ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet58a01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 498 bits (251), Expect = e-138 Identities = 257/259 (99%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120131 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 120072 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120071 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 120012 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120011 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 119952 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119951 gtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 119892 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 119891 aaacatcttagtagccaga 119873 Score = 498 bits (251), Expect = e-138 Identities = 257/259 (99%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94763 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 94822 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94823 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 94882 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94883 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 94942 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94943 gtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 95002 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 95003 aaacatcttagtagccaga 95021
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75771 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 75712 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75711 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 75652 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75651 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 75592 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75591 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 75532 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 75531 aaacatcttagtagccaga 75513 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 215 gcaggcaagagacaacctggcgaactgaaacatcttagta 254 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381767 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 381826 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381827 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 381886 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381887 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 381946 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381947 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 382006 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 382007 aaacatcttagtagccaga 382025 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 215 gcaggcaagagacaacctggcgaactgaaacatcttagta 254 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 215 gcaggcaagagacaacctggcgaactgaaacatcttagta 254 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113862 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 113803 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113802 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 113743 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113742 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 113683 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113682 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 113623 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 113622 aaacatcttagtagccaga 113604 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 215 gcaggcaagagacaacctggcgaactgaaacatcttagta 254 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368544 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 368485 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368484 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 368425 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368424 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 368365 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368364 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 368305 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 368304 aaacatcttagtagccaga 368286 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185149 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 185090 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185089 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 185030 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185029 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 184970 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184969 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 184910 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 184909 aaacatcttagtagccaga 184891 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 215 gcaggcaagagacaacctggcgaactgaaacatcttagta 254 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44956 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 44897 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44896 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 44837 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44836 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 44777 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44776 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 44717 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 44716 aaacatcttagtagccaga 44698 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20162 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 20221 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20222 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 20281 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20282 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 20341 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20342 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 20401 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 20402 aaacatcttagtagccaga 20420
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1585 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 1526 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1525 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 1466 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1465 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 1406 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1405 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 1346 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 1345 aaacatcttagtagccaga 1327
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123795 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 123736 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123735 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 123676 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123675 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 123616 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123615 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 123556 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 123555 aaacatcttagtagccaga 123537 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99042 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 99101 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99102 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 99161 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99162 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 99221 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99222 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 99281 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 99282 aaacatcttagtagccaga 99300
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124512 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 124453 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124452 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 124393 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124392 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 124333 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124332 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 124273 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 124272 aaacatcttagtagccaga 124254 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99719 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 99778 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99779 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 99838 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99839 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 99898 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99899 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 99958 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 99959 aaacatcttagtagccaga 99977
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 490 bits (247), Expect = e-135 Identities = 256/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75707 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 75766 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75767 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 75826 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75827 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 75886 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75887 gtcaaccttttaaactgcctgcggaatccatgagcaggcaagagacaacctggcgaactg 75946 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 75947 aaacatcttagtagccaga 75965 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ggcgaactgaaacatcttag 252 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118912 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 118853 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 118852 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 118793 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118792 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 118733 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118732 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 118673 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 118672 aaacatcttagtagccaga 118654
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119996 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 119937 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 119936 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 119877 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119876 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 119817 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119816 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 119757 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 119756 aaacatcttagtagccaga 119738 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95160 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 95219 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95220 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 95279 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95280 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 95339 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95340 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 95399 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 95400 aaacatcttagtagccaga 95418
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119996 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 119937 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 119936 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 119877 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119876 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 119817 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119816 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 119757 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 119756 aaacatcttagtagccaga 119738 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95160 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 95219 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95220 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 95279 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95280 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 95339 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95340 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 95399 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 95400 aaacatcttagtagccaga 95418
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119945 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 119886 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 119885 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 119826 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119825 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 119766 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119765 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 119706 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 119705 aaacatcttagtagccaga 119687 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95105 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 95164 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95165 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 95224 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95225 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 95284 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95285 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 95344 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 95345 aaacatcttagtagccaga 95363
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507738 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 31507797 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 31507798 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 31507857 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507858 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 31507917 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507918 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 31507977 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 31507978 aaacatcttagtagccaga 31507996
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84858 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 84799 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 84798 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 84739 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84738 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 84679 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84678 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 84619 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 84618 aaacatcttagtagccaga 84600
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119965 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 119906 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 119905 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 119846 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119845 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 119786 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119785 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 119726 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 119725 aaacatcttagtagccaga 119707 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95153 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 95212 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95213 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 95272 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95273 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 95332 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95333 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 95392 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 95393 aaacatcttagtagccaga 95411
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122202 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 122261 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 122262 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 122321 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122322 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 122381 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122382 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 122441 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 122442 aaacatcttagtagccaga 122460 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13927 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 13986 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 13987 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 14046 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14047 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 14106 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14107 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 14166 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 14167 aaacatcttagtagccaga 14185
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140735 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 140794 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 140795 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 140854 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140855 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 140914 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140915 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 140974 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 140975 aaacatcttagtagccaga 140993
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93331 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 93390 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 93391 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 93450 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93451 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 93510 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93511 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 93570 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 93571 aaacatcttagtagccaga 93589
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58684 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 58625 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 58624 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 58565 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58564 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 58505 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58504 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 58445 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 58444 aaacatcttagtagccaga 58426
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27395 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 27454 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 27455 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 27514 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27515 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 27574 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27575 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 27634 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 27635 aaacatcttagtagccaga 27653
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268087 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 9268146 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9268147 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 9268206 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268207 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 9268266 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268267 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 9268326 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 9268327 aaacatcttagtagccaga 9268345 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227587 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 9227646 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9227647 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 9227706 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227707 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 9227766 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227767 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 9227826 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 9227827 aaacatcttagtagccaga 9227845 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164176 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 9164235 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9164236 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 9164295 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164296 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 9164355 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164356 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 9164415 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 9164416 aaacatcttagtagccaga 9164434 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056001 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 9056060 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9056061 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 9056120 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056121 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 9056180 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056181 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 9056240 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 9056241 aaacatcttagtagccaga 9056259
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938072 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 19938131 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 19938132 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 19938191 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938192 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 19938251 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938252 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 19938311 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 19938312 aaacatcttagtagccaga 19938330 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10386939 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 10386998 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 10386999 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 10387058 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387059 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 10387118 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387119 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 10387178 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 10387179 aaacatcttagtagccaga 10387197 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277359 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 10277300 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 10277299 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 10277240 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277239 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 10277180 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277179 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 10277120 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 10277119 aaacatcttagtagccaga 10277101
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598254 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 31598313 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 31598314 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 31598373 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598374 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 31598433 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598434 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 31598493 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 31598494 aaacatcttagtagccaga 31598512
