ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet58c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018476.1| Zea mays clone EL01N0423G12.d mRNA sequence 86 3e-14
2gb|AY109445.1| Zea mays CL337_1 mRNA sequence 86 3e-14
3dbj|AK066695.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 8e-12
4dbj|AK063158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 8e-12
5dbj|AB070254.1| Oryza sativa (japonica cultivar-group) OsRPT4b m... 78 8e-12
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 70 2e-09
7dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic D... 70 2e-09
8dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D... 70 2e-09
9ref|XM_464508.1| Oryza sativa (japonica cultivar-group), mRNA 58 7e-06
10dbj|AK104698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 7e-06
11dbj|AK099357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 7e-06
12dbj|AK067026.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 7e-06
13dbj|AB033536.1| Oryza sativa (japonica cultivar-group) OsRPT4 mR... 58 7e-06
14ref|NM_123667.2| Arabidopsis thaliana RPT4A; ATPase AT5G43010 (R... 56 3e-05
15gb|AY078040.1| Arabidopsis thaliana AT5g43010/MBD2_21 mRNA, comp... 56 3e-05
16gb|AF372945.1|AF372945 Arabidopsis thaliana AT5g43010/MBD2_21 mR... 56 3e-05
17emb|BX830758.1|CNS0A0SI Arabidopsis thaliana Full-length cDNA Co... 56 3e-05
18dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 56 3e-05
19gb|AF123393.1|AF123393 Arabidopsis thaliana 26S proteasome AAA-A... 56 3e-05
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.002
21dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.002
22dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.002
23gb|DQ443392.1| Bombyx mori 26S proteasome regulatory ATPase subu... 48 0.007
24ref|NM_103580.3| Arabidopsis thaliana ATP binding / ATPase/ hydr... 42 0.44
25gb|AC156613.9| Mus musculus chromosome 1, clone RP24-139P17, com... 42 0.44
26gb|AY114673.1| Arabidopsis thaliana 26S proteasome AAA-ATPase su... 42 0.44
27gb|AC003046.4| Homo sapiens Xp22 PACs RPC11-263P4 and RPC11-164K... 42 0.44
28gb|AY062709.1| Arabidopsis thaliana similar to 26S proteasome AA... 42 0.44
29emb|BX815467.1|CNS0ABDM Arabidopsis thaliana Full-length cDNA Co... 42 0.44
30gb|AC139705.4| Homo sapiens X BAC RP11-102M2 (Roswell Park Cance... 42 0.44
31gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana... 42 0.44
32gb|AC079134.24| Mus musculus chromosome 1, clone RP23-395H12, co... 42 0.44
33emb|AL359474.16| Human DNA sequence from clone RP11-747O7 on chr... 40 1.7
34gb|AC097060.2| Homo sapiens chromosome 1 clone RP11-412H9, compl... 40 1.7
35emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on ch... 40 1.7
36emb|BX511141.27| Zebrafish DNA sequence from clone DKEYP-10C6 in... 38 6.9
37ref|XM_385815.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 38 6.9
38emb|CR354562.12| Zebrafish DNA sequence from clone DKEY-25B23 in... 38 6.9
39gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome... 38 6.9
40gb|AC117221.3| Mus musculus BAC clone RP23-347F2 from 1, complet... 38 6.9
41ref|XM_651301.1| Entamoeba histolytica HM-1:IMSS dual specificit... 38 6.9
42emb|CR648628.2|CNS0EZGA Tetraodon nigroviridis full-length cDNA 38 6.9
43emb|CR645863.2|CNS0EXBH Tetraodon nigroviridis full-length cDNA 38 6.9
44emb|AL136460.28| Human DNA sequence from clone RP11-102J14 on ch... 38 6.9
45emb|AL137184.15| Human DNA sequence from clone RP3-401D24 on chr... 38 6.9
46dbj|AB120534.1| Nicotiana tabacum mRNA, transcriptionally up-reg... 38 6.9
47emb|AL772209.5| Zebrafish DNA sequence from clone DKEY-49F1 in l... 38 6.9
48emb|Y13187.2|HSDMDINT Homo sapiens partial DMD gene, intron 11, ... 38 6.9
49gb|AC004468.1|AC004468 Homo sapiens Xp21 PAC RPCI1-37A12 contain... 38 6.9
50emb|AL772184.3| Tetraodon DNA sequence from clone XX-C0AA012DF08... 38 6.9 
>gb|BT018476.1| Zea mays clone EL01N0423G12.d mRNA sequence
          Length = 1608

