = 3e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALT 56
>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 99.0 bits (245), Expect = 3e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALT 56
>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 99.0 bits (245), Expect = 3e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALT 56
>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 99.0 bits (245), Expect = 3e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALT 56
>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 99.0 bits (245), Expect = 3e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALT 56
>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 99.0 bits (245), Expect = 3e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALT 56
>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 99.0 bits (245), Expect = 3e-21 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 ARG KKHLKR+ AP HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALT 56
>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C| Length = 262 Score = 98.6 bits (244), Expect = 4e-21 Identities = 45/59 (76%), Positives = 49/59 (83%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 M RG KKHLKR+ AP HW+LDKL G +APKPS GPHKARECLPLI+ LRNRLKYAL R Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGR 59
>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B| Length = 262 Score = 98.6 bits (244), Expect = 4e-21 Identities = 45/59 (76%), Positives = 49/59 (83%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 M RG KKHLKR+ AP HW+LDKL G +APKPS GPHKARECLPLI+ LRNRLKYAL R Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGR 59
>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A| Length = 262 Score = 98.6 bits (244), Expect = 4e-21 Identities = 45/59 (76%), Positives = 49/59 (83%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 M RG KKHLKR+ AP HW+LDKL G +APKPS GPHKARECLPLI+ LRNRLKYAL R Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGR 59
>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)| Length = 260 Score = 95.1 bits (235), Expect = 4e-20 Identities = 44/59 (74%), Positives = 49/59 (83%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 MARG KKHLKRL APSHWMLDKL G +AP+ S+GPHK RE LPL++ LRNRLKYAL R Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRSSAGPHKLRESLPLVIFLRNRLKYALNGR 59
>RS4_DROME (P41042) 40S ribosomal protein S4| Length = 261 Score = 95.1 bits (235), Expect = 4e-20 Identities = 44/56 (78%), Positives = 48/56 (85%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYAL 274 MARG KKHLKRL AP WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYAL 56
>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4| Length = 259 Score = 93.6 bits (231), Expect = 1e-19 Identities = 44/56 (78%), Positives = 46/56 (82%) Frame = +2 Query: 113 RGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTY 280 RG KKHLKRL APSHWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y Sbjct: 2 RGPKKHLKRLAAPSHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNY 57
>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)| Length = 260 Score = 93.2 bits (230), Expect = 2e-19 Identities = 43/58 (74%), Positives = 48/58 (82%) Frame = +2 Query: 110 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 ARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL R Sbjct: 1 ARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGR 58
>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)| Length = 262 Score = 87.0 bits (214), Expect = 1e-17 Identities = 41/59 (69%), Positives = 45/59 (76%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 M RG KKHLKRL APSHWML KL G +AP+PS+GPH RE LPL + LRNRL YAL R Sbjct: 1 MGRGPKKHLKRLAAPSHWMLXKLSGTYAPRPSAGPHXLRESLPLXVFLRNRLXYALCGR 59