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525570 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 33525629 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 33525630 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 33525689 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525690 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 33525749 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525750 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 33525809 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 33525810 aaacatcttagtagccaga 33525828 Score = 58.0 bits (29), Expect = 1e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 19 agtagcaccttaggatggcatagccttaa 47 ||||||||||||||||||||||||||||| Sbjct: 8270691 agtagcaccttaggatggcatagccttaa 8270719 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 100 ccagagacgaggaagggcgtagcaagcgacgaaatgcttc 139 ||||| |||||| ||||| ||||||||||||||||||||| Sbjct: 19455157 ccagatacgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47971 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 47912 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 47911 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 47852 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47851 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 47792 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47791 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 47732 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 47731 aaacatcttagtagccaga 47713
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70767 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 70826 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 70827 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 70886 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70887 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 70946 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70947 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 71006 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 71007 aaacatcttagtagccaga 71025
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949348 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 19949407 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 19949408 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 19949467 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949468 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 19949527 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949528 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 19949587 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 19949588 aaacatcttagtagccaga 19949606 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10392978 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 10393037 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 10393038 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 10393097 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393098 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 10393157 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393158 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 10393217 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 10393218 aaacatcttagtagccaga 10393236 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283398 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 10283339 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 10283338 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 10283279 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283278 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 10283219 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283218 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 10283159 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 10283158 aaacatcttagtagccaga 10283140
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119939 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 119880 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 119879 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 119820 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119819 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 119760 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119759 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 119700 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 119699 aaacatcttagtagccaga 119681 Score = 482 bits (243), Expect = e-133 Identities = 255/259 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95100 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 95159 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95160 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 95219 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95220 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 95279 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95280 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 95339 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 95340 aaacatcttagtagccaga 95358
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 474 bits (239), Expect = e-131 Identities = 254/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9242194 ataagatccttccatttagtagcaccttaggatggcatagccttaatgttaatggcgagg 9242135 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9242134 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 9242075 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242074 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 9242015 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242014 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 9241955 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 9241954 aaacatcttagtagccaga 9241936 Score = 46.1 bits (23), Expect = 0.055 Identities = 23/23 (100%) Strand = Plus / Minus Query: 238 actgaaacatcttagtagccaga 260 ||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccaga 10177907
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 474 bits (239), Expect = e-131 Identities = 254/259 (98%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 53407 ataagatccttccatttagtagcaccttaggatggcatagccttaatgttaatggcgagg 53348 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 53347 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 53288 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53287 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 53228 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53227 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 53168 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 53167 aaacatcttagtagccaga 53149
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 468 bits (236), Expect = e-129 Identities = 255/260 (98%), Gaps = 1/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123735 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 123676 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag-ggcgta 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 123675 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagaggcgta 123616 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123615 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 123556 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123555 ggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaact 123496 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 123495 gaaacatcttagtagccaga 123476 Score = 468 bits (236), Expect = e-129 Identities = 255/260 (98%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99002 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 99061 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag-ggcgta 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 99062 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagaggcgta 99121 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99122 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 99181 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99182 ggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaact 99241 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 99242 gaaacatcttagtagccaga 99261
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 468 bits (236), Expect = e-129 Identities = 255/260 (98%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5355 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 5414 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag-ggcgta 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5415 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagaggcgta 5474 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5475 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 5534 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5535 ggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaact 5594 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 5595 gaaacatcttagtagccaga 5614
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 458 bits (231), Expect = e-126 Identities = 252/259 (97%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123529 ataagatccttccatttagtagcaccttaggatggcatagccttaaagttaatggcgagg 123470 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 123469 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagatgaggaagggcgtag 123410 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123409 caagcgacgaaatgcttcggggagttgaaattaagcatagatccggagattcccaaatag 123350 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123349 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 123290 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 123289 aaacatcttagtagccaga 123271
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 458 bits (231), Expect = e-126 Identities = 252/259 (97%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 12826070 ataagatccttccatttagtagcaccttaggatggcatagccttaaagttaatggcgagg 12826011 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 12826010 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagatgaggaagggcgtag 12825951 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12825950 caagcgacgaaatgcttcggggagttgaaattaagcatagatccggagattcccaaatag 12825891 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825890 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 12825831 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 12825830 aaacatcttagtagccaga 12825812
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 452 bits (228), Expect = e-124 Identities = 240/244 (98%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1486 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 1545 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1546 ttcaaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtag 1605 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1606 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 1665 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1666 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 1725 Query: 242 aaac 245 |||| Sbjct: 1726 aaac 1729
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 418 bits (211), Expect = e-114 Identities = 248/259 (95%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 139645 ataagatccttccatttagcagcaccttaggatggcatagccttaacgttaacggcgagg 139586 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 139585 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 139526 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 139525 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 139466 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139465 gtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 139407 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 139406 aaacatcttagtagccaga 139388 Score = 418 bits (211), Expect = e-114 Identities = 248/259 (95%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 110300 ataagatccttccatttagcagcaccttaggatggcatagccttaacgttaacggcgagg 110359 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110360 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 110419 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110420 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 110479 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110480 gtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 110538 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 110539 aaacatcttagtagccaga 110557
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 410 bits (207), Expect = e-112 Identities = 247/259 (95%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 135040 ataagatccttccatttagcagcaccttaggatggcataaccttaacgttaatggcgagg 134981 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134980 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 134921 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 134920 taagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 134861 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134860 gtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 134802 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 134801 aaacatcttagtagccaga 134783 Score = 410 bits (207), Expect = e-112 Identities = 247/259 (95%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 105242 ataagatccttccatttagcagcaccttaggatggcataaccttaacgttaatggcgagg 105301 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105302 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 105361 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105362 taagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 105421 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105422 gtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 105480 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 105481 aaacatcttagtagccaga 105499
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 410 bits (207), Expect = e-112 Identities = 247/259 (95%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||| Sbjct: 127923 ataagatccttccatttagcagcaccttaggatggcatagccttcacgtgaatggcgagg 127864 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 127863 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 127804 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 127803 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 127744 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 127743 gtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 127685 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 127684 aaacatcttagtagccaga 127666 Score = 410 bits (207), Expect = e-112 Identities = 247/259 (95%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||| Sbjct: 106999 ataagatccttccatttagcagcaccttaggatggcatagccttcacgtgaatggcgagg 107058 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107059 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 107118 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107119 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 107178 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107179 gtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 107237 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 107238 aaacatcttagtagccaga 107256
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 410 bits (207), Expect = e-112 Identities = 247/259 (95%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 134282 ataagatccttctatttagcagcaccttaggatggcatagccttaacgtgaatggcgagg 134223 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134222 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 134163 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 134162 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 134103 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134102 gtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 134044 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 134043 aaacatcttagtagccaga 134025 Score = 410 bits (207), Expect = e-112 Identities = 247/259 (95%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 103689 ataagatccttctatttagcagcaccttaggatggcatagccttaacgtgaatggcgagg 103748 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103749 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 103808 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 103809 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 103868 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103869 gtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 103927 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 103928 aaacatcttagtagccaga 103946
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 402 bits (203), Expect = e-109 Identities = 246/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 136650 ataagatccatccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 136591 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 136590 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 136531 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 136530 taagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 136471 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 136470 gtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 136412 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 136411 aaacatcttagtagccaga 136393 Score = 402 bits (203), Expect = e-109 Identities = 246/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 105775 ataagatccatccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 105834 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105835 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 105894 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105895 taagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 105954 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105955 gtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 106013 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 106014 aaacatcttagtagccaga 106032
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 402 bits (203), Expect = e-109 Identities = 246/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 134018 ataagatctttccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 133959 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 133958 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 133899 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 133898 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaatag 133839 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133838 gttaaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 133780 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 133779 aaacatcttagtagccaga 133761 Score = 402 bits (203), Expect = e-109 Identities = 246/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 104631 ataagatctttccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 104690 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104691 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 104750 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 104751 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaatag 104810 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104811 gttaaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 104869 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 104870 aaacatcttagtagccaga 104888
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 394 bits (199), Expect = e-107 Identities = 245/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 133057 ataagatctttccatttagcagcaccttaggatggcatagccttaaagttaagagcgagg 132998 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132997 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 132938 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 132937 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaatag 132878 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132877 gttaaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 132819 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 132818 aaacatcttagtagccaga 132800 Score = 394 bits (199), Expect = e-107 Identities = 245/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 103707 ataagatctttccatttagcagcaccttaggatggcatagccttaaagttaagagcgagg 103766 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103767 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 103826 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 103827 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaatag 103886 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103887 gttaaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 103945 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 103946 aaacatcttagtagccaga 103964
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 387 bits (195), Expect = e-104 Identities = 244/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||| Sbjct: 132834 ataagatccatccatttagcagcaccttaggatggcatagccttaaaattaagggcgagg 132775 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132774 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 132715 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 132714 taagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 132655 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132654 gttaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 132596 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 132595 aaacatcttagtagccaga 132577 Score = 387 bits (195), Expect = e-104 Identities = 244/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||| Sbjct: 104044 ataagatccatccatttagcagcaccttaggatggcatagccttaaaattaagggcgagg 104103 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104104 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 104163 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 104164 taagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 104223 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104224 gttaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 104282 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 104283 aaacatcttagtagccaga 104301
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 387 bits (195), Expect = e-104 Identities = 244/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135963 ataagatccttccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 135904 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135903 ttcaaacgaagaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 135844 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 135843 taagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaatag 135784 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135783 gtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 135725 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 135724 aaacatcttagtagccaga 135706 Score = 387 bits (195), Expect = e-104 Identities = 244/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 105946 ataagatccttccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 106005 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106006 ttcaaacgaagaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 106065 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 106066 taagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaatag 106125 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106126 gtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 106184 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 106185 aaacatcttagtagccaga 106203
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 387 bits (195), Expect = e-104 Identities = 244/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 136239 ataagatccttccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 136180 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 136179 ttcaaacgaagaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 136120 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 136119 taagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaatag 136060 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 136059 gtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 136001 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 136000 aaacatcttagtagccaga 135982 Score = 387 bits (195), Expect = e-104 Identities = 244/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 106168 ataagatccttccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 106227 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106228 ttcaaacgaagaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 106287 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 106288 taagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaatag 106347 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106348 gtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 106406 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 106407 aaacatcttagtagccaga 106425