 Score = 85.7 bits (43), Expect = 3e-14
 Identities = 106/127 (83%)
 Strand = Plus / Plus

                                                                       
Query: 3   ccagtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctga 62
           |||| ||||| || || ||||||||||| ||| |||| ||||| ||||| || ||| |||
Sbjct: 275 ccagcagtggtccccgatatgtggtcggttgccgaagtaaagtagacaaggagaagttga 334

                                                                       
Query: 63  cagctgcaacacgagttgtccttgacatgacaactttaacaataatgcgcactctaccac 122
           || ||| ||| || ||||| ||||||||||| || || ||||||||||||||||| ||||
Sbjct: 335 catctggaactcgtgttgtacttgacatgacgaccttgacaataatgcgcactcttccac 394

                  
Query: 123 gtgaggt 129
           | |||||
Sbjct: 395 gggaggt 401
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>gb|AY109445.1| Zea mays CL337_1 mRNA sequence
          Length = 2107

 Score = 85.7 bits (43), Expect = 3e-14
 Identities = 106/127 (83%)
 Strand = Plus / Plus

                                                                       
Query: 3   ccagtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctga 62
           |||| ||||| || || ||||||||||| ||| |||| ||||| ||||| || ||| |||
Sbjct: 689 ccagcagtggtccccgatatgtggtcggttgccgaagtaaagtagacaaggagaagttga 748

                                                                       
Query: 63  cagctgcaacacgagttgtccttgacatgacaactttaacaataatgcgcactctaccac 122
           || ||| ||| || ||||| ||||||||||| || || ||||||||||||||||| ||||
Sbjct: 749 catctggaactcgtgttgtacttgacatgacgaccttgacaataatgcgcactcttccac 808

                  
Query: 123 gtgaggt 129
           | |||||
Sbjct: 809 gggaggt 815
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>dbj|AK066695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074G13, full
           insert sequence
          Length = 1556

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 114/139 (82%)
 Strand = Plus / Plus

                                                                       
Query: 3   ccagtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctga 62
           |||| |||||||| || ||||| || |||||| |||| |||||||||||||||||| |||
Sbjct: 347 ccagcagtgggccccgctatgttgttggctgccgaagtaaagttgacaaagaaaagttga 406

                                                                       
Query: 63  cagctgcaacacgagttgtccttgacatgacaactttaacaataatgcgcactctaccac 122
             |||| |||  | ||||| ||||||||||||||  | || || |||||||| || ||||
Sbjct: 407 ttgctggaacgagggttgttcttgacatgacaacccttaccatcatgcgcacactgccac 466

                              
Query: 123 gtgaggttgaccccgtggt 141
           | |||||||| || |||||
Sbjct: 467 gagaggttgatccagtggt 485
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>dbj|AK063158.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C12, full
           insert sequence
          Length = 1695

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 114/139 (82%)
 Strand = Plus / Plus

                                                                       
Query: 3   ccagtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctga 62
           |||| |||||||| || ||||| || |||||| |||| |||||||||||||||||| |||
Sbjct: 350 ccagcagtgggccccgctatgttgttggctgccgaagtaaagttgacaaagaaaagttga 409

                                                                       
Query: 63  cagctgcaacacgagttgtccttgacatgacaactttaacaataatgcgcactctaccac 122
             |||| |||  | ||||| ||||||||||||||  | || || |||||||| || ||||
Sbjct: 410 ttgctggaacgagggttgttcttgacatgacaacccttaccatcatgcgcacactgccac 469

                              
Query: 123 gtgaggttgaccccgtggt 141
           | |||||||| || |||||
Sbjct: 470 gagaggttgatccagtggt 488
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>dbj|AB070254.1| Oryza sativa (japonica cultivar-group) OsRPT4b mRNA for 26S
           proteasome regulatory particle triple-A ATPase
           subunit4b, partial cds
          Length = 1390

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 114/139 (82%)
 Strand = Plus / Plus