>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 69.3 bits (168), Expect = 2e-12 Identities = 31/38 (81%), Positives = 34/38 (89%) Frame = +2 Query: 164 LDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 LDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 38
>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 69.3 bits (168), Expect = 2e-12 Identities = 31/38 (81%), Positives = 34/38 (89%) Frame = +2 Query: 164 LDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT Sbjct: 1 LDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT 38
>RS4E_METMP (P62428) 30S ribosomal protein S4e| Length = 244 Score = 58.5 bits (140), Expect = 4e-09 Identities = 26/53 (49%), Positives = 37/53 (69%) Frame = +2 Query: 113 RGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYA 271 +G +KHLKRL AP++W L + F +PS GPH + LPL+L++R+ LKYA Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYA 56
>RS4E_PYRHO (O59430) 30S ribosomal protein S4e| Length = 243 Score = 56.6 bits (135), Expect = 2e-08 Identities = 26/57 (45%), Positives = 37/57 (64%) Frame = +2 Query: 113 RGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 +G K+HLKRL APS W +++ +A +P GPH R +PL+ I+R+ L YA T R Sbjct: 4 KGPKRHLKRLAAPSSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
>RS4E_METVA (P14023) 30S ribosomal protein S4e| Length = 244 Score = 56.6 bits (135), Expect = 2e-08 Identities = 26/53 (49%), Positives = 36/53 (67%) Frame = +2 Query: 113 RGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYA 271 +G +KHLKRL AP++W L + F +PS GPH + LPL+LI+R+ LK A Sbjct: 4 KGPRKHLKRLAAPANWQLPRKERTFTVRPSPGPHSMDKSLPLLLIVRDTLKCA 56
>RS4E_PYRKO (Q5JJG0) 30S ribosomal protein S4e| Length = 243 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/57 (45%), Positives = 37/57 (64%) Frame = +2 Query: 113 RGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 +G K+HLKRL AP+ W + + +A +PS GPH + +PLI I+R+ L YA T R Sbjct: 4 KGPKRHLKRLAAPTSWYIHRKAYKWAVRPSPGPHSMKTSIPLIYIVRDYLGYAKTAR 60
>RS4E_PYRFU (Q8U011) 30S ribosomal protein S4e| Length = 243 Score = 55.5 bits (132), Expect = 4e-08 Identities = 25/57 (43%), Positives = 37/57 (64%) Frame = +2 Query: 113 RGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 +G K+HLKRL AP+ W +++ +A +P GPH R +PL+ I+R+ L YA T R Sbjct: 4 KGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
>RS4E_PYRAB (Q9V1U8) 30S ribosomal protein S4e| Length = 243 Score = 55.5 bits (132), Expect = 4e-08 Identities = 25/57 (43%), Positives = 37/57 (64%) Frame = +2 Query: 113 RGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 +G K+HLKRL AP+ W +++ +A +P GPH R +PL+ I+R+ L YA T R Sbjct: 4 KGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
>RS4E_METKA (Q8TW18) 30S ribosomal protein S4e| Length = 260 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = +2 Query: 116 GLKKHLKRLNAPSHWMLD-KLGGAFAPKPSSGPHKARECLPLILILRNRLKYA 271 G K+H+KRL AP W + K GG FAP+P GPH +PL++++R+ L YA Sbjct: 7 GPKRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYA 59
>RS4E_METJA (P54039) 30S ribosomal protein S4e| Length = 244 Score = 52.0 bits (123), Expect = 4e-07 Identities = 26/53 (49%), Positives = 33/53 (62%) Frame = +2 Query: 113 RGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYA 271 +G K+HLKRL AP W L + F +P G H E LPL+LI+R+ LKYA Sbjct: 4 KGPKRHLKRLAAPVRWELPRKIHKFTVRPLPGAHPMSESLPLLLIVRDILKYA 56
>RS4E_AERPE (Q9YF85) 30S ribosomal protein S4e| Length = 253 Score = 49.7 bits (117), Expect = 2e-06 Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 1/60 (1%) Frame = +2 Query: 107 MAR-GLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 MAR G ++ LK L AP W + + +A KP GPH A + LPL+LI+RN L YA T R Sbjct: 1 MARMGGQRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAR 60
>RS4E_PYRAE (Q8ZTD3) 30S ribosomal protein S4e| Length = 238 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%) Frame = +2 Query: 128 HLKRLNAPSHWMLD-KLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 277 HL+R AP+ W + K GG + +PS GPH LPL LI+R+ LKYA T Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKT 53