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 387 bits (195), Expect = e-104 Identities = 244/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||| Sbjct: 132827 ataagatccatccatttagcagcaccttaggatggcatagccttaaaattaagggcgagg 132768 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132767 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 132708 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 132707 taagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 132648 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132647 gttaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 132589 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 132588 aaacatcttagtagccaga 132570 Score = 387 bits (195), Expect = e-104 Identities = 244/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||| Sbjct: 104042 ataagatccatccatttagcagcaccttaggatggcatagccttaaaattaagggcgagg 104101 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104102 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 104161 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 104162 taagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 104221 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104222 gttaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 104280 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 104281 aaacatcttagtagccaga 104299
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 379 bits (191), Expect = e-102 Identities = 197/199 (98%) Strand = Plus / Minus Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 923 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 922 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 863 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 gtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 803 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 802 aaacatcttagtagccaga 784
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 379 bits (191), Expect = e-102 Identities = 243/259 (93%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| | || ||||||| Sbjct: 131726 ataagatccatccatttagcagcaccttaggatggcatagccttaaaatgaagggcgagg 131667 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131666 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 131607 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131606 taagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 131547 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131546 gttaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 131488 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 131487 aaacatcttagtagccaga 131469 Score = 379 bits (191), Expect = e-102 Identities = 243/259 (93%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| | || ||||||| Sbjct: 102909 ataagatccatccatttagcagcaccttaggatggcatagccttaaaatgaagggcgagg 102968 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 102969 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 103028 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 103029 taagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatag 103088 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103089 gttaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 103147 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 103148 aaacatcttagtagccaga 103166
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 379 bits (191), Expect = e-102 Identities = 243/259 (93%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| ||||||||| |||||||||||||||| || || ||||||| Sbjct: 139772 ataagatccttccatttagcagcaccttatgatggcatagccttaaagtgaagggcgagg 139713 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 139712 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 139653 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 139652 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaatag 139593 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139592 gtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 139534 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 139533 aaacatcttagtagccaga 139515 Score = 379 bits (191), Expect = e-102 Identities = 243/259 (93%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| ||||||||| |||||||||||||||| || || ||||||| Sbjct: 109527 ataagatccttccatttagcagcaccttatgatggcatagccttaaagtgaagggcgagg 109586 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 109587 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 109646 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 109647 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaatag 109706 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 109707 gtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 109765 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 109766 aaacatcttagtagccaga 109784
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 373 bits (188), Expect = e-100 Identities = 246/264 (93%), Gaps = 6/264 (2%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-----gttaatgg 56 |||||||| |||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 140424 ataagatccttccatttagcagcaccttaggatggcatagccttaaattaaagttaaggg 140365 Query: 57 cgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaaggg 116 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 140364 cgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaaggg 140305 Query: 117 cgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccca 176 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140304 cgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccg 140245 Query: 177 aataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcg 236 |||||||||||| || ||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 140244 aataggtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcg 140186 Query: 237 aactgaaacatcttagtagccaga 260 |||||||||||||||||||||||| Sbjct: 140185 aactgaaacatcttagtagccaga 140162 Score = 373 bits (188), Expect = e-100 Identities = 246/264 (93%), Gaps = 6/264 (2%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-----gttaatgg 56 |||||||| |||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 109636 ataagatccttccatttagcagcaccttaggatggcatagccttaaattaaagttaaggg 109695 Query: 57 cgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaaggg 116 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 109696 cgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaaggg 109755 Query: 117 cgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccca 176 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109756 cgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccg 109815 Query: 177 aataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcg 236 |||||||||||| || ||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 109816 aataggtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcg 109874 Query: 237 aactgaaacatcttagtagccaga 260 |||||||||||||||||||||||| Sbjct: 109875 aactgaaacatcttagtagccaga 109898
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 367 bits (185), Expect = 1e-98 Identities = 194/197 (98%) Strand = Plus / Plus Query: 64 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 123 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 60 Query: 124 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 Query: 184 caaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 243 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 180 Query: 244 acatcttagtagccaga 260 ||||||||||||||||| Sbjct: 181 acatcttagtagccaga 197
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 367 bits (185), Expect = 1e-98 Identities = 194/197 (98%) Strand = Plus / Plus Query: 64 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 123 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 61 Query: 124 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 121 Query: 184 caaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 243 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 181 Query: 244 acatcttagtagccaga 260 ||||||||||||||||| Sbjct: 182 acatcttagtagccaga 198
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 367 bits (185), Expect = 1e-98 Identities = 194/197 (98%) Strand = Plus / Plus Query: 64 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 123 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 60 Query: 124 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 Query: 184 caaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 243 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 180 Query: 244 acatcttagtagccaga 260 ||||||||||||||||| Sbjct: 181 acatcttagtagccaga 197
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 367 bits (185), Expect = 1e-98 Identities = 194/197 (98%) Strand = Plus / Plus Query: 64 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 123 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 60 Query: 124 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 Query: 184 caaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 243 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 180 Query: 244 acatcttagtagccaga 260 ||||||||||||||||| Sbjct: 181 acatcttagtagccaga 197
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 365 bits (184), Expect = 5e-98 Identities = 245/264 (92%), Gaps = 6/264 (2%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttagg-----atggcatagccttaacgttaatgg 56 |||||||| |||||||||| ||||||||||| ||||||||| | ||||||||| || Sbjct: 142172 ataagatccttccatttagcagcaccttaggttagtatggcatagacctaacgttaacgg 142113 Query: 57 cgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaaggg 116 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 142112 cgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaaggg 142053 Query: 117 cgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccca 176 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142052 cgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccg 141993 Query: 177 aataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcg 236 ||| |||||||| || ||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 141992 aatgggtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcg 141934 Query: 237 aactgaaacatcttagtagccaga 260 |||||||||||||||||||||||| Sbjct: 141933 aactgaaacatcttagtagccaga 141910 Score = 365 bits (184), Expect = 5e-98 Identities = 245/264 (92%), Gaps = 6/264 (2%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttagg-----atggcatagccttaacgttaatgg 56 |||||||| |||||||||| ||||||||||| ||||||||| | ||||||||| || Sbjct: 111485 ataagatccttccatttagcagcaccttaggttagtatggcatagacctaacgttaacgg 111544 Query: 57 cgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaaggg 116 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 111545 cgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaaggg 111604 Query: 117 cgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccca 176 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111605 cgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccg 111664 Query: 177 aataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcg 236 ||| |||||||| || ||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 111665 aatgggtcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcg 111723 Query: 237 aactgaaacatcttagtagccaga 260 |||||||||||||||||||||||| Sbjct: 111724 aactgaaacatcttagtagccaga 111747
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 361 bits (182), Expect = 7e-97 Identities = 191/194 (98%) Strand = Plus / Plus Query: 67 aagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagc 126 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 aagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagc 60 Query: 127 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 120 Query: 187 ccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 246 || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 180 Query: 247 tcttagtagccaga 260 |||||||||||||| Sbjct: 181 tcttagtagccaga 194
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 361 bits (182), Expect = 7e-97 Identities = 198/202 (98%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 60 ggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag-ggcg 118 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1 ggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagaggcg 60 Query: 119 tagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaa 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaa 120 Query: 179 taggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaa 238 |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 121 taggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaa 180 Query: 239 ctgaaacatcttagtagccaga 260 |||||||||||||||||||||| Sbjct: 181 ctgaaacatcttagtagccaga 202
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 136360 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 136301 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 136300 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 136241 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 136240 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 136181 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 136180 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 136122 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 136121 gaaacatcttagtagccaga 136102 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 106270 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 106329 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106330 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 106389 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106390 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 106449 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 106450 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 106508 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 106509 gaaacatcttagtagccaga 106528
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 136998 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 136939 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 136938 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 136879 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 136878 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 136819 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 136818 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 136760 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 136759 gaaacatcttagtagccaga 136740 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 106559 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 106618 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106619 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 106678 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106679 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 106738 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 106739 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 106797 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 106798 gaaacatcttagtagccaga 106817
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 1464 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 1523 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1524 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 1583 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1584 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 1643 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1644 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 1702 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 1703 gaaacatcttagtagccaga 1722
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 135606 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 135547 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135546 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 135487 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135486 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 135427 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 135426 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 135368 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 135367 gaaacatcttagtagccaga 135348 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 105430 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 105489 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 105490 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 105549 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105550 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 105609 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 105610 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 105668 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 105669 gaaacatcttagtagccaga 105688
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 135741 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 135682 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135681 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 135622 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135621 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 135562 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 135561 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 135503 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 135502 gaaacatcttagtagccaga 135483 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 105602 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 105661 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 105662 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 105721 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105722 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 105781 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 105782 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 105840 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 105841 gaaacatcttagtagccaga 105860
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 135739 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 135680 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135679 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 135620 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135619 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 135560 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 135559 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 135501 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 135500 gaaacatcttagtagccaga 135481 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 105599 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 105658 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 105659 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 105718 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105719 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 105778 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 105779 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 105837 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 105838 gaaacatcttagtagccaga 105857
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 135651 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 135592 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135591 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 135532 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135531 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 135472 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 135471 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 135413 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 135412 gaaacatcttagtagccaga 135393 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 105477 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 105536 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 105537 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 105596 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105597 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 105656 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 105657 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 105715 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 105716 gaaacatcttagtagccaga 105735
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 136358 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 136299 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 136298 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 136239 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 136238 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 136179 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 136178 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 136120 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 136119 gaaacatcttagtagccaga 136100 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 106268 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 106327 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106328 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 106387 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106388 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 106447 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 106448 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 106506 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 106507 gaaacatcttagtagccaga 106526
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 135618 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 135559 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135558 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 135499 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135498 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 135439 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 135438 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 135380 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 135379 gaaacatcttagtagccaga 135360 Score = 357 bits (180), Expect = 1e-95 Identities = 242/260 (93%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 105444 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 105503 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 105504 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 105563 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105564 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 105623 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 105624 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 105682 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 105683 gaaacatcttagtagccaga 105702
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 353 bits (178), Expect = 2e-94 Identities = 233/250 (93%), Gaps = 1/250 (0%) Strand = Plus / Minus Query: 11 ttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttcaaaaga 70 |||||| ||| |||||||||||||||||||||||| | ||||| ||||||||||||| || Sbjct: 130585 ttccatctagcagcaccttaggatggcatagccttcaagttaagggcgaggttcaaacga 130526 Query: 71 ggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacg 130 |||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 130525 ggaaaggcttatggtggatacctaggcacccagagacgaggaggggcgtagtaagcgacg 130466 Query: 131 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccct 190 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 130465 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 130406 Query: 191 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 250 | |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 130405 tcgaact-actgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 130347 Query: 251 agtagccaga 260 |||||||||| Sbjct: 130346 agtagccaga 130337 Score = 353 bits (178), Expect = 2e-94 Identities = 233/250 (93%), Gaps = 1/250 (0%) Strand = Plus / Plus Query: 11 ttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttcaaaaga 70 |||||| ||| |||||||||||||||||||||||| | ||||| ||||||||||||| || Sbjct: 101871 ttccatctagcagcaccttaggatggcatagccttcaagttaagggcgaggttcaaacga 101930 Query: 71 ggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacg 130 |||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 101931 ggaaaggcttatggtggatacctaggcacccagagacgaggaggggcgtagtaagcgacg 101990 Query: 131 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccct 190 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 101991 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 102050 Query: 191 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 250 | |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 102051 tcgaact-actgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 102109 Query: 251 agtagccaga 260 |||||||||| Sbjct: 102110 agtagccaga 102119
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 349 bits (176), Expect = 3e-93 Identities = 241/260 (92%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 136089 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 136030 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 136029 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 135970 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 135969 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggggattcccgaata 135910 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 135909 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 135851 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 135850 gaaacatcttagtagccaga 135831 Score = 349 bits (176), Expect = 3e-93 Identities = 241/260 (92%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 106049 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 106108 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106109 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 106168 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 106169 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggggattcccgaata 106228 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 106229 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 106287 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 106288 gaaacatcttagtagccaga 106307