                                                                       
Query: 3   ccagtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctga 62
           |||| |||||||| || ||||| || |||||| |||| |||||||||||||||||| |||
Sbjct: 171 ccagcagtgggccccgctatgttgttggctgccgaagtaaagttgacaaagaaaagttga 230

                                                                       
Query: 63  cagctgcaacacgagttgtccttgacatgacaactttaacaataatgcgcactctaccac 122
             |||| |||  | ||||| ||||||||||||||  | || || |||||||| || ||||
Sbjct: 231 ttgctggaacgagggttgttcttgacatgacaacccttaccatcatgcgcacactgccac 290

                              
Query: 123 gtgaggttgaccccgtggt 141
           | |||||||| || |||||
Sbjct: 291 gagaggttgatccagtggt 309
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 104/127 (81%)
 Strand = Plus / Plus

                                                                            
Query: 3        ccagtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctga 62
                |||| |||||||| || ||||| || |||||| |||| |||||||||||||||||| |||
Sbjct: 23800193 ccagcagtgggccccgctatgttgttggctgccgaagtaaagttgacaaagaaaagttga 23800252

                                                                            
Query: 63       cagctgcaacacgagttgtccttgacatgacaactttaacaataatgcgcactctaccac 122
                  |||| |||  | ||||| ||||||||||||||  | || || |||||||| || ||||
Sbjct: 23800253 ttgctggaacgagggttgttcttgacatgacaacccttaccatcatgcgcacactgccac 23800312

                       
Query: 123      gtgaggt 129
                | |||||
Sbjct: 23800313 gagaggt 23800319
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>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0029C06
          Length = 156500

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 104/127 (81%)
 Strand = Plus / Plus

                                                                          
Query: 3      ccagtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctga 62
              |||| |||||||| || ||||| || |||||| |||| |||||||||||||||||| |||
Sbjct: 148269 ccagcagtgggccccgctatgttgttggctgccgaagtaaagttgacaaagaaaagttga 148328

                                                                          
Query: 63     cagctgcaacacgagttgtccttgacatgacaactttaacaataatgcgcactctaccac 122
                |||| |||  | ||||| ||||||||||||||  | || || |||||||| || ||||
Sbjct: 148329 ttgctggaacgagggttgttcttgacatgacaacccttaccatcatgcgcacactgccac 148388

                     
Query: 123    gtgaggt 129
              | |||||
Sbjct: 148389 gagaggt 148395
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>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0556B08
          Length = 136775

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 104/127 (81%)
 Strand = Plus / Plus

                                                                         
Query: 3     ccagtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctga 62
             |||| |||||||| || ||||| || |||||| |||| |||||||||||||||||| |||
Sbjct: 39858 ccagcagtgggccccgctatgttgttggctgccgaagtaaagttgacaaagaaaagttga 39917

                                                                         
Query: 63    cagctgcaacacgagttgtccttgacatgacaactttaacaataatgcgcactctaccac 122
               |||| |||  | ||||| ||||||||||||||  | || || |||||||| || ||||
Sbjct: 39918 ttgctggaacgagggttgttcttgacatgacaacccttaccatcatgcgcacactgccac 39977

                    
Query: 123   gtgaggt 129
             | |||||
Sbjct: 39978 gagaggt 39984
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>ref|XM_464508.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1693

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  gttgtccttgacatgacaactttaacaataatgcgcactctaccacgtgaggttgacccc 136
           ||||| ||||||||||||||  | ||||| |||||||| || ||||||||||| ||||| 
Sbjct: 390 gttgttcttgacatgacaacactgacaatcatgcgcacacttccacgtgaggtggaccct 449

                
Query: 137 gtggt 141
           |||||
Sbjct: 450 gtggt 454
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>dbj|AK104698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C01, full
           insert sequence
          Length = 1326

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  gttgtccttgacatgacaactttaacaataatgcgcactctaccacgtgaggttgacccc 136
           ||||| ||||||||||||||  | ||||| |||||||| || ||||||||||| ||||| 
Sbjct: 23  gttgttcttgacatgacaacactgacaatcatgcgcacacttccacgtgaggtggaccct 82

                
Query: 137 gtggt 141
           |||||
Sbjct: 83  gtggt 87
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>dbj|AK099357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041G07, full
           insert sequence
          Length = 1692