>RS4E_METTH (O26123) 30S ribosomal protein S4e| Length = 242 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/50 (44%), Positives = 30/50 (60%) Frame = +2 Query: 122 KKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYA 271 +KHLKR +P HW + + KPS GPH LPL++I+R+ LK A Sbjct: 7 RKHLKRFKSPVHWPIHPKEYKWTVKPSPGPHAIENSLPLMIIVRDILKVA 56
>RS4E_HALMA (P22510) 30S ribosomal protein S4E (HS3)| Length = 233 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/48 (37%), Positives = 29/48 (60%) Frame = +2 Query: 128 HLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYA 271 H KRL+ P+ W +++ F K +GPH +PL+++LR+ L YA Sbjct: 3 HQKRLSVPNSWPVERKTATFTVKAGAGPH-GESGVPLLIVLRDVLGYA 49
>RS4E_SULSO (Q9UX94) 30S ribosomal protein S4e| Length = 239 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/52 (34%), Positives = 30/52 (57%) Frame = +2 Query: 128 HLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 H+ R AP M+ K + +P++GPH + +PL +++R+ LK A T R Sbjct: 3 HITRFEAPWFLMISKKQYKWTVRPNAGPHSIEKSIPLAVVIRDYLKLAGTIR 54
>RS4E_ARCFU (O28366) 30S ribosomal protein S4e| Length = 235 Score = 40.0 bits (92), Expect = 0.002 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = +2 Query: 119 LKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 ++ H KRL+AP + + + + KPS GPH +E +PL++++R+ L+ A T R Sbjct: 2 IELHQKRLSAPKTYKIPRKVSKWVVKPSPGPHN-KEAIPLLVLVRDFLELADTGR 55
>RS4E_HALSA (Q9HPC2) 30S ribosomal protein S4e| Length = 233 Score = 39.3 bits (90), Expect = 0.003 Identities = 17/50 (34%), Positives = 29/50 (58%) Frame = +2 Query: 119 LKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKY 268 + H KRL+ P W +++ F K +GPH +PL+++LR+ L+Y Sbjct: 1 MTNHQKRLSVPKSWPVERKTETFTAKAGAGPH-GESGVPLVVVLRDVLEY 49
>RS4E_METAC (Q8TRT5) 30S ribosomal protein S4e| Length = 235 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 128 HLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLK 265 H KRL+ P W + K G + GPH LPL +I+R+ LK Sbjct: 3 HQKRLSVPKSWKVGKKGNKWISTTRPGPHSQARSLPLGIIIRDILK 48
>RS4E_METMA (Q8PV38) 30S ribosomal protein S4e| Length = 235 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 128 HLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLK 265 H KRL+ P W + + G + GPH LPL LI+R+ LK Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLK 48
>RS4_CHLS6 (Q40941) 40S ribosomal protein S4| Length = 242 Score = 37.4 bits (85), Expect = 0.010 Identities = 19/49 (38%), Positives = 30/49 (61%) Frame = +2 Query: 107 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILR 253 MA+G+KKH KR+++ + K G F K SSGPH + + L+ I++ Sbjct: 1 MAKGIKKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIK 49
>RS4E_NANEQ (P62429) 30S ribosomal protein S4e| Length = 234 Score = 36.2 bits (82), Expect = 0.022 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +2 Query: 119 LKKHLKRLNAPSHWMLD-KLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 +K+HL+ L P W + K G + KPS GPH +P+ + LR+ L A R Sbjct: 5 IKRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMR 60
>RS4E_SULTO (Q975J2) 30S ribosomal protein S4e| Length = 243 Score = 35.4 bits (80), Expect = 0.038 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = +2 Query: 128 HLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 H+ R AP L K + + + GPHK E +PL L+L++ L A T R Sbjct: 3 HITRFEAPWFLNLSKKEYKWTIRANPGPHKLSESIPLALLLKHYLNVAETTR 54
>RS4E_SULAC (O05634) 30S ribosomal protein S4e| Length = 244 Score = 32.0 bits (71), Expect = 0.42 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +2 Query: 128 HLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYR 283 H+ R AP + K + + +GPHK +E +PL ++L+ LK T R Sbjct: 3 HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTR 54
>TREA_RABIT (P19813) Trehalase precursor (EC 3.2.1.28) (Alpha,alpha-trehalase)| (Alpha,alpha-trehalose glucohydrolase) Length = 578 Score = 31.2 bits (69), Expect = 0.71 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -3 Query: 248 G*GSEAGIPWPCEDQMMAWGQKLHQACQA 162 G GSE +P PCE Q+ G+ LHQ A Sbjct: 17 GLGSEQALPPPCESQIYCHGELLHQVQMA 45