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 347 bits (175), Expect = 1e-92 Identities = 233/251 (92%), Gaps = 6/251 (2%) Strand = Plus / Plus Query: 10 tttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttcaaaag 69 |||||||||||||||||||||||||||||||||||| | ||| ||||||||||| | Sbjct: 86216 tttccatttagtagcaccttaggatggcatagccttga-----atgacgaggttcaaacg 86270 Query: 70 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 129 ||||| ||||| |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 86271 aggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtggtaagcgac 86330 Query: 130 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccc 189 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| Sbjct: 86331 gaaatgcttcggggagttgaaaatgagcatagatccggagattcccgaataggttaaccc 86390 Query: 190 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 249 ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 86391 ttttaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 86449 Query: 250 tagtagccaga 260 ||||||||||| Sbjct: 86450 tagtagccaga 86460
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 345 bits (174), Expect = 4e-92 Identities = 229/246 (93%), Gaps = 1/246 (0%) Strand = Plus / Minus Query: 15 atttagtagcaccttaggatggcatagccttaacgttaatggcgaggttcaaaagaggaa 74 |||||| ||||||||||||||||||| |||||| ||||| ||||||||||||| |||||| Sbjct: 131837 atttagcagcaccttaggatggcataaccttaaagttaagggcgaggttcaaacgaggaa 131778 Query: 75 aggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 134 |||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 131777 aggcttacggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaat 131718 Query: 135 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaa 194 |||||||||||||||||||||||| |||||||||||||||| |||||||||||| || | Sbjct: 131717 gcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcga 131658 Query: 195 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 254 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131657 act-tctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 131599 Query: 255 gccaga 260 |||||| Sbjct: 131598 gccaga 131593 Score = 345 bits (174), Expect = 4e-92 Identities = 229/246 (93%), Gaps = 1/246 (0%) Strand = Plus / Plus Query: 15 atttagtagcaccttaggatggcatagccttaacgttaatggcgaggttcaaaagaggaa 74 |||||| ||||||||||||||||||| |||||| ||||| ||||||||||||| |||||| Sbjct: 101608 atttagcagcaccttaggatggcataaccttaaagttaagggcgaggttcaaacgaggaa 101667 Query: 75 aggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 134 |||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 101668 aggcttacggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaat 101727 Query: 135 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaa 194 |||||||||||||||||||||||| |||||||||||||||| |||||||||||| || | Sbjct: 101728 gcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcga 101787 Query: 195 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 254 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 101788 act-tctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 101846 Query: 255 gccaga 260 |||||| Sbjct: 101847 gccaga 101852
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 343 bits (173), Expect = 2e-91 Identities = 235/253 (92%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 40 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 99 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 100 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 159 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 160 gtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaata 219 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 220 gggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaact 278 Query: 241 gaaacatcttagt 253 ||||||||||||| Sbjct: 279 gaaacatcttagt 291
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 339 bits (171), Expect = 3e-90 Identities = 238/259 (91%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||| ||| ||| | ||||| ||||||| Sbjct: 4172 ataagatccttccatctagcagcaccttaggatggcctagacttcaagttaagggcgagg 4231 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4232 ttcaaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 4291 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 4292 taagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaatag 4351 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| ||||||||| || ||||||||||||||||||||||||||||| Sbjct: 4352 gtcaacctttcgaactg-ctgctgaattcacgagcaggcaagagacaacctggcgaactg 4410 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 4411 aaacatcttagtagccaga 4429
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 339 bits (171), Expect = 3e-90 Identities = 238/259 (91%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||| ||| ||| | ||||| ||||||| Sbjct: 23753 ataagatccttccatctagcagcaccttaggatggcctagacttcaagttaagggcgagg 23694 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 23693 ttcaaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 23634 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 23633 taagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaatag 23574 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| ||||||||| || ||||||||||||||||||||||||||||| Sbjct: 23573 gtcaacctttcgaactg-ctgctgaattcacgagcaggcaagagacaacctggcgaactg 23515 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 23514 aaacatcttagtagccaga 23496
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 339 bits (171), Expect = 3e-90 Identities = 238/259 (91%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||| ||| ||| | ||||| ||||||| Sbjct: 79829 ataagatccttccatctagcagcaccttaggatggcctagacttcaagttaagggcgagg 79770 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79769 ttcaaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 79710 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 79709 taagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaatag 79650 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| ||||||||| || ||||||||||||||||||||||||||||| Sbjct: 79649 gtcaacctttcgaactg-ctgctgaattcacgagcaggcaagagacaacctggcgaactg 79591 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 79590 aaacatcttagtagccaga 79572
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 333 bits (168), Expect = 2e-88 Identities = 239/260 (91%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 131930 ataagatccttccatctagcagcaccttaggatggcatagccttaaagttaagggcgagg 131871 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 131870 ttcaaacgaagaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 131811 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaata 180 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||| Sbjct: 131810 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatata 131751 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 |||||||| || ||||| |||||||||||| | |||||||||||||||||||| ||||| Sbjct: 131750 ggtcaacctttcgaactg-ctgctgaatccacgggcaggcaagagacaacctggtgaact 131692 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 131691 gaaacatcttagtagccaga 131672 Score = 333 bits (168), Expect = 2e-88 Identities = 239/260 (91%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 103464 ataagatccttccatctagcagcaccttaggatggcatagccttaaagttaagggcgagg 103523 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 103524 ttcaaacgaagaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 103583 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaata 180 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||| Sbjct: 103584 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatata 103643 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 |||||||| || ||||| |||||||||||| | |||||||||||||||||||| ||||| Sbjct: 103644 ggtcaacctttcgaactg-ctgctgaatccacgggcaggcaagagacaacctggtgaact 103702 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 103703 gaaacatcttagtagccaga 103722
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 321 bits (162), Expect = 6e-85 Identities = 196/206 (95%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 ggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaag 61 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcc 121 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||||||||| || |||||| |||||||||||||| |||||||||||||||||||| Sbjct: 122 cgaataggtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctgg 180 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||| ||||| Sbjct: 181 cgaactgaaacatcttagtaaccaga 206
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 321 bits (162), Expect = 6e-85 Identities = 196/206 (95%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 ggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaag 61 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcc 121 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||||||||| || |||||| |||||||||||||| |||||||||||||||||||| Sbjct: 122 cgaataggtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctgg 180 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||| ||||| Sbjct: 181 cgaactgaaacatcttagtaaccaga 206
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 321 bits (162), Expect = 6e-85 Identities = 196/206 (95%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 ggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaag 61 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcc 121 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||||||||| || |||||| |||||||||||||| |||||||||||||||||||| Sbjct: 122 cgaataggtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctgg 180 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||| ||||| Sbjct: 181 cgaactgaaacatcttagtaaccaga 206
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 321 bits (162), Expect = 6e-85 Identities = 196/206 (95%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 ggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaag 61 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcc 121 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||||||||| || |||||| |||||||||||||| |||||||||||||||||||| Sbjct: 122 cgaataggtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctgg 180 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||| ||||| Sbjct: 181 cgaactgaaacatcttagtaaccaga 206
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 321 bits (162), Expect = 6e-85 Identities = 196/206 (95%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 ggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaag 61 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcc 121 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||||||||| || |||||| |||||||||||||| |||||||||||||||||||| Sbjct: 122 cgaataggtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctgg 180 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||| ||||| Sbjct: 181 cgaactgaaacatcttagtaaccaga 206
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 315 bits (159), Expect = 4e-83 Identities = 229/251 (91%), Gaps = 6/251 (2%) Strand = Plus / Plus Query: 10 tttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttcaaaag 69 ||||||||| |||||||||||||||||||||||||| | ||| ||||||||||| | Sbjct: 88302 tttccatttggtagcaccttaggatggcatagccttga-----atgacgaggttcaaacg 88356 Query: 70 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 129 ||||| ||||| |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 88357 aggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtggtaagcgac 88416 Query: 130 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccc 189 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| Sbjct: 88417 gaaatgcttcggggagttgaaaattagcatagatccggagattcccgaataggttaacct 88476 Query: 190 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 249 ||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 88477 ttttcactg-ctgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatct 88535 Query: 250 tagtagccaga 260 ||||||||||| Sbjct: 88536 tagtagccaga 88546
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 313 bits (158), Expect = 2e-82 Identities = 195/206 (94%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 ggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaag 61 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggggttgaaaataagcgtagatccggagattcc 121 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||||||||| || |||||| |||||||||||||| |||||||||||||||||||| Sbjct: 122 cgaataggtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctgg 180 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||| ||||| Sbjct: 181 cgaactgaaacatcttagtaaccaga 206
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 311 bits (157), Expect = 6e-82 Identities = 197/209 (94%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 49 gttaatggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacg 108 ||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 139516 gttaagggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacg 139457 Query: 109 aggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgga 168 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139456 aggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgga 139397 Query: 169 gattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagaca 228 ||||||| |||||||||||| || ||||| |||||||||||||| |||| ||||||||| Sbjct: 139396 gattcccgaataggtcaacctttcgaactg-ctgctgaatccatgggcagacaagagaca 139338 Query: 229 acctggcgaactgaaacatcttagtagcc 257 ||||||||||||||||||||||||||||| Sbjct: 139337 acctggcgaactgaaacatcttagtagcc 139309 Score = 311 bits (157), Expect = 6e-82 Identities = 197/209 (94%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 49 gttaatggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacg 108 ||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 109581 gttaagggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacg 109640 Query: 109 aggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgga 168 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 109641 aggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccgga 109700 Query: 169 gattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagaca 228 ||||||| |||||||||||| || ||||| |||||||||||||| |||| ||||||||| Sbjct: 109701 gattcccgaataggtcaacctttcgaactg-ctgctgaatccatgggcagacaagagaca 109759 Query: 229 acctggcgaactgaaacatcttagtagcc 257 ||||||||||||||||||||||||||||| Sbjct: 109760 acctggcgaactgaaacatcttagtagcc 109788 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 14 catttagtagcaccttaggatggcatagccttaa 47 ||||||| |||||||||||||||||||||||||| Sbjct: 139577 catttagcagcaccttaggatggcatagccttaa 139544 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 14 catttagtagcaccttaggatggcatagccttaa 47 ||||||| |||||||||||||||||||||||||| Sbjct: 109520 catttagcagcaccttaggatggcatagccttaa 109553
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 309 bits (156), Expect = 2e-81 Identities = 229/252 (90%), Gaps = 6/252 (2%) Strand = Plus / Plus Query: 14 catttagtagcaccttaggatggcatagccttaacgttaatg-----gcgaggttcaaaa 68 ||||||| ||||||||||||||||||| |||||| ||||| | |||||||||||| Sbjct: 46200 catttagcagcaccttaggatggcataaccttaaagttaaggtaagggcgaggttcaaac 46259 Query: 69 gaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcga 128 |||||||||||| ||||||||||||||||||||||||||| |||||||||| || ||| Sbjct: 46260 gaggaaaggcttatggtggatacctaggcacccagagacgaagaagggcgtattaatcga 46319 Query: 129 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 46320 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacc 46379 Query: 189 ctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 248 || ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 46380 tttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatc 46438 Query: 249 ttagtagccaga 260 ||| |||||||| Sbjct: 46439 ttactagccaga 46450
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 309 bits (156), Expect = 2e-81 Identities = 237/260 (91%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 2541 ataagatccttccatctagcagcaccttaggatg-catagccttaaagttaagggcgagg 2599 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2600 ttcaaacgaagaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 2659 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaata 180 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||| Sbjct: 2660 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatata 2719 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 |||||||| || ||||| |||||||||||| | |||||||||||||||| ||| ||||| Sbjct: 2720 ggtcaacctttcgaactg-ctgctgaatccacgggcaggcaagagacaacttggtgaact 2778 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 2779 gaaacatcttagtagccaga 2798
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 309 bits (156), Expect = 2e-81 Identities = 237/260 (91%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 796 ataagatccttccatctagcagcaccttaggatg-catagccttaaagttaagggcgagg 854 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 855 ttcaaacgaagaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 914 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaata 180 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||| Sbjct: 915 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatata 974 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 |||||||| || ||||| |||||||||||| | |||||||||||||||| ||| ||||| Sbjct: 975 ggtcaacctttcgaactg-ctgctgaatccacgggcaggcaagagacaacttggtgaact 1033 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 1034 gaaacatcttagtagccaga 1053
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 307 bits (155), Expect = 9e-81 Identities = 234/259 (90%), Gaps = 6/259 (2%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||||||| || | | ||||||| Sbjct: 4446 ataagatccttccatctagcagcaccttaggatggcatagagttgaag-----ggcgagg 4500 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4501 ttcaaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 4560 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 4561 taagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaatag 4620 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| ||||||||| || ||||||||||||||||||||||||||||| Sbjct: 4621 gtcaacctttcgaactg-ctgctgaattcacgagcaggcaagagacaacctggcgaactg 4679 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 4680 aaacatcttagtagccaga 4698
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 307 bits (155), Expect = 9e-81 Identities = 234/259 (90%), Gaps = 6/259 (2%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||||||| || | | ||||||| Sbjct: 4446 ataagatccttccatctagcagcaccttaggatggcatagagttgaag-----ggcgagg 4500 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4501 ttcaaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 4560 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 4561 taagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaatag 4620 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || ||||| ||||||||| || ||||||||||||||||||||||||||||| Sbjct: 4621 gtcaacctttcgaactg-ctgctgaattcacgagcaggcaagagacaacctggcgaactg 4679 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 4680 aaacatcttagtagccaga 4698
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 305 bits (154), Expect = 4e-80 Identities = 188/198 (94%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 63 tcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagc 122 ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagt 60 Query: 123 aagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 182 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 61 aagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaatagg 120 Query: 183 tcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactga 242 | |||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 121 ttaaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactga 179 Query: 243 aacatcttagtagccaga 260 |||||||||||||||||| Sbjct: 180 aacatcttagtagccaga 197
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 301 bits (152), Expect = 6e-79 Identities = 227/248 (91%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 14 catttagtagcaccttaggatggcatagcc-ttaacgttaatggcgaggttcaaaagagg 72 ||||||| |||||||||| |||||||| || |||| ||||| ||||||||||||| |||| Sbjct: 449 catttagcagcaccttag-atggcataacccttaaagttaagggcgaggttcaaacgagg 507 Query: 73 aaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaa 132 |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 508 aaaggcttacggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaa 567 Query: 133 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacccttt 192 ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||| || Sbjct: 568 atgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttc 627 Query: 193 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 252 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 628 gaact-tctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttag 686 Query: 253 tagccaga 260 |||||||| Sbjct: 687 tagccaga 694
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 299 bits (151), Expect = 2e-78 Identities = 188/199 (94%), Gaps = 1/199 (0%) Strand = Plus / Plus Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 60 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 61 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaatag 120 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || |||||| |||||||||||||| |||||||||||||||||| ||||||| Sbjct: 121 gtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctaacgaactg 179 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 180 aaacatcttagtagccaga 198
>gb|DQ001732.1| Lolium perenne voucher P.M. McNutt 018 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2589 Score = 295 bits (149), Expect = 4e-77 Identities = 152/153 (99%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2437 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 2496 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2497 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 2556 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 ||||||||||||||||||||||||||||||||| Sbjct: 2557 caagcgacgaaatgcttcggggagttgaaaata 2589
>gb|DQ001731.1| Secale cereale voucher P.M. McNutt 006 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2582 Score = 295 bits (149), Expect = 4e-77 Identities = 152/153 (99%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2430 ataagatccttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 2489 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2490 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 2549 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 ||||||||||||||||||||||||||||||||| Sbjct: 2550 caagcgacgaaatgcttcggggagttgaaaata 2582
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 291 bits (147), Expect = 6e-76 Identities = 232/255 (90%), Gaps = 4/255 (1%) Strand = Plus / Minus Query: 6 gatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttca 65 |||| |||||||||| ||||||||| |||| | |||||| | ||||| |||||| |||| Sbjct: 142931 gatccttccatttagcagcaccttatgatg-cggagccttcaagttaagggcgag-ttca 142874 Query: 66 aaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaag 125 || |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 142873 aacgaggaaaggcttacggtg-atacctaggcacccagagacgaggaagggcgtagtaag 142815 Query: 126 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 185 |||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| Sbjct: 142814 cgacgaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggtca 142755 Query: 186 accctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 245 ||| || ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 142754 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 142696 Query: 246 atcttagtagccaga 260 ||||||||||||||| Sbjct: 142695 atcttagtagccaga 142681 Score = 291 bits (147), Expect = 6e-76 Identities = 232/255 (90%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 6 gatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttca 65 |||| |||||||||| ||||||||| |||| | |||||| | ||||| |||||| |||| Sbjct: 110397 gatccttccatttagcagcaccttatgatg-cggagccttcaagttaagggcgag-ttca 110454 Query: 66 aaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaag 125 || |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 110455 aacgaggaaaggcttacggtg-atacctaggcacccagagacgaggaagggcgtagtaag 110513 Query: 126 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 185 |||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| Sbjct: 110514 cgacgaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggtca 110573 Query: 186 accctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 245 ||| || ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110574 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 110632 Query: 246 atcttagtagccaga 260 ||||||||||||||| Sbjct: 110633 atcttagtagccaga 110647