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  gttgtccttgacatgacaactttaacaataatgcgcactctaccacgtgaggttgacccc 136
           ||||| ||||||||||||||  | ||||| |||||||| || ||||||||||| ||||| 
Sbjct: 389 gttgttcttgacatgacaacactgacaatcatgcgcacacttccacgtgaggtggaccct 448

                
Query: 137 gtggt 141
           |||||
Sbjct: 449 gtggt 453
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>dbj|AK067026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091H06, full
           insert sequence
          Length = 1718

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  gttgtccttgacatgacaactttaacaataatgcgcactctaccacgtgaggttgacccc 136
           ||||| ||||||||||||||  | ||||| |||||||| || ||||||||||| ||||| 
Sbjct: 391 gttgttcttgacatgacaacactgacaatcatgcgcacacttccacgtgaggtggaccct 450

                
Query: 137 gtggt 141
           |||||
Sbjct: 451 gtggt 455
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>dbj|AB033536.1| Oryza sativa (japonica cultivar-group) OsRPT4 mRNA for 26S
           proteasome regulatory particle triple-A ATPase subunit4,
           complete cds
          Length = 1637

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  gttgtccttgacatgacaactttaacaataatgcgcactctaccacgtgaggttgacccc 136
           ||||| ||||||||||||||  | ||||| |||||||| || ||||||||||| ||||| 
Sbjct: 390 gttgttcttgacatgacaacactgacaatcatgcgcacacttccacgtgaggtggaccct 449

                
Query: 137 gtggt 141
           |||||
Sbjct: 450 gtggt 454
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>ref|NM_123667.2| Arabidopsis thaliana RPT4A; ATPase AT5G43010 (RPT4A) mRNA, complete
           cds
          Length = 1505

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                       
Query: 8   agtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgacagct 67
           ||||| |||||||||||||| || ||| |||||||||| || || |||||||| ||  | 
Sbjct: 361 agtggtccacgttatgtggtgggttgccgaagcaaagtggataaggaaaagctaacctcc 420

                                                       
Query: 68  gcaacacgagttgtccttgacatgacaactttaacaataatgcg 111
           | ||| |||||||| || || ||||||||  ||||||| |||||
Sbjct: 421 ggaactcgagttgttctcgatatgacaacactaacaattatgcg 464
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>gb|AY078040.1| Arabidopsis thaliana AT5g43010/MBD2_21 mRNA, complete cds
          Length = 1200

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                       
Query: 8   agtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgacagct 67
           ||||| |||||||||||||| || ||| |||||||||| || || |||||||| ||  | 
Sbjct: 241 agtggtccacgttatgtggtgggttgccgaagcaaagtggataaggaaaagctaacctcc 300

                                                       
Query: 68  gcaacacgagttgtccttgacatgacaactttaacaataatgcg 111
           | ||| |||||||| || || ||||||||  ||||||| |||||
Sbjct: 301 ggaactcgagttgttctcgatatgacaacactaacaattatgcg 344
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>gb|AF372945.1|AF372945 Arabidopsis thaliana AT5g43010/MBD2_21 mRNA, complete cds
          Length = 1508

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                       
Query: 8   agtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgacagct 67
           ||||| |||||||||||||| || ||| |||||||||| || || |||||||| ||  | 
Sbjct: 361 agtggtccacgttatgtggtgggttgccgaagcaaagtggataaggaaaagctaacctcc 420

                                                       
Query: 68  gcaacacgagttgtccttgacatgacaactttaacaataatgcg 111
           | ||| |||||||| || || ||||||||  ||||||| |||||
Sbjct: 421 ggaactcgagttgttctcgatatgacaacactaacaattatgcg 464
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>emb|BX830758.1|CNS0A0SI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS20ZE06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1468

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                       
Query: 8   agtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgacagct 67
           ||||| |||||||||||||| || ||| |||||||||| || || |||||||| ||  | 
Sbjct: 347 agtggtccacgttatgtggtgggttgccgaagcaaagtggataaggaaaagctaacctcc 406

                                                       
Query: 68  gcaacacgagttgtccttgacatgacaactttaacaataatgcg 111
           | ||| |||||||| || || ||||||||  ||||||| |||||
Sbjct: 407 ggaactcgagttgttctcgatatgacaacactaacaattatgcg 450
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>dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBD2
          Length = 79976

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 85/104 (81%)
 Strand = Plus / Minus