>SPA12_RAT (Q8R4Z1) Serpin A12 precursor (Visceral adipose-specific serpin)| (Visceral adipose tissue-derived serine protease inhibitor) (Vaspin) Length = 411 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = -1 Query: 250 QDEDQRQAFPGLVRTR*WLGGKSSTKLVKHPVRRGIEPLQMLLQTPSHG 104 QD D + VR + W G K + +L +H + G + LQ L G Sbjct: 22 QDRDAPDTYESPVRVQEWRGKKDARELTRHNMEFGFKLLQRLASNSRQG 70
>SPA12_MOUSE (Q7TMF5) Serpin A12 precursor (Visceral adipose-specific serpin)| (Visceral adipose tissue-derived serine protease inhibitor) (Vaspin) Length = 413 Score = 30.0 bits (66), Expect = 1.6 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = -1 Query: 250 QDEDQRQAFPGLVRTR*WLGGKSSTKLVKHPVRRGIEPLQMLLQTPSHG 104 QD D + VR + W G K + +L +H + G + LQ L G Sbjct: 22 QDRDAPDMYDSPVRVQEWRGKKDARQLARHNMEFGFKLLQRLASNSPQG 70
>B4GT1_HUMAN (P15291) Beta-1,4-galactosyltransferase 1 (EC 2.4.1.-)| (Beta-1,4-GalTase 1) (Beta4Gal-T1) (b4Gal-T1) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 1) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 1) [Includes: L Length = 397 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%) Frame = +2 Query: 170 KLGGAFAPKPSSGPHKARECLPLILILRNR---LKYALTY 280 K+GG +AP+ PHK + +I+ RNR LKY L Y Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWLYY 196
>B4GT1_BOVIN (P08037) Beta-1,4-galactosyltransferase 1 (EC 2.4.1.-)| (Beta-1,4-GalTase 1) (Beta4Gal-T1) (b4Gal-T1) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 1) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 1) [Includes: L Length = 402 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = +2 Query: 170 KLGGAFAPKPSSGPHKARECLPLILILRNR---LKYALTY 280 KLGG + P PHK + +I++ RNR LKY L Y Sbjct: 166 KLGGRYTPMDCISPHK----VAIIILFRNRQEHLKYWLYY 201
>YG3P_YEAST (P48239) Hypothetical 41.3 kDa protein in RSR1-CYS4 intergenic| region Length = 356 Score = 29.3 bits (64), Expect = 2.7 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 101 ATMARGLKKHLKRLNAP-SHWMLDKLGGAFAPKPSSGPHKARE 226 A +AR LKK L SHW LD G F P P P K +E Sbjct: 37 AILARSLKKLEPVLGLVLSHWQLDSKGARFLPAPHR-PEKYKE 78
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 28.9 bits (63), Expect = 3.5 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -1 Query: 187 KSSTKLVKHPVRRGIEPLQMLLQ 119 K+ KL KHP RRG+ PL LQ Sbjct: 11 KTRKKLSKHPRRRGLPPLTRFLQ 33
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -1 Query: 187 KSSTKLVKHPVRRGIEPLQMLLQ 119 K+ KL KHP RRG+ PL LQ Sbjct: 11 KTRKKLRKHPRRRGLPPLTRFLQ 33
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -1 Query: 187 KSSTKLVKHPVRRGIEPLQMLLQ 119 K+ KL KHP RRG+ PL LQ Sbjct: 11 KTRKKLRKHPRRRGLPPLTRFLQ 33
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -1 Query: 187 KSSTKLVKHPVRRGIEPLQMLLQ 119 K+ KL KHP RRG+ PL LQ Sbjct: 11 KTRGKLSKHPRRRGLPPLTRFLQ 33
>B4GT1_MOUSE (P15535) Beta-1,4-galactosyltransferase 1 (EC 2.4.1.-)| (Beta-1,4-GalTase 1) (Beta4Gal-T1) (b4Gal-T1) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 1) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 1) [Includes: L Length = 399 Score = 28.1 bits (61), Expect = 6.0 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = +2 Query: 170 KLGGAFAPKPSSGPHKARECLPLILILRNR---LKYALTY 280 K GG ++PK PHK + +I+ RNR LKY L Y Sbjct: 163 KTGGRYSPKDCVSPHK----VAIIIPFRNRQEHLKYWLYY 198 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,794,757 Number of Sequences: 219361 Number of extensions: 657831 Number of successful extensions: 2263 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 2214 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2262 length of database: 80,573,946 effective HSP length: 69 effective length of database: 65,438,037 effective search space used: 1570512888 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)