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 291 bits (147), Expect = 6e-76 Identities = 196/211 (92%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 50 ttaatggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacga 109 |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 2033 ttaatggcgaggttcaaacgaataagggcttatggtggatacctaggcacccagagacga 2092 Query: 110 ggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 169 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2093 ggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggag 2152 Query: 170 attcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaa 229 |||||| ||||||| |||| ||| ||||| ||||||||| ||| ||||||||||||||| Sbjct: 2153 attcccgaataggttaaccttttgaactg-ctgctgaattcataggcaggcaagagacaa 2211 Query: 230 cctggcgaactgaaacatcttagtagccaga 260 ||||||||||||||||||||||||||||||| Sbjct: 2212 cctggcgaactgaaacatcttagtagccaga 2242
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 291 bits (147), Expect = 6e-76 Identities = 196/211 (92%), Gaps = 1/211 (0%) Strand = Plus / Minus Query: 50 ttaatggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacga 109 |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 118160 ttaatggcgaggttcaaacgaataagggcttatggtggatacctaggcacccagagacga 118101 Query: 110 ggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 169 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 118100 ggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggag 118041 Query: 170 attcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaa 229 |||||| ||||||| |||| ||| ||||| ||||||||| ||| ||||||||||||||| Sbjct: 118040 attcccgaataggttaaccttttgaactg-ctgctgaattcataggcaggcaagagacaa 117982 Query: 230 cctggcgaactgaaacatcttagtagccaga 260 ||||||||||||||||||||||||||||||| Sbjct: 117981 cctggcgaactgaaacatcttagtagccaga 117951 Score = 291 bits (147), Expect = 6e-76 Identities = 196/211 (92%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 50 ttaatggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacga 109 |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 89942 ttaatggcgaggttcaaacgaataagggcttatggtggatacctaggcacccagagacga 90001 Query: 110 ggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 169 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 90002 ggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggag 90061 Query: 170 attcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaa 229 |||||| ||||||| |||| ||| ||||| ||||||||| ||| ||||||||||||||| Sbjct: 90062 attcccgaataggttaaccttttgaactg-ctgctgaattcataggcaggcaagagacaa 90120 Query: 230 cctggcgaactgaaacatcttagtagccaga 260 ||||||||||||||||||||||||||||||| Sbjct: 90121 cctggcgaactgaaacatcttagtagccaga 90151
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 289 bits (146), Expect = 2e-75 Identities = 152/154 (98%) Strand = Plus / Plus Query: 107 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 167 gagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagaga 226 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 227 caacctggcgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccaga 154
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 287 bits (145), Expect = 9e-75 Identities = 187/199 (93%), Gaps = 4/199 (2%) Strand = Plus / Plus Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 1 ttcaaacgaggaaaggcttacgg---atacctaggcacccagagacgaggaagggcgtag 57 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 58 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaatag 117 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 ||||||| || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118 gtcaacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactg 176 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 177 aaacatcttagtagccaga 195
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 285 bits (144), Expect = 3e-74 Identities = 209/228 (91%), Gaps = 2/228 (0%) Strand = Plus / Minus Query: 33 atggcatagccttaacgttaatggcgaggttcaaaagaggaaaggcttgcggtggatacc 92 ||||||||||||| | |||||||||||||||||| || || ||||| ||||||||||| Sbjct: 116236 atggcatagcctttaa-ttaatggcgaggttcaaacgaaaaagggcttacggtggatacc 116178 Query: 93 taggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaa 152 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 116177 taggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaa 116118 Query: 153 taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgctgaatccat 212 |||| |||||||||||||||||| ||||||| |||| || |||||| ||||||||| ||| Sbjct: 116117 taagtatagatccggagattcccgaataggttaacctttgaaactg-ctgctgaattcat 116059 Query: 213 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 116058 aggcagacaagagacaacctggcgaactgaaacatcttagtagccaga 116011 Score = 285 bits (144), Expect = 3e-74 Identities = 209/228 (91%), Gaps = 2/228 (0%) Strand = Plus / Plus Query: 33 atggcatagccttaacgttaatggcgaggttcaaaagaggaaaggcttgcggtggatacc 92 ||||||||||||| | |||||||||||||||||| || || ||||| ||||||||||| Sbjct: 85884 atggcatagcctttaa-ttaatggcgaggttcaaacgaaaaagggcttacggtggatacc 85942 Query: 93 taggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaa 152 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 85943 taggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaa 86002 Query: 153 taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgctgaatccat 212 |||| |||||||||||||||||| ||||||| |||| || |||||| ||||||||| ||| Sbjct: 86003 taagtatagatccggagattcccgaataggttaacctttgaaactg-ctgctgaattcat 86061 Query: 213 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86062 aggcagacaagagacaacctggcgaactgaaacatcttagtagccaga 86109
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 285 bits (144), Expect = 3e-74 Identities = 197/211 (93%), Gaps = 3/211 (1%) Strand = Plus / Plus Query: 49 gttaatggcgaggttcaaa-agaggaaaggcttgc-ggtggatacctaggcacccagaga 106 ||||| ||||||||||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 35 gttaagggcgaggttcaaacngaggaaaggcttacnggtggatacctaggcacccagaga 94 Query: 107 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 166 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 154 Query: 167 gagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagaga 226 ||||||||| |||||||||||| || ||||| |||||||||||||| |||| ||||||| Sbjct: 155 gagattcccgaataggtcaacctttcgaactg-ctgctgaatccatgggcagacaagaga 213 Query: 227 caacctggcgaactgaaacatcttagtagcc 257 ||||||||||||||||||||||||||||||| Sbjct: 214 caacctggcgaactgaaacatcttagtagcc 244
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 285 bits (144), Expect = 3e-74 Identities = 187/200 (93%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gttcaaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgta 60 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 61 gcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaatg 120 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 ||| |||| ||| ||||| ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 121 ggttaaccttttgaactg-ctgctgaattcataggcaggcaagagacaacctggcgaact 179 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 180 gaaacatcttagtagccaga 199
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 281 bits (142), Expect = 5e-73 Identities = 191/206 (92%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 52692 ggcgaggttcaaacgagaaaaggcttacggtggatacctaggcacccagagacgaggaag 52633 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 | |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52632 gatgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 52573 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||| ||||| ||| ||||| |||||||||||||| |||| ||||||| ||||||| Sbjct: 52572 cgaatagggcaaccttttgaactg-ctgctgaatccatgggcagacaagagataacctgg 52514 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||| Sbjct: 52513 cgaactgaaacatcttagtagccaga 52488 Score = 281 bits (142), Expect = 5e-73 Identities = 191/206 (92%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 37136 ggcgaggttcaaacgagaaaaggcttacggtggatacctaggcacccagagacgaggaag 37195 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 | |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37196 gatgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 37255 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||| ||||| ||| ||||| |||||||||||||| |||| ||||||| ||||||| Sbjct: 37256 cgaatagggcaaccttttgaactg-ctgctgaatccatgggcagacaagagataacctgg 37314 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||| Sbjct: 37315 cgaactgaaacatcttagtagccaga 37340 Score = 44.1 bits (22), Expect = 0.22 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 2 ataagatctttccatt-tagtagcaccttaggatggcatagc 42 |||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 52777 ataagatccatccattatagcagcaccttaggatggcatagc 52736 Score = 44.1 bits (22), Expect = 0.22 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 2 ataagatctttccatt-tagtagcaccttaggatggcatagc 42 |||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 37051 ataagatccatccattatagcagcaccttaggatggcatagc 37092
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 281 bits (142), Expect = 5e-73 Identities = 192/206 (93%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1761 ggcgaggttcaaacgaggaaagggttacggtggatacctaggcacccagagacgaggaag 1820 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1821 ggcgtagtaatc-acgaaatgcttcggggagttgaaaataagcatagatccggagattcc 1879 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||| ||||| || ||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1880 cgaatagggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctgg 1938 Query: 235 cgaactgaaacatcttagtagccaga 260 ||||||||| |||||||||||||||| Sbjct: 1939 cgaactgaaccatcttagtagccaga 1964
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 281 bits (142), Expect = 5e-73 Identities = 191/206 (92%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 ggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaag 61 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 |||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 62 ggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccggagattcc 121 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||| ||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 122 cgaatagggcaacctttcgaact-tctgctgaatccatgggcaggcaagagacaacctgg 180 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||| Sbjct: 181 cgaactgaaacatcttagtagccaga 206
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 281 bits (142), Expect = 5e-73 Identities = 191/206 (92%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 ggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaag 61 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 |||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 62 ggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccggagattcc 121 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||| ||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 122 cgaatagggcaacctttcgaact-tctgctgaatccatgggcaggcaagagacaacctgg 180 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||| Sbjct: 181 cgaactgaaacatcttagtagccaga 206
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 281 bits (142), Expect = 5e-73 Identities = 191/206 (92%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4064 ggcgaggttcaaacgagaaaaggcttacggtggatacctaggcacccagagacgaggaag 4123 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 | |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4124 gatgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 4183 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||| ||||| ||| ||||| |||||||||||||| |||| ||||||| ||||||| Sbjct: 4184 cgaatagggcaaccttttgaactg-ctgctgaatccatgggcagacaagagataacctgg 4242 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||| Sbjct: 4243 cgaactgaaacatcttagtagccaga 4268 Score = 44.1 bits (22), Expect = 0.22 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 2 ataagatctttccatt-tagtagcaccttaggatggcatagc 42 |||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 3979 ataagatccatccattatagcagcaccttaggatggcatagc 4020
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 278 bits (140), Expect = 8e-72 Identities = 216/240 (90%), Gaps = 6/240 (2%) Strand = Plus / Minus Query: 21 tagcaccttaggatggcatagccttaacgttaatggcgaggttcaaaagaggaaaggctt 80 ||||||||||| |||||||||||| | ||||||||||||||| || |||||||| Sbjct: 128481 tagcaccttagaatggcatagcct-----tccatggcgaggttcaaacgaataaaggctt 128427 Query: 81 gcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcg 140 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 128426 acggtggatacctaggcactcagagacgaggaagggcgtagcaatcgacgaaatgcttcg 128367 Query: 141 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcc 200 ||||| |||||| |||||||||||||||||||||| ||||||| |||| ||| ||||| | Sbjct: 128366 gggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactg-c 128308 Query: 201 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128307 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 128248 Score = 278 bits (140), Expect = 8e-72 Identities = 216/240 (90%), Gaps = 6/240 (2%) Strand = Plus / Plus Query: 21 tagcaccttaggatggcatagccttaacgttaatggcgaggttcaaaagaggaaaggctt 80 ||||||||||| |||||||||||| | ||||||||||||||| || |||||||| Sbjct: 94966 tagcaccttagaatggcatagcct-----tccatggcgaggttcaaacgaataaaggctt 95020 Query: 81 gcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcg 140 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 95021 acggtggatacctaggcactcagagacgaggaagggcgtagcaatcgacgaaatgcttcg 95080 Query: 141 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcc 200 ||||| |||||| |||||||||||||||||||||| ||||||| |||| ||| ||||| | Sbjct: 95081 gggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactg-c 95139 Query: 201 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 95199
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 276 bits (139), Expect = 3e-71 Identities = 192/207 (92%), Gaps = 2/207 (0%) Strand = Plus / Minus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 89888 ggcgaggttcaaacgaggaaaggcttacggtggataccaaggcacccagagacgaggaag 89829 Query: 115 ggcgtagcaagcgacg-aaatgcttcggggagttgaaaataagcatagatccggagattc 173 |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 89828 agcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattc 89769 Query: 174 ccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctg 233 | ||||||| |||| ||| ||||| |||||||||||||| ||||||||||||||||||| Sbjct: 89768 cggaataggttaaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctg 89710 Query: 234 gcgaactgaaacatcttagtagccaga 260 |||||||||||||||||| |||||||| Sbjct: 89709 gcgaactgaaacatcttactagccaga 89683
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 276 bits (139), Expect = 3e-71 Identities = 192/207 (92%), Gaps = 2/207 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 382 ggcgaggttcaaacgaggaaaggcttacggtggataccaaggcacccagagacgaggaag 441 Query: 115 ggcgtagcaagcgacg-aaatgcttcggggagttgaaaataagcatagatccggagattc 173 |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 442 agcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattc 501 Query: 174 ccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctg 233 | ||||||| |||| ||| ||||| |||||||||||||| ||||||||||||||||||| Sbjct: 502 cggaataggttaaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctg 560 Query: 234 gcgaactgaaacatcttagtagccaga 260 |||||||||||||||||| |||||||| Sbjct: 561 gcgaactgaaacatcttactagccaga 587
>emb|X00012.1|CHSORN1 Spirodela oligorhiza chloroplast 5' end of gene for 23S rRNA Length = 200 Score = 274 bits (138), Expect = 1e-70 Identities = 163/170 (95%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 15 atttagtagcaccttaggatggcatagccttaac-gttaatggcgaggttcaaaagagga 73 |||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 31 atttagcagcaccttaggatggcatagccttaacagttaatggcgaggttcaaacgagga 90 Query: 74 aaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaa 133 ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 91 aaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaa 150 Query: 134 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 183 ||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 151 tgcttcgtggagttgaaaataagcatagatccggagattcccgaataggt 200
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 270 bits (136), Expect = 2e-69 Identities = 167/176 (94%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 82 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 64 Query: 142 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcct 201 |||| |||||||||| |||||||||||||||||| ||||||| |||| ||||||||| || Sbjct: 65 ggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactg-ct 123 Query: 202 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 257 ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 124 gctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagcc 179
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 270 bits (136), Expect = 2e-69 Identities = 167/176 (94%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 85 tggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgggga 144 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcgggga 60 Query: 145 gttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 ||||||||||||| ||||||||||||||||| |||||||||||| || |||||| |||| Sbjct: 61 gttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg-ctgcc 119 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 120 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 175
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 268 bits (135), Expect = 8e-69 Identities = 187/203 (92%), Gaps = 1/203 (0%) Strand = Plus / Plus Query: 58 gaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggc 117 |||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3887 gaggttcaaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggc 3946 Query: 118 gtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa 177 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| | Sbjct: 3947 gtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccga 4006 Query: 178 ataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 237 |||||| |||| ||| ||||| ||||||||| || || | |||||||||||| |||||| Sbjct: 4007 ataggttaaccttttgaactg-ctgctgaattcacaagtaagcaagagacaacttggcga 4065 Query: 238 actgaaacatcttagtagccaga 260 ||||||||||||||||||||||| Sbjct: 4066 actgaaacatcttagtagccaga 4088
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 268 bits (135), Expect = 8e-69 Identities = 187/203 (92%), Gaps = 1/203 (0%) Strand = Plus / Minus Query: 58 gaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggc 117 |||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 151248 gaggttcaaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggc 151189 Query: 118 gtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa 177 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| | Sbjct: 151188 gtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccga 151129 Query: 178 ataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 237 |||||| |||| ||| ||||| ||||||||| || || | |||||||||||| |||||| Sbjct: 151128 ataggttaaccttttgaactg-ctgctgaattcacaagtaagcaagagacaacttggcga 151070 Query: 238 actgaaacatcttagtagccaga 260 ||||||||||||||||||||||| Sbjct: 151069 actgaaacatcttagtagccaga 151047 Score = 268 bits (135), Expect = 8e-69 Identities = 187/203 (92%), Gaps = 1/203 (0%) Strand = Plus / Plus Query: 58 gaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggc 117 |||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 117418 gaggttcaaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggc 117477 Query: 118 gtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa 177 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| | Sbjct: 117478 gtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccga 117537 Query: 178 ataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 237 |||||| |||| ||| ||||| ||||||||| || || | |||||||||||| |||||| Sbjct: 117538 ataggttaaccttttgaactg-ctgctgaattcacaagtaagcaagagacaacttggcga 117596 Query: 238 actgaaacatcttagtagccaga 260 ||||||||||||||||||||||| Sbjct: 117597 actgaaacatcttagtagccaga 117619
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 266 bits (134), Expect = 3e-68 Identities = 165/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 87 gatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 146 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1 gatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagt 60 Query: 147 tgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctgctga 206 ||||||||||||||||||||||||||||| |||||| ||||| || ||||| ||||||| Sbjct: 61 tgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg-ctgctga 119 Query: 207 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 atccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 173
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 266 bits (134), Expect = 3e-68 Identities = 140/142 (98%) Strand = Plus / Minus Query: 106 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 166 ggagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagag 225 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 226 acaacctggcgaactgaaacat 247 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 52.0 bits (26), Expect = 9e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttag 31 |||||||| ||||||||||||||||||||| Sbjct: 14349347 ataagatccttccatttagtagcaccttag 14349376
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 266 bits (134), Expect = 3e-68 Identities = 189/206 (91%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| || ||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 146565 ggcgaggttcaaacgaagaagggcttacggtggatacctaggcacccagagacgaggaag 146506 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||| Sbjct: 146505 ggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccggagattcc 146446 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | ||||||| |||| ||| |||| ||||||||| ||| |||||| ||||||||||||| Sbjct: 146445 cgaataggttaaccttttgaact-actgctgaattcataggcaggcgagagacaacctgg 146387 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||| Sbjct: 146386 cgaactgaaacatcttagtagccaga 146361 Score = 266 bits (134), Expect = 3e-68 Identities = 189/206 (91%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| || ||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 111897 ggcgaggttcaaacgaagaagggcttacggtggatacctaggcacccagagacgaggaag 111956 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||| Sbjct: 111957 ggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccggagattcc 112016 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | ||||||| |||| ||| |||| ||||||||| ||| |||||| ||||||||||||| Sbjct: 112017 cgaataggttaaccttttgaact-actgctgaattcataggcaggcgagagacaacctgg 112075 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||| Sbjct: 112076 cgaactgaaacatcttagtagccaga 112101