                                                                         
Query: 8     agtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgacagct 67
             ||||| |||||||||||||| || ||| |||||||||| || || |||||||| ||  | 
Sbjct: 79276 agtggtccacgttatgtggtgggttgccgaagcaaagtggataaggaaaagctaacctcc 79217

                                                         
Query: 68    gcaacacgagttgtccttgacatgacaactttaacaataatgcg 111
             | ||| |||||||| || || ||||||||  ||||||| |||||
Sbjct: 79216 ggaactcgagttgttctcgatatgacaacactaacaattatgcg 79173
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>gb|AF123393.1|AF123393 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT4a
           (RPT4a) mRNA, complete cds
          Length = 1360

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                       
Query: 8   agtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgacagct 67
           ||||| |||||||||||||| || ||| |||||||||| || || |||||||| ||  | 
Sbjct: 249 agtggtccacgttatgtggtgggttgccgaagcaaagtggataaggaaaagctaacctcc 308

                                                       
Query: 68  gcaacacgagttgtccttgacatgacaactttaacaataatgcg 111
           | ||| |||||||| || || ||||||||  ||||||| |||||
Sbjct: 309 ggaactcgagttgttctcgatatgacaacactaacaattatgcg 352
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                    
Query: 77      gttgtccttgacatgacaactttaacaataatgcgcactctaccacgtgaggt 129
               ||||| ||||||||||||||  | ||||| |||||||| || |||||||||||
Sbjct: 5598139 gttgttcttgacatgacaacactgacaatcatgcgcacacttccacgtgaggt 5598087
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>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0026H03
          Length = 151827

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 77     gttgtccttgacatgacaactttaacaataatgcgcactctaccacgtgaggt 129
              ||||| ||||||||||||||  | ||||| |||||||| || |||||||||||
Sbjct: 142874 gttgttcttgacatgacaacactgacaatcatgcgcacacttccacgtgaggt 142822
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>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419A09
          Length = 168064

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 77    gttgtccttgacatgacaactttaacaataatgcgcactctaccacgtgaggt 129
             ||||| ||||||||||||||  | ||||| |||||||| || |||||||||||
Sbjct: 25875 gttgttcttgacatgacaacactgacaatcatgcgcacacttccacgtgaggt 25823
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>gb|DQ443392.1| Bombyx mori 26S proteasome regulatory ATPase subunit 10B mRNA,
           complete cds
          Length = 1602

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 70  aacacgagttgtccttgacatgacaactttaacaataatg 109
           ||||||||||| |||||||||||| ||| | |||||||||
Sbjct: 382 aacacgagttgcccttgacatgaccactcttacaataatg 421
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>ref|NM_103580.3| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/
           nucleoside-triphosphatase/ nucleotide binding AT1G45000
           mRNA, complete cds
          Length = 1555

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 5   agtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgaca 64
           |||||||| || ||||||||||| || ||  | ||||| || ||||| |||||||| || 
Sbjct: 314 agtagtggccctcgttatgtggtgggttgtcgtagcaaggtggacaaggaaaagcttact 373

                                        
Query: 65  gctgcaacacgagttgtccttgacatgac 93
            ||| ||| ||||||||||| || |||||
Sbjct: 374 tctggaactcgagttgtcctggatatgac 402
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>gb|AC156613.9| Mus musculus chromosome 1, clone RP24-139P17, complete sequence
          Length = 132714

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 21    atgtggtcggctgcagaagcaaagt 45
             |||||||| ||||||||||||||||
Sbjct: 58941 atgtggtctgctgcagaagcaaagt 58965
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>gb|AY114673.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT4a-like
           protein (At1g45000) mRNA, complete cds
          Length = 1254

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 5   agtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgaca 64
           |||||||| || ||||||||||| || ||  | ||||| || ||||| |||||||| || 
Sbjct: 238 agtagtggccctcgttatgtggtgggttgtcgtagcaaggtggacaaggaaaagcttact 297

                                        
Query: 65  gctgcaacacgagttgtccttgacatgac 93
            ||| ||| ||||||||||| || |||||
Sbjct: 298 tctggaactcgagttgtcctggatatgac 326
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>gb|AC003046.4| Homo sapiens Xp22 PACs RPC11-263P4 and RPC11-164K3 complete sequence
          Length = 166757