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 266 bits (134), Expect = 3e-68 Identities = 140/142 (98%) Strand = Plus / Minus Query: 106 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 166 ggagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagag 225 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 226 acaacctggcgaactgaaacat 247 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 266 bits (134), Expect = 3e-68 Identities = 140/142 (98%) Strand = Plus / Minus Query: 106 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 166 ggagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagag 225 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 226 acaacctggcgaactgaaacat 247 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 266 bits (134), Expect = 3e-68 Identities = 140/142 (98%) Strand = Plus / Plus Query: 106 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 166 ggagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagag 225 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 226 acaacctggcgaactgaaacat 247 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 266 bits (134), Expect = 3e-68 Identities = 189/206 (91%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 177025 ggcgaggttcaaaggaggaaaggcttagggtggatacctaggcacccagagaggaggaag 177084 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 174 ||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 177085 ggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccggagattcc 177144 Query: 175 caaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 234 | |||||| ||||| || ||||| |||||||||||||| |||||||||||| |||| || Sbjct: 177145 cgaatagggcaacctttcgaactg-ctgctgaatccatgggcaggcaagagagaaccagg 177203 Query: 235 cgaactgaaacatcttagtagccaga 260 |||||||||| ||||||||||||||| Sbjct: 177204 cgaactgaaagatcttagtagccaga 177229 Score = 46.1 bits (23), Expect = 0.055 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 gcgaactgaaacatcttagtagc 256 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.055 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 gcgaactgaaacatcttagtagc 256 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 264 bits (133), Expect = 1e-67 Identities = 182/197 (92%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gttcaaatgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgta 60 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 ||||||||||||||||||||||||| |||||||||| || ||||||||||||||| |||| Sbjct: 61 gcaagcgacgaaatgcttcggggagctgaaaataagtatggatccggagattcccgaata 120 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 ||| |||| ||||||||| ||||||||| ||| || |||||||||||||| |||||||| Sbjct: 121 ggttaaccttttaaactg-ctgctgaattcataggcgggcaagagacaacccggcgaact 179 Query: 241 gaaacatcttagtagcc 257 ||||||||||||||||| Sbjct: 180 gaaacatcttagtagcc 196
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 260 bits (131), Expect = 2e-66 Identities = 183/199 (91%), Gaps = 1/199 (0%) Strand = Plus / Plus Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttcaaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtag 60 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| Sbjct: 61 caagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaatag 120 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| ||| ||||| ||||||||| || || | |||||||||||| |||||||||| Sbjct: 121 gttaaccttttgaactg-ctgctgaattcacaagtaagcaagagacaacttggcgaactg 179 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 180 aaacatcttagtagccaga 198
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 260 bits (131), Expect = 2e-66 Identities = 183/199 (91%), Gaps = 1/199 (0%) Strand = Plus / Plus Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttcaaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtag 60 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| Sbjct: 61 caagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaatag 120 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 || |||| ||| ||||| ||||||||| || || | |||||||||||| |||||||||| Sbjct: 121 gttaaccttttgaactg-ctgctgaattcacaagtaagcaagagacaacttggcgaactg 179 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 180 aaacatcttagtagccaga 198
>gb|AF141148.1|AF141148 Vigna unguiculata clone VU53KNF3-2 16S ribsomal RNA gene; partial sequence, tRNA-Ile gene; complete sequence, and 18S ribosomal RNA gene; partial sequence; chloroplast genes for chloroplast products Length = 387 Score = 258 bits (130), Expect = 8e-66 Identities = 192/210 (91%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||||||||||| | ||||| ||||||| Sbjct: 217 ataagatccttccatctagcagcaccttaggatggcatagccttcaagttaagggcgagg 158 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 157 ttcaaacgaagaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 98 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaata 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 97 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgatata 38 Query: 181 ggtcaaccctttaaactgcctgctgaatcc 210 |||||||| || ||||| ||||||||||| Sbjct: 37 ggtcaacctttcgaactg-ctgctgaatcc 9
>gb|AF142335.1|AF142335 Vigna vexillata clone TVBA27 putative ribosomal RNA genomic sequence Length = 383 Score = 258 bits (130), Expect = 8e-66 Identities = 192/210 (91%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||||||||||| | ||||| ||||||| Sbjct: 211 ataagatccttccatctagcagcaccttaggatggcatagccttcaagttaagggcgagg 152 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 151 ttcaaacgaagaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 92 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaata 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 91 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgatata 32 Query: 181 ggtcaaccctttaaactgcctgctgaatcc 210 |||||||| || ||||| ||||||||||| Sbjct: 31 ggtcaacctttcgaactg-ctgctgaatcc 3
>gb|DQ001734.1| Dracaena sanderiana voucher P.M. McNutt 011 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2713 Score = 256 bits (129), Expect = 3e-65 Identities = 147/153 (96%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 2561 ataagatccttccatttagcagcaccttaggatggcatagccttaacattaatggcgagg 2620 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 2621 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaagaagggcgtag 2680 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 ||||||||||||||||||||||||||||||||| Sbjct: 2681 caagcgacgaaatgcttcggggagttgaaaata 2713
>gb|DQ001733.1| Musa acuminata voucher P.M. McNutt 001 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2721 Score = 256 bits (129), Expect = 3e-65 Identities = 147/153 (96%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 2569 ataagatccttctatttagcagcaccttaggatggcatagccttaacgttaatggtgagg 2628 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2629 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2688 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 ||||||||||||||||||||||||||||||||| Sbjct: 2689 caagcgacgaaatgcttcggggagttgaaaata 2721
>gb|AF141147.1|AF141147 Vigna unguiculata clone VU53KNF3-1 16S ribosomal RNA gene, and 18S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 370 Score = 254 bits (128), Expect = 1e-64 Identities = 174/188 (92%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||||||||||| | ||||| ||||||| Sbjct: 217 ataagatccttccatctagcagcaccttaggatggcatagccttcaagttaagggcgagg 158 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 157 ttcaaacgaagaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 98 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaata 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 97 taagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgatata 38 Query: 181 ggtcaacc 188 |||||||| Sbjct: 37 ggtcaacc 30
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 252 bits (127), Expect = 5e-64 Identities = 182/199 (91%), Gaps = 1/199 (0%) Strand = Plus / Plus Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggtgtag 60 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 || ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct: 61 taatcgacgaaatgcttcggggagttgaaaataagcatagatccgtagattcccgaatgg 120 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 | |||| || | |||| ||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 121 ggtaacctttcacactg-ctgctcaatccatgggcaggaaagagacaacctggcgaactg 179 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 180 aaacatcttagtagccaga 198
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 250 bits (126), Expect = 2e-63 Identities = 166/178 (93%), Gaps = 1/178 (0%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 82 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 ||| ||||||||||||| ||||||||||||||| ||||||| |||| ||| ||||| ||| Sbjct: 83 gagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactg-ctg 141 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 ctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccaga 199
>gb|DQ001752.1| Salix nigra voucher P.M. McNutt 003 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2691 Score = 248 bits (125), Expect = 7e-63 Identities = 146/153 (95%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2539 ataagatccttccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 2598 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2599 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2658 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||| Sbjct: 2659 taagcgacgaaatgcttcggggagttgaaaata 2691
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 242 bits (122), Expect = 5e-61 Identities = 174/190 (91%), Gaps = 6/190 (3%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgt-----taatgg 56 |||||||| |||||||||| |||||||||||||||||||||||||| || ||| || Sbjct: 798 ataagatccttccatttagcagcaccttaggatggcatagccttaaagtcaagttaaggg 739 Query: 57 cgag-gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagg 115 |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 738 cgagtgttcaaacaaggaaaggcttacggtggatacctaggcacccagagacgaggaagg 679 Query: 116 gcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc 175 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 678 gcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattccc 619 Query: 176 aaataggtca 185 ||||||||| Sbjct: 618 gaataggtca 609
>gb|DQ001751.1| Rosa hybrid cultivar voucher P.M. McNutt 017 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2581 Score = 240 bits (121), Expect = 2e-60 Identities = 145/153 (94%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2429 ataagatccttccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 2488 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2489 ttcaaacgaagaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2548 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||| Sbjct: 2549 taagcgacgaaatgcttcggggagttgaaaata 2581
>gb|DQ001750.1| Cucurbita pepo voucher P.M. McNutt 025 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2581 Score = 240 bits (121), Expect = 2e-60 Identities = 145/153 (94%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2429 ataagatccttccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 2488 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2489 ttcaaacgaagaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2548 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||| Sbjct: 2549 taagcgacgaaatgcttcggggagttgaaaata 2581
>gb|DQ001749.1| Cucurbita pepo voucher P.M. McNutt 015 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2578 Score = 240 bits (121), Expect = 2e-60 Identities = 145/153 (94%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2426 ataagatccttccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 2485 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2486 ttcaaacgaagaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2545 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||| Sbjct: 2546 taagcgacgaaatgcttcggggagttgaaaata 2578
>gb|DQ001742.1| Daucus carota voucher P.M. McNutt 005 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2698 Score = 240 bits (121), Expect = 2e-60 Identities = 145/153 (94%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2546 ataagatccatccatttagcagcaccttaggatggcatagccttaaagttaagggcgagg 2605 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2606 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2665 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||| Sbjct: 2666 taagcgacgaaatgcttcggggagttgaaaata 2698
>gb|AY690322.1| Citrus meyeri tRNA-Ala (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 238 bits (120), Expect = 7e-60 Identities = 162/176 (92%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgt-----taatgg 56 |||||||| |||||||||| |||||||||||||||||||||||||| || ||| || Sbjct: 176 ataagatccttccatttagcagcaccttaggatggcatagccttaaagtcaagttaaggg 117 Query: 57 cgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaaggg 116 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 116 cgaggttcaaacaaggaaaggcttacggtggatacctaggcacccagagacgaggaaggg 57 Query: 117 cgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagatt 172 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 56 cgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagatt 1
>gb|AY690321.1| Citrus reticulata tRNA-tRNA (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 238 bits (120), Expect = 7e-60 Identities = 162/176 (92%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgt-----taatgg 56 |||||||| |||||||||| |||||||||||||||||||||||||| || ||| || Sbjct: 176 ataagatccttccatttagcagcaccttaggatggcatagccttaaagtcaagttaaggg 117 Query: 57 cgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaaggg 116 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 116 cgaggttcaaacaaggaaaggcttacggtggatacctaggcacccagagacgaggaaggg 57 Query: 117 cgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagatt 172 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 56 cgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagatt 1
>gb|AF141154.1|AF141154 Vigna unguiculata clone VU124NBS4 ribosomal RNA operon, partial sequence Length = 370 Score = 238 bits (120), Expect = 7e-60 Identities = 172/188 (91%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||||||||||| | ||||| ||||||| Sbjct: 155 ataagatccttccatctagcagcaccttaggatggcatagccttcaagttaagggcgagg 214 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 215 ttcaaacgaagaaaggcttatggtagatacctaggcacccagagacgaggaagggcgtag 274 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaata 180 ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||| Sbjct: 275 taagcgacgaaatgcttcggggagttgaaaatcagcgtagatccggagattcccgatata 334 Query: 181 ggtcaacc 188 |||||||| Sbjct: 335 ggtcaacc 342
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 232 bits (117), Expect = 4e-58 Identities = 168/185 (90%) Strand = Plus / Plus Query: 73 aaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaa 132 ||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 143931 aaaggcttgcggtggatacctaggcacccagagacgaagaagggcgtggcaaacgacgaa 143990 Query: 133 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacccttt 192 ||||||||||||| ||||||| | |||||||||||||||||| ||||||| |||| | Sbjct: 143991 atgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaaccttcc 144050 Query: 193 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 252 |||||||||||||||| || ||||| |||||||||||| |||||||||||||||||||| Sbjct: 144051 aaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttag 144110 Query: 253 tagcc 257 ||||| Sbjct: 144111 tagcc 144115 Score = 232 bits (117), Expect = 4e-58 Identities = 168/185 (90%) Strand = Plus / Minus Query: 73 aaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaa 132 ||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 88920 aaaggcttgcggtggatacctaggcacccagagacgaagaagggcgtggcaaacgacgaa 88861 Query: 133 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacccttt 192 ||||||||||||| ||||||| | |||||||||||||||||| ||||||| |||| | Sbjct: 88860 atgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaaccttcc 88801 Query: 193 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 252 |||||||||||||||| || ||||| |||||||||||| |||||||||||||||||||| Sbjct: 88800 aaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttag 88741 Query: 253 tagcc 257 ||||| Sbjct: 88740 tagcc 88736
>gb|DQ001739.1| Lactuca sativa voucher P.M. McNutt 016 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2717 Score = 232 bits (117), Expect = 4e-58 Identities = 144/153 (94%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||| Sbjct: 2565 ataagatccatccatttagcagcaccttaggatggcatagccttaaaattaagggcgagg 2624 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2625 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2684 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||| Sbjct: 2685 taagcgacgaaatgcttcggggagttgaaaata 2717
>gb|DQ001738.1| Lactuca sativa voucher P.M. McNutt 004 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2713 Score = 232 bits (117), Expect = 4e-58 Identities = 144/153 (94%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||| Sbjct: 2561 ataagatccatccatttagcagcaccttaggatggcatagccttaaaattaagggcgagg 2620 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2621 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2680 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||| Sbjct: 2681 taagcgacgaaatgcttcggggagttgaaaata 2713
>gb|DQ001736.1| Eschscholzia californica voucher P.M. McNutt 014 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2694 Score = 232 bits (117), Expect = 4e-58 Identities = 144/153 (94%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 ||||||| |||||||||| |||||||||||| ||||||||||||| || || ||||||| Sbjct: 2542 ataagatacttccatttagcagcaccttaggaaggcatagccttaaagtgaacggcgagg 2601 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2602 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2661 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 ||||||||||||||||||||||||||||||||| Sbjct: 2662 caagcgacgaaatgcttcggggagttgaaaata 2694
>gb|DQ001741.1| Dahlia hybrid cultivar voucher P.M. McNutt 007 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2554 Score = 224 bits (113), Expect = 1e-55 Identities = 143/153 (93%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| | || ||||||| Sbjct: 2402 ataagatccatccatttagcagcaccttaggatggcatagccttaaaatgaagggcgagg 2461 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2462 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2521 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||| Sbjct: 2522 taagcgacgaaatgcttcggggagttgaaaata 2554
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 224 bits (113), Expect = 1e-55 Identities = 152/165 (92%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||||||||||||||||||||||||||||| | ||||| ||||||| Sbjct: 151873 ataagatccttccatttagtagcaccttaggatggcatagccttcaagttaagggcgagg 151814 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 151813 ttcaaacgaggaaaggcccacggtggatacctaggcacccagagacgaggaagggcgtat 151754 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccg 166 || || ||||||||||||||||||||||||||||| |||||||| Sbjct: 151753 taatcggcgaaatgcttcggggagttgaaaataagcgtagatccg 151709
>gb|M21453.1|SPICPRGDG Spinach chloroplast 16S ribosomal RNA gene (3' end), Ile-tRNA and Ala-tRNA genes, and 23S ribosomal RNA gene (5' end) Length = 2391 Score = 224 bits (113), Expect = 1e-55 Identities = 143/153 (93%) Strand = Plus / Plus Query: 15 atttagtagcaccttaggatggcatagccttaacgttaatggcgaggttcaaaagaggaa 74 |||||| ||||||||||||||||||| |||||| ||||| ||||||||||||| |||||| Sbjct: 2239 atttagcagcaccttaggatggcataaccttaaagttaagggcgaggttcaaacgaggaa 2298 Query: 75 aggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaat 134 |||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 2299 aggcttacggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaat 2358 Query: 135 gcttcggggagttgaaaataagcatagatccgg 167 |||||||||||||||||||||||| |||||||| Sbjct: 2359 gcttcggggagttgaaaataagcagagatccgg 2391
>gb|DQ001735.1| Lemna gibba voucher P.M. McNutt 008 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2510 Score = 214 bits (108), Expect = 1e-52 Identities = 142/153 (92%), Gaps = 4/153 (2%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| || ||||||| ||||||||||||| ||||||||||||| ||||||||| Sbjct: 2362 ataagatcctttcatttagcagcaccttaggatagcatagccttaac----atggcgagg 2417 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2418 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2477 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||| Sbjct: 2478 taagcgacgaaatgcttcggggagttgaaaata 2510
>gb|AF141151.1|AF141151 Vigna unguiculata clone VU124KNF1-1 16S ribosomal RNA gene, partial sequence and 18S ribosomal RNA gene, partial sequence Length = 345 Score = 214 bits (108), Expect = 1e-52 Identities = 169/188 (89%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||||||||||| | ||||| ||||||| Sbjct: 144 ataagatccttccatctagcagcaccttaggatggcatagccttcaagttaagggcgagg 203 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || |||||||| ||| |||||||||||||||| |||||||||||||||||| Sbjct: 204 ttcaaacgaacaaaggcttatggtagatacctaggcacccatagacgaggaagggcgtag 263 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaata 180 |||||||||||||||| |||||||||||||| ||| ||||||||||||||||| | ||| Sbjct: 264 taagcgacgaaatgctttggggagttgaaaatcagcgtagatccggagattcccgatata 323 Query: 181 ggtcaacc 188 |||||||| Sbjct: 324 ggtcaacc 331
>gb|DQ001754.1| Citrus reticulata voucher P.M. McNutt 019 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2728 Score = 210 bits (106), Expect = 2e-51 Identities = 145/158 (91%), Gaps = 5/158 (3%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgt-----taatgg 56 |||||||| |||||||||| |||||||||||||||||||||||||| || ||| || Sbjct: 2571 ataagatccttccatttagcagcaccttaggatggcatagccttaaagtcaagttaaggg 2630 Query: 57 cgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaaggg 116 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2631 cgaggttcaaacaaggaaaggcttacggtggatacctaggcacccagagacgaggaaggg 2690 Query: 117 cgtagcaagcgacgaaatgcttcggggagttgaaaata 154 ||||| |||||||||||||||||||||||||||||||| Sbjct: 2691 cgtagtaagcgacgaaatgcttcggggagttgaaaata 2728
>gb|DQ001747.1| Nicotiana tabacum voucher P.M. McNutt 023 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2379 Score = 210 bits (106), Expect = 2e-51 Identities = 143/154 (92%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 2226 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 2285 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2286 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 2345 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaata 154 | || ||||||||||||||||||||||||||||| Sbjct: 2346 gtaatcgacgaaatgcttcggggagttgaaaata 2379
>gb|DQ001746.1| Lycopersicon esculentum voucher P.M. McNutt 024 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2494 Score = 210 bits (106), Expect = 2e-51 Identities = 143/154 (92%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 2341 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 2400 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2401 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 2460 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaata 154 | || ||||||||||||||||||||||||||||| Sbjct: 2461 gtaatcgacgaaatgcttcggggagttgaaaata 2494
>gb|DQ001745.1| Solanum tuberosum voucher P.M. McNutt 010 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2495 Score = 210 bits (106), Expect = 2e-51 Identities = 143/154 (92%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 2342 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 2401 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2402 gttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgta 2461 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaata 154 | || ||||||||||||||||||||||||||||| Sbjct: 2462 gtaatcgacgaaatgcttcggggagttgaaaata 2495
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 210 bits (106), Expect = 2e-51 Identities = 160/178 (89%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 82 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 ||| ||| || |||||| ||||||||||| ||| |||||| |||| || |||||||| Sbjct: 83 gagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 142 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||| || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccaga 200
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 208 bits (105), Expect = 6e-51 Identities = 165/185 (89%) Strand = Plus / Plus Query: 76 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 135 ||||| |||||||||||||||||||||||||||| |||||||||| || |||||||| | Sbjct: 717 ggcttacggtggatacctaggcacccagagacgaagaagggcgtactaaccgacgaaacg 776 Query: 136 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaa 195 |||||||||| |||||| |||||| ||||||||||||||| |||||| ||||| || || Sbjct: 777 cttcggggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaa 836 Query: 196 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 255 || |||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 837 cttcctgctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagtag 896 Query: 256 ccaga 260 ||||| Sbjct: 897 ccaga 901
>gb|DQ001740.1| Helianthus annuus voucher P.M. McNutt 021 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2551 Score = 208 bits (105), Expect = 6e-51 Identities = 142/153 (92%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||| ||||||||||| | || ||||||| Sbjct: 2400 ataagatccatccatttagcagcaccttaggatg-catagccttaaaatgaagggcgagg 2458 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2459 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtag 2518 Query: 122 caagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||| Sbjct: 2519 taagcgacgaaatgcttcggggagttgaaaata 2551
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 208 bits (105), Expect = 6e-51 Identities = 151/165 (91%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||||||||||||||||||||||||||||| | || ||||| ||||||| Sbjct: 248136 ataagatccttccatttagtagcaccttaggatggcatagcttcaa-gttaagggcgagg 248078 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 248077 ttcaaacgaggaaaggcccacggtggatacctaggcacccagagacgaggaagggcgtat 248018 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccg 166 || || ||||||||||||||||||||||||||||| |||||||| Sbjct: 248017 taatcggcgaaatgcttcggggagttgaaaataagcgtagatccg 247973