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 30    gctgcagaagcaaagttgacaaaga 54
             |||| ||||||||||||||||||||
Sbjct: 83193 gctggagaagcaaagttgacaaaga 83217
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>gb|AY062709.1| Arabidopsis thaliana similar to 26S proteasome AAA-ATPase subunit
           RPT4a (At1g45000; F27F5.8) mRNA, complete cds
          Length = 1465

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 5   agtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgaca 64
           |||||||| || ||||||||||| || ||  | ||||| || ||||| |||||||| || 
Sbjct: 314 agtagtggccctcgttatgtggtgggttgtcgtagcaaggtggacaaggaaaagcttact 373

                                        
Query: 65  gctgcaacacgagttgtccttgacatgac 93
            ||| ||| ||||||||||| || |||||
Sbjct: 374 tctggaactcgagttgtcctggatatgac 402
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>emb|BX815467.1|CNS0ABDM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS62ZE04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1297

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 5   agtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgaca 64
           |||||||| || ||||||||||| || ||  | ||||| || ||||| |||||||| || 
Sbjct: 233 agtagtggccctcgttatgtggtgggttgtcgtagcaaggtggacaaggaaaagcttact 292

                                        
Query: 65  gctgcaacacgagttgtccttgacatgac 93
            ||| ||| ||||||||||| || |||||
Sbjct: 293 tctggaactcgagttgtcctggatatgac 321
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>gb|AC139705.4| Homo sapiens X BAC RP11-102M2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 148316

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 30     gctgcagaagcaaagttgacaaaga 54
              |||| ||||||||||||||||||||
Sbjct: 126604 gctggagaagcaaagttgacaaaga 126580
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>gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana BAC F27F5 from chromosome I,
             complete sequence
          Length = 137336

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                         
Query: 5     agtagtgggccacgttatgtggtcggctgcagaagcaaagttgacaaagaaaagctgaca 64
             |||||||| || ||||||||||| || ||  | ||||| || ||||| |||||||| || 
Sbjct: 35784 agtagtggccctcgttatgtggtgggttgtcgtagcaaggtggacaaggaaaagcttact 35843

                                          
Query: 65    gctgcaacacgagttgtccttgacatgac 93
              ||| ||| ||||||||||| || |||||
Sbjct: 35844 tctggaactcgagttgtcctggatatgac 35872
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>gb|AC079134.24| Mus musculus chromosome 1, clone RP23-395H12, complete sequence
          Length = 204915

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 21    atgtggtcggctgcagaagcaaagt 45
             |||||||| ||||||||||||||||
Sbjct: 30429 atgtggtctgctgcagaagcaaagt 30405
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>emb|AL359474.16| Human DNA sequence from clone RP11-747O7 on chromosome 6, complete
              sequence
          Length = 129451

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     caaagttgacaaagaaaagc 59
              ||||||||||||||||||||
Sbjct: 125115 caaagttgacaaagaaaagc 125096
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>gb|AC097060.2| Homo sapiens chromosome 1 clone RP11-412H9, complete sequence
          Length = 139177

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    agttgtccttgacatgacaacttt 99
             |||| |||||||||||||||||||
Sbjct: 61393 agttttccttgacatgacaacttt 61370
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>emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on chromosome 2, complete
             sequence
          Length = 216706

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aaaagctgacagctgcaaca 73
             ||||||||||||||||||||
Sbjct: 52726 aaaagctgacagctgcaaca 52745
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>emb|BX511141.27| Zebrafish DNA sequence from clone DKEYP-10C6 in linkage group 23,
             complete sequence
          Length = 165253

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 45    ttgacaaagaaaagctgac 63
             |||||||||||||||||||
Sbjct: 66189 ttgacaaagaaaagctgac 66171
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>ref|XM_385815.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05639.1)
           partial mRNA
          Length = 1425

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 23  gtggtcggctgcagaagcaaagt 45
           ||||||||| |||||||||||||
Sbjct: 312 gtggtcggcggcagaagcaaagt 290
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>emb|CR354562.12| Zebrafish DNA sequence from clone DKEY-25B23 in linkage group 23,
              complete sequence
          Length = 201764

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 45     ttgacaaagaaaagctgac 63
              |||||||||||||||||||
Sbjct: 182725 ttgacaaagaaaagctgac 182743
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>gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome 1, complete sequence
          Length = 179626