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 206 bits (104), Expect = 3e-50 Identities = 110/112 (98%) Strand = Plus / Plus Query: 149 aaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctgctgaat 208 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 209 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 112
>gb|DQ001748.1| Fragaria vesca voucher P.M. McNutt 020 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2737 Score = 204 bits (103), Expect = 1e-49 Identities = 146/159 (91%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttagg--atggcatagccttaac----gttaatg 55 |||||||| |||||||||| ||||||||||| ||||||||||||||| ||||| | Sbjct: 2579 ataagatccttccatttagcagcaccttaggggatggcatagccttaaataaagttaagg 2638 Query: 56 gcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagg 115 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2639 gcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagg 2698 Query: 116 gcgtagcaagcgacgaaatgcttcggggagttgaaaata 154 |||||| |||||||||||||||||||||||||||||||| Sbjct: 2699 gcgtagtaagcgacgaaatgcttcggggagttgaaaata 2737
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 202 bits (102), Expect = 4e-49 Identities = 159/178 (89%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 186 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 || ||| || |||||| ||||||||||| ||| |||||| |||| || |||||||| Sbjct: 187 aagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 246 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||| || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccaga 304
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 202 bits (102), Expect = 4e-49 Identities = 126/134 (94%) Strand = Plus / Minus Query: 68 agaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcg 127 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | Sbjct: 24063495 agaggaaaggcttgcggtggatacctaggtacccagagacgaggaaggacgtagcaagag 24063436 Query: 128 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 187 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 24063435 acgaaatgctttggggagttgaaaataatcatagatccggagattcccaaataggtcaac 24063376 Query: 188 cctttaaactgcct 201 ||| |||||||| Sbjct: 24063375 attttgaactgcct 24063362
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 202 bits (102), Expect = 4e-49 Identities = 126/134 (94%) Strand = Plus / Minus Query: 68 agaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcg 127 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | Sbjct: 23991701 agaggaaaggcttgcggtggatacctaggtacccagagacgaggaaggacgtagcaagag 23991642 Query: 128 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 187 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 23991641 acgaaatgctttggggagttgaaaataatcatagatccggagattcccaaataggtcaac 23991582 Query: 188 cctttaaactgcct 201 ||| |||||||| Sbjct: 23991581 attttgaactgcct 23991568
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 202 bits (102), Expect = 4e-49 Identities = 126/134 (94%) Strand = Plus / Plus Query: 68 agaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcg 127 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | Sbjct: 23901 agaggaaaggcttgcggtggatacctaggtacccagagacgaggaaggacgtagcaagag 23960 Query: 128 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 187 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 23961 acgaaatgctttggggagttgaaaataatcatagatccggagattcccaaataggtcaac 24020 Query: 188 cctttaaactgcct 201 ||| |||||||| Sbjct: 24021 attttgaactgcct 24034
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 198 bits (100), Expect = 6e-48 Identities = 158/178 (88%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 || ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 69 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 ||| ||| || |||||| ||||||||||| ||| |||||| |||| || |||||||| Sbjct: 70 gagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 129 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||| || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 ctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccaga 187
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 190 bits (96), Expect = 1e-45 Identities = 102/104 (98%) Strand = Plus / Plus Query: 157 catagatccggagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagc 216 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 217 aggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccaga 104
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 188 bits (95), Expect = 6e-45 Identities = 101/103 (98%) Strand = Plus / Plus Query: 158 atagatccggagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagca 217 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 218 ggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccaga 103
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 186 bits (94), Expect = 2e-44 Identities = 176/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 59 aggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcg 118 ||||||||| ||||| ||||| ||||||||||||||| || ||||||||| |||||||| Sbjct: 4032 aggttcaaataaggaagggcttacggtggatacctaggtactcagagacgaagaagggcg 4091 Query: 119 tagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaa 178 ||| |||||||||||||||||||||||| ||||| | |||||||||||||||||||| || Sbjct: 4092 tagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaa 4151 Query: 179 taggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaa 238 | || ||||| || |||||| ||||||||||| || | |||||| ||||||| ||| Sbjct: 4152 tggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaacctggtgaa 4210 Query: 239 ctgaaacatcttagtagccaga 260 |||||||||||||||||||||| Sbjct: 4211 ctgaaacatcttagtagccaga 4232
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 182 bits (92), Expect = 4e-43 Identities = 174/200 (87%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| ||||| ||||| ||||||||||||||| || ||||||||| |||||||||| Sbjct: 1 gttcaaataaggaagggcttacggtggatacctaggtactcagagacgaagaagggcgta 60 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | |||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||| Sbjct: 61 gtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatg 120 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || |||||| ||||||||||| || | |||||| ||||||| ||||| Sbjct: 121 gggtaaccccttgtactgcc-gctgaatccataggcggataagagagaacctggtgaact 179 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 180 gaaacatcttagtagccaga 199
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 182 bits (92), Expect = 4e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 161 gatccggagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggc 220 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 221 aagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccaga 100
>gb|DQ001737.1| Hatiora gaertneri voucher P.M. McNutt 009 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2794 Score = 180 bits (91), Expect = 1e-42 Identities = 136/151 (90%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 ||||||| ||| | ||||| ||||||||||||||||||| |||||| || || ||||||| Sbjct: 2642 ataagatatttacttttagcagcaccttaggatggcataaccttaaagtgaagggcgagg 2701 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| || ||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 2702 ttcaaacgaagaaaggcttacggtggattcctaggcacccagagacgaggaagggcgtaa 2761 Query: 122 caagcgacgaaatgcttcggggagttgaaaa 152 || ||||||||||||||||||||||||||| Sbjct: 2762 taatcgacgaaatgcttcggggagttgaaaa 2792
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 180 bits (91), Expect = 1e-42 Identities = 172/199 (86%) Strand = Plus / Minus Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| ||| || ||||| |||||||||||||||||||||||||||| ||||||||| | Sbjct: 125263 ttcaaatgagtaagggcttacggtggatacctaggcacccagagacgaagaagggcgtgg 125204 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||| || || ||||||||||||| ||| ||| ||||| Sbjct: 125203 taagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatag 125144 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 | ||||| || ||| | |||||||||||| ||| | |||||| |||||||||||||| Sbjct: 125143 ggcaacctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactg 125084 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 125083 aaacatcttagtagccaga 125065 Score = 180 bits (91), Expect = 1e-42 Identities = 172/199 (86%) Strand = Plus / Plus Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| ||| || ||||| |||||||||||||||||||||||||||| ||||||||| | Sbjct: 94603 ttcaaatgagtaagggcttacggtggatacctaggcacccagagacgaagaagggcgtgg 94662 Query: 122 caagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatag 181 ||||||||||||||||||||||| || || ||||||||||||| ||| ||| ||||| Sbjct: 94663 taagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatag 94722 Query: 182 gtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 241 | ||||| || ||| | |||||||||||| ||| | |||||| |||||||||||||| Sbjct: 94723 ggcaacctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactg 94782 Query: 242 aaacatcttagtagccaga 260 ||||||||||||||||||| Sbjct: 94783 aaacatcttagtagccaga 94801
>gb|DQ001753.1| Lathyrus odoratus voucher P.M. McNutt 022 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2668 Score = 178 bits (90), Expect = 6e-42 Identities = 132/146 (90%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 ||||||| |||||| |||||||||||||||||||||||| | | || || ||||||| Sbjct: 2514 ataagatacttccatctagtagcaccttaggatggcatagagtcgaagtgaagggcgagg 2573 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtag 121 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2574 ttcaaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtag 2633 Query: 122 caagcgacgaaatgcttcggggagtt 147 ||||||||||||||||||||||||| Sbjct: 2634 taagcgacgaaatgcttcggggagtt 2659
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 176 bits (89), Expect = 2e-41 Identities = 161/185 (87%) Strand = Plus / Plus Query: 76 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 135 ||||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 16 ggcttacggtggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaatg 75 Query: 136 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaa 195 |||||||||| || || ||||||||||||| ||| ||| |||||| ||||| || | Sbjct: 76 cttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgta 135 Query: 196 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 255 || | |||||||||||| ||| | |||||| |||||||||||||||||||||||||||| Sbjct: 136 ctacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtag 195 Query: 256 ccaga 260 ||||| Sbjct: 196 ccaga 200
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 174 bits (88), Expect = 9e-41 Identities = 173/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| ||||| ||||| ||||||||||||||| || ||||||||| |||||||||| Sbjct: 1 gttcaaataaggaagggcttacggtggatacctaggtactcagagacgaagaagggcgta 60 Query: 121 gcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaata 180 | |||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||| Sbjct: 61 gtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatg 120 Query: 181 ggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaact 240 || ||||| || |||||| ||||||| ||| || | |||||| ||||||| ||||| Sbjct: 121 gggtaaccccttgtactgcc-gctgaatacataggcggataagagagaacctggtgaact 179 Query: 241 gaaacatcttagtagccaga 260 |||||||||||||||||||| Sbjct: 180 gaaacatcttagtagccaga 199
>gb|DQ001744.1| Ocimum basilicum voucher P.M. McNutt 002 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2717 Score = 167 bits (84), Expect = 2e-38 Identities = 96/100 (96%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2618 ggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaag 2677 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaata 154 ||||||| || ||||||||||||||||||||||||||||| Sbjct: 2678 ggcgtagtaatcgacgaaatgcttcggggagttgaaaata 2717 Score = 52.0 bits (26), Expect = 9e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaa 47 |||||||| ||||||||| |||||||| |||||||||||||||| Sbjct: 2553 ataagatccatccatttagcagcaccttcagatggcatagccttaa 2598
>gb|DQ001743.1| Mentha x piperita voucher P.M. McNutt 012 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2734 Score = 167 bits (84), Expect = 2e-38 Identities = 96/100 (96%) Strand = Plus / Plus Query: 55 ggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag 114 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2635 ggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaag 2694 Query: 115 ggcgtagcaagcgacgaaatgcttcggggagttgaaaata 154 ||||||| || ||||||||||||||||||||||||||||| Sbjct: 2695 ggcgtagtaatcgacgaaatgcttcggggagttgaaaata 2734 Score = 65.9 bits (33), Expect = 6e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagcctta 46 |||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 2562 ataagatccatccatttagcagcaccttaggatggcatagcctta 2606
>dbj|AK061298.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E04, full insert sequence Length = 986 Score = 161 bits (81), Expect = 1e-36 Identities = 84/85 (98%) Strand = Plus / Plus Query: 70 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 129 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1 aggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgac 60 Query: 130 gaaatgcttcggggagttgaaaata 154 ||||||||||||||||||||||||| Sbjct: 61 gaaatgcttcggggagttgaaaata 85
>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; ribosomal protein S12 (rps12) gene, partial cds; tRNA-Val, 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; 23S ribosomal RNA gene, partial sequence; and unknown gene; chloroplast Length = 8165 Score = 159 bits (80), Expect = 5e-36 Identities = 104/112 (92%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||| Sbjct: 8054 ataagatccatccatttagcagcaccttaggatggcatagccttaaaattaagggcgagg 8113 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaa 113 |||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 8114 ttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaa 8165
>gb|DQ001755.1| Physcomitrella patens voucher P.M. McNutt 013 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2405 Score = 153 bits (77), Expect = 3e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 50 ttaatggcgaggttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacga 109 |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 2301 ttaatggcgaggttcaaacgaataagggcttatggtggatacctaggcacccagagacga 2360 Query: 110 ggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 154 |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2361 ggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaata 2405
>dbj|AK109207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C10, full insert sequence Length = 777 Score = 153 bits (77), Expect = 3e-34 Identities = 80/81 (98%) Strand = Plus / Plus Query: 71 ggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacg 130 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 ggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacg 60 Query: 131 aaatgcttcggggagttgaaa 151 ||||||||||||||||||||| Sbjct: 61 aaatgcttcggggagttgaaa 81
>emb|AJ391753.1|VSA391753 Vicia sativa genomic repetitive element, clone S35 Length = 324 Score = 149 bits (75), Expect = 5e-33 Identities = 133/150 (88%), Gaps = 3/150 (2%) Strand = Plus / Minus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgagg 61 |||||||| |||||| ||| |||||||||||||||||||| || | ||| | ||||||| Sbjct: 199 ataagatccttccatctagcagcaccttaggatggcatagagttgaagtttagggcgagg 140 Query: 62 ttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggc--gt 119 |||||| |||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 139 ttcaaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtgt 80 Query: 120 ag-caagcgacgaaatgcttcggggagttg 148 || || ||||||||||||||||||||||| Sbjct: 79 agataaacgacgaaatgcttcggggagttg 50
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 147 bits (74), Expect = 2e-32 Identities = 160/186 (86%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 76 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 135 ||||| ||||||||||||||| || ||||||||| ||||||||||| ||||||||||| | Sbjct: 16 ggcttacggtggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaacg 75 Query: 136 cttcggggagttgaaaataagcatagatccggagattcccaaat-aggtcaaccctttaa 194 ||||||||||| ||||| | | ||||||||||||||||| ||| ||| | |||||| Sbjct: 76 cttcggggagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctttgt 135 Query: 195 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 254 |||||| ||||||| ||| ||| | |||||||||||||| ||||||||||||||||||| Sbjct: 136 actgcc-gctgaattcataagcggataagagacaacctggtgaactgaaacatcttagta 194 Query: 255 gccaga 260 ||||| Sbjct: 195 accaga 200
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 139 bits (70), Expect = 5e-30 Identities = 121/138 (87%) Strand = Plus / Minus Query: 32 gatggcatagccttaacgttaatggcgaggttcaaaagaggaaaggcttgcggtggatac 91 |||||||||||||||| || || || ||||||||| || |||||||| ||||||||||| Sbjct: 3831 gatggcatagccttaaagtgaagggtcaggttcaaatgaagaaaggctggcggtggatac 3772 Query: 92 ctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaa 151 ||| |||||||||||||||||||||| ||| |||||||||||||||| | |||||| || Sbjct: 3771 ctatgcacccagagacgaggaagggcatagttagcgacgaaatgcttcagagagttgcaa 3712 Query: 152 ataagcatagatccggag 169 |||||| |||||| |||| Sbjct: 3711 ataagcgtagatcaggag 3694 Score = 105 bits (53), Expect = 7e-20 Identities = 75/81 (92%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 180 aggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 239 ||||||||| || ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 240 tgaaacatcttagtagccaga 260 ||||| ||||||||||||||| Sbjct: 3636 tgaaatatcttagtagccaga 3616
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 137 bits (69), Expect = 2e-29 Identities = 122/137 (89%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 124 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 183 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 184 caaccctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 243 |||| ||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 244 acatcttagtagccaga 260 ||||||||||| ||||| Sbjct: 6394 acatcttagtaaccaga 6378
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 133 bits (67), Expect = 3e-28 Identities = 67/67 (100%) Strand = Plus / Plus Query: 194 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 254 agccaga 260 ||||||| Sbjct: 61 agccaga 67
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 131 bits (66), Expect = 1e-27 Identities = 153/178 (85%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 ||||||||||||||||||||| || || ||||||| || || || ||||||||||||| Sbjct: 21 ggtggatacctaggcacccagggatgaagaagggcataataattgatgaaatgcttcggg 80 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 ||||| ||||||| ||||||||||||||||||| ||||||| |||| || |||||| ||| Sbjct: 81 gagttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctg 139 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 || | |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| |||| Sbjct: 140 cttattccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacaga 195
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 131 bits (66), Expect = 1e-27 Identities = 147/174 (84%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 |||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 82 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 ||| || || ||| ||||||||| |||||||| |||||| ||||| || ||| |||| Sbjct: 83 gagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacctg 142 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagc 256 ||| ||| | |||| ||||| ||||| | ||||||||||||||||||||| Sbjct: 143 taaaatacataatcaggttagagaaaacctagtgaactgaaacatcttagtagc 196
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 127 bits (64), Expect = 2e-26 Identities = 89/96 (92%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 165 cggagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaaga 224 ||||||||||| |||||| ||||| || |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 225 gacaacctggcgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccaga 418
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 121 bits (61), Expect = 1e-24 Identities = 100/113 (88%) Strand = Plus / Plus Query: 76 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 135 ||||| |||||||||||||||||||||||||||| ||||||||||| || |||||||| | Sbjct: 1769 ggcttacggtggatacctaggcacccagagacgatgaagggcgtagtaaccgacgaaacg 1828 Query: 136 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 |||||||||| || ||| |||| | |||||| |||||||| |||||| ||||| Sbjct: 1829 cttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaacc 1881 Score = 46.1 bits (23), Expect = 0.055 Identities = 32/35 (91%) Strand = Plus / Plus Query: 222 agagacaacctggcgaactgaaacatcttagtagc 256 |||| |||||| | ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagc 1949
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 119 bits (60), Expect = 5e-24 Identities = 154/179 (86%), Gaps = 6/179 (3%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 ||||||||||||||||||||| || || ||||||| || || || ||||||||| ||| Sbjct: 21 ggtggatacctaggcacccagggatgaagaagggcataataattgatgaaatgctttggg 80 Query: 143 gagttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcct 201 ||||| |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| | Sbjct: 81 gagttaaaaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc-t 137 Query: 202 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 ||| | |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 138 gcttattccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccaga 194
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 117 bits (59), Expect = 2e-23 Identities = 113/130 (86%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 71 ggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacg 130 |||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 139259 ggaaaggcttacggtggatacctaggcacccaaagacgaggaagggcgtagcaggcgac- 139201 Query: 131 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccct 190 ||||||||||| || | |||||||||||||||||||| ||| ||| ||| ||||| Sbjct: 139200 -aatgcttcgggaagccagagataagcatagatccggagatccccgaatgggttaacccc 139142 Query: 191 ttaaactgcc 200 || ||||||| Sbjct: 139141 ttgaactgcc 139132 Score = 117 bits (59), Expect = 2e-23 Identities = 113/130 (86%), Gaps = 2/130 (1%) Strand = Plus / Plus Query: 71 ggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacg 130 |||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 82618 ggaaaggcttacggtggatacctaggcacccaaagacgaggaagggcgtagcaggcgac- 82676 Query: 131 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccct 190 ||||||||||| || | |||||||||||||||||||| ||| ||| ||| ||||| Sbjct: 82677 -aatgcttcgggaagccagagataagcatagatccggagatccccgaatgggttaacccc 82735 Query: 191 ttaaactgcc 200 || ||||||| Sbjct: 82736 ttgaactgcc 82745
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 115 bits (58), Expect = 7e-23 Identities = 145/174 (83%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 |||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| ||| Sbjct: 3057 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgctttggg 3116 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 ||| || || ||| ||||||||| |||||||| |||||| ||||| || ||| |||| Sbjct: 3117 gagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacctg 3176 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagc 256 ||| ||| |||| ||||| ||||| | ||||||||||||||||||||| Sbjct: 3177 taaaatacatagtcaggttagagaaaacctagtgaactgaaacatcttagtagc 3230
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 115 bits (58), Expect = 7e-23 Identities = 145/174 (83%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 |||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagagacgaagaagggcgtagtcagcgacgaaatgcttcggg 82 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 ||| || || ||||||| ||||| |||||||| |||||| |||| || ||| |||| Sbjct: 83 gagctgcgaacaagcataaatccgaagattcccgaatagggtaacctcttgtactacctg 142 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagc 256 |||| || | |||| ||||| ||||| | ||||||||||||||||||||| Sbjct: 143 tagaattaataatcaggttagagaaaacctagtgaactgaaacatcttagtagc 196
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 115 bits (58), Expect = 7e-23 Identities = 145/174 (83%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 |||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1790 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 1849 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 ||| || || ||| ||| ||||| |||||||| |||||| |||| || ||| |||| Sbjct: 1850 gagctgcgaacaagtataaatccgaagattcccgaatagggtaacctcttgtactacctg 1909 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagc 256 |||| || | |||| ||||| ||||| | ||||||||||||||||||||| Sbjct: 1910 tataatcaataatcaggttagagaaaacctagtgaactgaaacatcttagtagc 1963