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    tgacaaagaaaagctgaca 64
             |||||||||||||||||||
Sbjct: 66029 tgacaaagaaaagctgaca 66047
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>gb|AC117221.3| Mus musculus BAC clone RP23-347F2 from 1, complete sequence
          Length = 194077

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 46     tgacaaagaaaagctgaca 64
              |||||||||||||||||||
Sbjct: 168514 tgacaaagaaaagctgaca 168532
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>ref|XM_651301.1| Entamoeba histolytica HM-1:IMSS dual specificity protein
           phosphatase (13.t00053) partial mRNA
          Length = 342

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 41  aaagttgacaaagaaaagc 59
           |||||||||||||||||||
Sbjct: 298 aaagttgacaaagaaaagc 316
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>emb|CR648628.2|CNS0EZGA Tetraodon nigroviridis full-length cDNA
          Length = 1266

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 36 gaagcaaagttgacaaagaaaag 58
          ||||||||||||||| |||||||
Sbjct: 27 gaagcaaagttgacagagaaaag 5
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>emb|CR645863.2|CNS0EXBH Tetraodon nigroviridis full-length cDNA
          Length = 1284

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 36 gaagcaaagttgacaaagaaaag 58
          ||||||||||||||| |||||||
Sbjct: 43 gaagcaaagttgacagagaaaag 21
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>emb|AL136460.28| Human DNA sequence from clone RP11-102J14 on chromosome 20 Contains a
              novel gene and the PA2G4P2 gene for
              proliferation-associated 2G4 pseudogene 2, complete
              sequence
          Length = 139030

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 54     aaaagctgacagctgcaac 72
              |||||||||||||||||||
Sbjct: 109272 aaaagctgacagctgcaac 109254
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>emb|AL137184.15| Human DNA sequence from clone RP3-401D24 on chromosome 6, complete
             sequence
          Length = 112124

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    cagaagcaaagttgacaaa 52
             |||||||||||||||||||
Sbjct: 95353 cagaagcaaagttgacaaa 95371
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>dbj|AB120534.1| Nicotiana tabacum mRNA, transcriptionally up-regulated region
            associated with genomic hypomethylation, clone: O17
          Length = 1085

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 52/63 (82%)
 Strand = Plus / Minus

                                                                        
Query: 70   aacacgagttgtccttgacatgacaactttaacaataatgcgcactctaccacgtgaggt 129
            |||| |||| || ||||||||||||||| | ||||| |||||  | || || ||||||||
Sbjct: 1069 aacaagagtggttcttgacatgacaactctcacaatcatgcgtgccctcccgcgtgaggt 1010

               
Query: 130  tga 132
            |||
Sbjct: 1009 tga 1007
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>emb|AL772209.5| Zebrafish DNA sequence from clone DKEY-49F1 in linkage group 17,
             complete sequence
          Length = 202805

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    tgtccttgacatgacaact 97
             |||||||||||||||||||
Sbjct: 38897 tgtccttgacatgacaact 38879
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>emb|Y13187.2|HSDMDINT Homo sapiens partial DMD gene, intron 11, isolate 381
          Length = 29678

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    gacaaagaaaagctgacag 65
             |||||||||||||||||||
Sbjct: 13980 gacaaagaaaagctgacag 13998
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>gb|AC004468.1|AC004468 Homo sapiens Xp21 PAC RPCI1-37A12 containing exons 10 to 16 of the
             Duchenne Muscular Dystrophy gene, complete sequence
          Length = 127757

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    gacaaagaaaagctgacag 65
             |||||||||||||||||||
Sbjct: 48996 gacaaagaaaagctgacag 49014
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>emb|AL772184.3| Tetraodon DNA sequence from clone XX-C0AA012DF08, complete sequence
          Length = 69520

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 41   aaagttgacaaagaaaagc 59
            |||||||||||||||||||
Sbjct: 4458 aaagttgacaaagaaaagc 4440


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,123,055
Number of Sequences: 3902068
Number of extensions: 1123055
Number of successful extensions: 81973
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81865
Number of HSP's gapped (non-prelim): 108
length of query: 144
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 123
effective length of database: 17,151,101,840
effective search space: 2109585526320
effective search space used: 2109585526320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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