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 113 bits (57), Expect = 3e-22 Identities = 153/185 (82%) Strand = Plus / Minus Query: 76 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 135 ||||| ||||||||||||||||| |||||||||| |||||||||| || |||||||| | Sbjct: 115660 ggcttacggtggatacctaggcatccagagacgacgaagggcgtactaatcgacgaaacg 115601 Query: 136 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaa 195 || |||| || ||| || |||||| ||||||||||| ||| |||||| ||||| || || Sbjct: 115600 ctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaa 115541 Query: 196 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 255 || | ||||||| || || | ||||||||||||| ||| |||||||||||||||| Sbjct: 115540 ctctccgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtag 115481 Query: 256 ccaga 260 ||||| Sbjct: 115480 ccaga 115476 Score = 113 bits (57), Expect = 3e-22 Identities = 153/185 (82%) Strand = Plus / Plus Query: 76 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 135 ||||| ||||||||||||||||| |||||||||| |||||||||| || |||||||| | Sbjct: 86328 ggcttacggtggatacctaggcatccagagacgacgaagggcgtactaatcgacgaaacg 86387 Query: 136 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaa 195 || |||| || ||| || |||||| ||||||||||| ||| |||||| ||||| || || Sbjct: 86388 ctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaa 86447 Query: 196 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 255 || | ||||||| || || | ||||||||||||| ||| |||||||||||||||| Sbjct: 86448 ctctccgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtag 86507 Query: 256 ccaga 260 ||||| Sbjct: 86508 ccaga 86512
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 113 bits (57), Expect = 3e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 200 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 259 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 260 a 260 | Sbjct: 77 a 77
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 111 bits (56), Expect = 1e-21 Identities = 150/176 (85%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | ||| ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggtcgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 111 bits (56), Expect = 1e-21 Identities = 150/176 (85%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggcgaactgaaacatcttagtatccaga 196
>emb|V00166.1|CHNTRN2 Tobacco chloroplast spacer region between the 16S and 23S rRNAs. Also contains two transfer RNAs specific for Ile and Ala which are interrupted by introns Length = 2165 Score = 111 bits (56), Expect = 1e-21 Identities = 87/96 (90%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 2 ataagatctttccatttagtagcaccttaggatggcatagccttaac-gttaatggcgag 60 |||||||| ||||||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 2070 ataagatccatccatttagcagcaccttaggatggcatagccttaaaagtgaagggcgag 2129 Query: 61 gttcaaaagaggaaaggcttgcggtggatacctagg 96 ||||||| |||||||||||| ||||||||||||||| Sbjct: 2130 gttcaaacgaggaaaggcttacggtggatacctagg 2165
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 109 bits (55), Expect = 4e-21 Identities = 149/178 (83%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 ||||||||||||| |||| ||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 426 ggtggatacctagacacctagaaacgatgaagggcgtagaaagcgacgaaatgcttcggt 485 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 | || || ||| || | |||||||||||| |||||| ||||| | |||||||| || Sbjct: 486 taactgcgaacaag--taaacccggagattcccgaatagggcaacc-tgtaaactgcttg 542 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||| ||| || | |||||||||||||| ||||||||||||||||||| ||||| Sbjct: 543 ctgaattcataggcgagtaagagacaacctggtgaactgaaacatcttagtaaccaga 600
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 105 bits (53), Expect = 7e-20 Identities = 59/61 (96%) Strand = Plus / Minus Query: 200 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 259 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 321 ctgctgaatccatgggcaggcaggagacaacctggcgaactgaaacatcttagtagccag 262 Query: 260 a 260 | Sbjct: 261 a 261
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 103 bits (52), Expect = 3e-19 Identities = 149/176 (84%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 146 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccctttaaactgcctgct 204 || |||| ||| ||||||||||||||||||| ||||||| |||| || |||||| ||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgct 142 Query: 205 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccaga 196
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 103 bits (52), Expect = 3e-19 Identities = 142/172 (82%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 ||||||||||| || ||||| ||| ||||||||||| | |||||| | ||||||||||| Sbjct: 13 ggatacctagggactcagagtcgatgaagggcgtagttaccgacgatacgcttcggggag 72 Query: 146 ttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctgctg 205 || || |||| | |||||| |||||||| |||||| ||||| | || ||| |||| || Sbjct: 73 ctggaatcaagctttgatccgaagattcccgaatagggcaaccttatatacttcctgttg 132 Query: 206 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 257 ||| ||| |||| ||||||||||| |||||| |||||||||||||||||| Sbjct: 133 aattcatagacaggtaagagacaacccggcgaattgaaacatcttagtagcc 184
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 103 bits (52), Expect = 3e-19 Identities = 92/106 (86%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 || ||| |||||||||||||||||||| ||||||||||| || |||||||| |||||||| Sbjct: 10 ggyggagacctaggcacccagagacgatgaagggcgtagtaaccgacgaaacgcttcggg 69 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 ||| || ||| |||| | |||||| |||||||| |||||| ||||| Sbjct: 70 gagctggaaacaagctttgatccgtagattcccgaatagggcaacc 115 Score = 46.1 bits (23), Expect = 0.055 Identities = 32/35 (91%) Strand = Plus / Plus Query: 222 agagacaacctggcgaactgaaacatcttagtagc 256 |||| |||||| | ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagc 183
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 101 bits (51), Expect = 1e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 90 acctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 149 |||||||||||||||||||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 9 acctaggcacccagagacgatgaagggcgtggaaaccgacgaaacgcttcggggagctgg 68 Query: 150 aaataagcatagatccggagattcccaaataggtcaacc 188 ||| ||||| ||||||||||||||| |||||| ||||| Sbjct: 69 aaacaagcaatgatccggagattcccgaatagggcaacc 107 Score = 42.1 bits (21), Expect = 0.85 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gaactgaaacatcttagtagc 256 ||||||||||||||||||||| Sbjct: 155 gaactgaaacatcttagtagc 175
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 99.6 bits (50), Expect = 4e-18 Identities = 92/106 (86%) Strand = Plus / Minus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 ||||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 171496 ggtggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggg 171437 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 ||| || || |||| ||||||||||||||| |||||| ||||| Sbjct: 171436 gagctggaagcaagctctgatccggagattcccgaatagggcaacc 171391 Score = 99.6 bits (50), Expect = 4e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 ||||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 121430 ggtggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggg 121489 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 ||| || || |||| ||||||||||||||| |||||| ||||| Sbjct: 121490 gagctggaagcaagctctgatccggagattcccgaatagggcaacc 121535 Score = 46.1 bits (23), Expect = 0.055 Identities = 32/35 (91%) Strand = Plus / Minus Query: 222 agagacaacctggcgaactgaaacatcttagtagc 256 |||| |||||| ||||| ||||||||||||||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagc 171323 Score = 46.1 bits (23), Expect = 0.055 Identities = 32/35 (91%) Strand = Plus / Plus Query: 222 agagacaacctggcgaactgaaacatcttagtagc 256 |||| |||||| ||||| ||||||||||||||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagc 121603
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 99.6 bits (50), Expect = 4e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 ||||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 21 ggtggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggg 80 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 ||| || || |||| ||||||||||||||| |||||| ||||| Sbjct: 81 gagctggaagcaagctctgatccggagattcccgaatagggcaacc 126 Score = 46.1 bits (23), Expect = 0.055 Identities = 32/35 (91%) Strand = Plus / Plus Query: 222 agagacaacctggcgaactgaaacatcttagtagc 256 |||| |||||| ||||| ||||||||||||||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagc 194
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 95.6 bits (48), Expect = 7e-17 Identities = 115/132 (87%), Gaps = 4/132 (3%) Strand = Plus / Plus Query: 130 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 188 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 189 ctttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 248 || |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 249 ttagtagccaga 260 |||||| ||||| Sbjct: 185 ttagtatccaga 196
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 95.6 bits (48), Expect = 7e-17 Identities = 145/178 (81%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 || ||| ||||||||| |||||||||| |||||||||| || |||||||| ||| |||| Sbjct: 10 ggyggagacctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccggg 69 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 || ||| || |||||| ||||||||||| ||| |||||| ||||| || |||| | | Sbjct: 70 aagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctccg 129 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||| || || | ||||||||||||| ||| ||||||||||||||||||||| Sbjct: 130 ctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccaga 187
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 93.7 bits (47), Expect = 3e-16 Identities = 90/103 (87%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 ||||||||||||||| |||||||| ||||||||| | || |||||||| ||||||||||| Sbjct: 24815 ggatacctaggcacctagagacgatgaagggcgtgg-aaccgacgaaacgcttcggggag 24873 Query: 146 ttgaaaataagcatagatccggagattcccaaataggtcaacc 188 || ||| ||||| ||||||||||||||| |||||| ||||| Sbjct: 24874 ctggaaacaagcaatgatccggagattcccgaatagggcaacc 24916 Score = 42.1 bits (21), Expect = 0.85 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gaactgaaacatcttagtagc 256 ||||||||||||||||||||| Sbjct: 24964 gaactgaaacatcttagtagc 24984
>emb|X97297.1|OACHTRNAI Oenothera argillicola chloroplast 16S rRNA, trnI, trnA and 23S rRNA genes Length = 2956 Score = 93.7 bits (47), Expect = 3e-16 Identities = 91/103 (88%), Gaps = 2/103 (1%) Strand = Plus / Plus Query: 6 gatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttca 65 |||| |||||||||| ||||||||| |||| | |||||| | ||||| ||||||||||| Sbjct: 2856 gatccttccatttagcagcaccttatgatg-cggagccttcaagttaagggcgaggttca 2914 Query: 66 aaagaggaaaggcttgcggtggatacctaggcacccagagacg 108 || |||||||||||| |||| |||||||||||||||||||||| Sbjct: 2915 aacgaggaaaggcttacggt-gatacctaggcacccagagacg 2956
>emb|X97296.1|OACHTRNIA Oenothera atrovirens chloroplast 16S rRNA, trnI, trnA and 23S rRNA genes Length = 3096 Score = 93.7 bits (47), Expect = 3e-16 Identities = 91/103 (88%), Gaps = 2/103 (1%) Strand = Plus / Plus Query: 6 gatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttca 65 |||| |||||||||| ||||||||| |||| | |||||| | ||||| ||||||||||| Sbjct: 2996 gatccttccatttagcagcaccttatgatg-cggagccttcaagttaagggcgaggttca 3054 Query: 66 aaagaggaaaggcttgcggtggatacctaggcacccagagacg 108 || |||||||||||| |||| |||||||||||||||||||||| Sbjct: 3055 aacgaggaaaggcttacggt-gatacctaggcacccagagacg 3096
>emb|X97294.1|OGCHTRNIA Oenothera grandiflora chloroplast 16S rRNA, trnI, trnA and 23S rRNA genes Length = 3004 Score = 93.7 bits (47), Expect = 3e-16 Identities = 91/103 (88%), Gaps = 2/103 (1%) Strand = Plus / Plus Query: 6 gatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttca 65 |||| |||||||||| ||||||||| |||| | |||||| | ||||| ||||||||||| Sbjct: 2904 gatccttccatttagcagcaccttatgatg-cggagccttcaagttaagggcgaggttca 2962 Query: 66 aaagaggaaaggcttgcggtggatacctaggcacccagagacg 108 || |||||||||||| |||| |||||||||||||||||||||| Sbjct: 2963 aacgaggaaaggcttacggt-gatacctaggcacccagagacg 3004
>emb|X97293.1|OSCHTRNIA Oenothera suavolens chloroplast 16S rRNA, trnI, trnA and 23S rRNA genes Length = 2972 Score = 93.7 bits (47), Expect = 3e-16 Identities = 91/103 (88%), Gaps = 2/103 (1%) Strand = Plus / Plus Query: 6 gatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttca 65 |||| |||||||||| ||||||||| |||| | |||||| | ||||| ||||||||||| Sbjct: 2872 gatccttccatttagcagcaccttatgatg-cggagccttcaagttaagggcgaggttca 2930 Query: 66 aaagaggaaaggcttgcggtggatacctaggcacccagagacg 108 || |||||||||||| |||| |||||||||||||||||||||| Sbjct: 2931 aacgaggaaaggcttacggt-gatacctaggcacccagagacg 2972
>emb|X97292.1|OECHTRNIA Oenothera elata chloroplast 16S rRNA, trnI, trnA and 23S rRNA genes Length = 3053 Score = 93.7 bits (47), Expect = 3e-16 Identities = 91/103 (88%), Gaps = 2/103 (1%) Strand = Plus / Plus Query: 6 gatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttca 65 |||| |||||||||| ||||||||| |||| | |||||| | ||||| ||||||||||| Sbjct: 2953 gatccttccatttagcagcaccttatgatg-cggagccttcaagttaagggcgaggttca 3011 Query: 66 aaagaggaaaggcttgcggtggatacctaggcacccagagacg 108 || |||||||||||| |||| |||||||||||||||||||||| Sbjct: 3012 aacgaggaaaggcttacggt-gatacctaggcacccagagacg 3053
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 91.7 bits (46), Expect = 1e-15 Identities = 137/166 (82%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 ||||||||||||| | |||||||| ||||||||| | || |||||| | |||||||||| Sbjct: 5655 ggatacctaggcatctagagacgaagaagggcgtgg-aaccgacgatacacttcggggag 5713 Query: 146 ttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctgctg 205 ||| ||| ||||||||||||| |||||||| |||||| ||||| |||| ||| ||||| Sbjct: 5714 ttggaaacaagcatagatccgaagattcccgaatagggcaaccttttatactttttgctg 5773 Query: 206 aatccatgagcaggcaagagacaacctggcgaactgaaacatctta 251 ||| ||| ||| |||||||||| | |||||||||||||||| Sbjct: 5774 aattcataggcaaaaaagagacaactcagtgaactgaaacatctta 5819
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 91.7 bits (46), Expect = 1e-15 Identities = 137/166 (82%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 86 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 145 ||||||||||||| | |||||||| ||||||||| | || |||||| | |||||||||| Sbjct: 2718 ggatacctaggcatctagagacgaagaagggcgtgg-aaccgacgatacacttcggggag 2776 Query: 146 ttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctgctg 205 ||| ||| ||||||||||||| |||||||| |||||| ||||| |||| ||| ||||| Sbjct: 2777 ttggaaacaagcatagatccgaagattcccgaatagggcaaccttttatactttttgctg 2836 Query: 206 aatccatgagcaggcaagagacaacctggcgaactgaaacatctta 251 ||| ||| ||| |||||||||| | |||||||||||||||| Sbjct: 2837 aattcataggcaaaaaagagacaactcagtgaactgaaacatctta 2882
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 91.7 bits (46), Expect = 1e-15 Identities = 145/176 (82%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 || ||| |||||||||| ||||||||| ||||||||| | || | ||||||||||||||| Sbjct: 10 ggyggagacctaggcactcagagacgaagaagggcgtggaaaccaacgaaatgcttcggg 69 Query: 143 gagttgaaaataagc-atagatccggagattcccaaataggtcaaccctttaaactgcct 201 ||| || ||| |||| ||| |||||||||||||| |||||| ||||| || ||| ||| Sbjct: 70 gagctggaaacaagctata-atccggagattcccgaatagggcaacctcttgtactacct 128 Query: 202 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 257 ||||| ||| ||| ||||||||||| || ||| |||||||||||||||||| Sbjct: 129 attgaattcatagataggaaagagacaacccggtgaattgaaacatcttagtagcc 184
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 89.7 bits (45), Expect = 4e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 |||||||||||||||| | |||||||||||||||||| | | ||||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagagacgaggaagggcgtggttaccgacgaaatgcttcggg 82 Query: 143 gagttgaaaataagcatagatccggagat 171 |||||| ||| | || |||||||||||| Sbjct: 83 gagttggaaagaggctgagatccggagat 111 Score = 83.8 bits (42), Expect = 3e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 219 gcaagagacaacctggcgaactgaaacatcttagtagccaga 260 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccaga 188
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 89.7 bits (45), Expect = 4e-15 Identities = 45/45 (100%) Strand = Plus / Plus Query: 216 caggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43316 caggcaagagacaacctggcgaactgaaacatcttagtagccaga 43360 Score = 81.8 bits (41), Expect = 1e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 216 caggcaagagacaacctggcgaactgaaacatcttagtagccaga 260 ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 40844 caggcaagagataacctggcgaactgaaacatcttagtagccaga 40888 Score = 56.0 bits (28), Expect = 6e-05 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 162 atccggagattcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggca 221 |||||||||||||| |||||||||||| || |||| |||||||||||||| ||||||| Sbjct: 63009 atccggagattcccgaataggtcaacctttcgaact-actgctgaatccatgggcaggca 62951
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 87.7 bits (44), Expect = 2e-14 Identities = 127/151 (84%), Gaps = 4/151 (2%) Strand = Plus / Plus Query: 111 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 169 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 170 attcccaaataggtcaaccctttaaactgcctgctgaatccatgagcaggcaagagacaa 229 || ||| |||||| |||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 230 cctggcgaactgaaacatcttagtagccaga 260 ||||||||||||||||||||||||||||||| Sbjct: 124 cctggcgaactgaaacatcttagtagccaga 154
>dbj|AP006418.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT23A02, TM0306, complete sequence Length = 62713 Score = 87.7 bits (44), Expect = 2e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 61 gttcaaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgta 120 ||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct: 33769 gttcaaacgaggaaaggcttatggtggatacctaggcacctagagacgaggaggggcgta 33710 Query: 121 gcaagcga 128 | |||||| Sbjct: 33709 gtaagcga 33702
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 85.7 bits (43), Expect = 6e-14 Identities = 138/169 (81%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 || ||| ||||||||| | |||||||| ||||||||| | || |||||| | ||||||| Sbjct: 3 ggyggagacctaggcatctagagacgaagaagggcgtgg-aaccgacgatacacttcggg 61 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 |||||| ||| ||||||||||||| |||||||| |||||| ||||| |||| ||| || Sbjct: 62 gagttggaaacaagcatagatccgaagattcccgaatagggcaaccttttatactttttg 121 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctta 251 |||||| ||| ||| |||||||||| | |||||||||||||||| Sbjct: 122 ctgaattcataggcaaaaaagagacaactcagtgaactgaaacatctta 170
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 85.7 bits (43), Expect = 6e-14 Identities = 142/175 (81%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 |||||||||||||||||| |||||||| ||||||||| | | |||||| | ||| |||| Sbjct: 10 ggtggatacctaggcacctagagacgaagaagggcgtcactaccgacgatacgctccggg 69 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaactgcctg 202 ||| || || ||||| | ||||||||||||||| ||| || ||||| ||| |||| Sbjct: 70 gagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccctg 129 Query: 203 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 257 |||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 130 ctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagcc 184
>emb|X97295.1|OLCHTRNIA Oenothera lamarckiana chloroplast 16S rRNA, trnI, trnA and 23S rRNA genes Length = 2599 Score = 83.8 bits (42), Expect = 3e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 6 gatctttccatttagtagcaccttaggatggcatagccttaacgttaatggcgaggttca 65 |||| |||||||||| ||||||||| |||||| |||||| | ||||| ||||||||||| Sbjct: 2518 gatccttccatttagcagcaccttatgatggcggagccttcaagttaagggcgaggttca 2577 Query: 66 aaagaggaaaggcttgcggtgg 87 || |||||||||||| |||||| Sbjct: 2578 aaggaggaaaggcttacggtgg 2599
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 81.8 bits (41), Expect = 1e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 74 aaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaa 133 ||||||| |||||||||||||||| ||||| ||| ||||||||| | | |||||||| Sbjct: 191852 aaggcttatggtggatacctaggcattcagaggcgatgaagggcgtggataccgacgaaa 191911 Query: 134 tgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 182 |||||||||||||| ||| ||||| |||||| |||||||| |||||| Sbjct: 191912 cgcttcggggagttggaaacgagcattgatccgaagattcccgaatagg 191960 Score = 81.8 bits (41), Expect = 1e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 74 aaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaa 133 ||||||| |||||||||||||||| ||||| ||| ||||||||| | | |||||||| Sbjct: 144930 aaggcttatggtggatacctaggcattcagaggcgatgaagggcgtggataccgacgaaa 144871 Query: 134 tgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 182 |||||||||||||| ||| ||||| |||||| |||||||| |||||| Sbjct: 144870 cgcttcggggagttggaaacgagcattgatccgaagattcccgaatagg 144822
>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6713 Score = 79.8 bits (40), Expect = 4e-12 Identities = 89/106 (83%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 || ||| |||||||||||||||||||| |||||||| || | || ||||| |||||||| Sbjct: 3 ggyggagacctaggcacccagagacgatgaagggcgcagataccggcgaaacgcttcggg 62 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 ||| || || ||||||||||||| |||| ||| |||||| ||||| Sbjct: 63 gagctggcaacaagcatagatccgaagatccccgaatagggcaacc 108
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 79.8 bits (40), Expect = 4e-12 Identities = 89/106 (83%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 || ||| |||||||||||||||||||| ||||||||| | || |||||||| |||||||| Sbjct: 10 ggyggagacctaggcacccagagacgaagaagggcgtggaaaccgacgaaacgcttcggg 69 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 || || ||| |||| |||||| |||||||| |||||| ||||| Sbjct: 70 aagctggaaacaagctatgatccgaagattcccgaatagggcaacc 115 Score = 50.1 bits (25), Expect = 0.003 Identities = 34/37 (91%) Strand = Plus / Plus Query: 221 aagagacaacctggcgaactgaaacatcttagtagcc 257 ||||||||||| || ||| |||||||||||||||||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagcc 184
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 79.8 bits (40), Expect = 4e-12 Identities = 89/106 (83%) Strand = Plus / Plus Query: 83 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142 || ||| ||||||||| | ||| |||| ||||||||| || ||||||||||||||||| Sbjct: 3 ggyggagacctaggcatcaagatacgatgaagggcgttataaccgacgaaatgcttcggg 62 Query: 143 gagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 ||| || |||||||| | || |||||||||||| |||||| ||||| Sbjct: 63 gagctggaaataagctttgagccggagattcccgaatagggcaacc 108 Score = 42.1 bits (21), Expect = 0.85 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 aacctggcgaactgaaacatcttagtagc 256 ||||| ||||| ||||||||||||||||| Sbjct: 148 aacctagcgaattgaaacatcttagtagc 176
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 79.8 bits (40), Expect = 4e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 82 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 141 |||||||||||||||||| |||| ||| ||||||||| | || | |||||||||||||| Sbjct: 1883 cggtggatacctaggcacttagagtcgatgaagggcgtggaaaccaacgaaatgcttcgg 1942 Query: 142 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccc 189 |||| || ||| |||| ||||||||||||||| ||| || |||||| Sbjct: 1943 ggagctggaaacaagctacgatccggagattcccgaatggggcaaccc 1990 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 228 aacctggcgaactgaaacatcttagtagccaga 260 ||||||||||| ||||||||||||||||||||| Sbjct: 2029 aacctggcgaattgaaacatcttagtagccaga 2061
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 79.8 bits (40), Expect = 4e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 82 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 141 ||||||||||||||||| | |||||||| ||||||||| | || | ||||||||||||| Sbjct: 122 cggtggatacctaggcatctagagacgatgaagggcgtggaaaccaacgaaatgcttcga 181 Query: 142 ggagttgaaaataagcatagatccggagattcccaaataggtcaacccttta 193 |||| || ||| |||| ||| ||||||||||| |||||| ||||| |||| Sbjct: 182 ggagctggaaacaagctatgattcggagattcccgaatagggcaacctttta 233
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 77.8 bits (39), Expect = 2e-11 Identities = 147/183 (80%) Strand = Plus / Minus Query: 76 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 135 |||||| |||||||||||||||| ||| ||| ||||||||| | | | |||||||| Sbjct: 27818 ggcttgtggtggatacctaggcatttagaagcgatgaagggcgtgactaccaacgaaatg 27759 Query: 136 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccctttaaa 195 ||||| |||| || || ||||| | ||| ||||| | ||| ||| | ||| ||||| | Sbjct: 27758 cttcgaggagctggaagtaagctttgattcggaggtgcccgaatgaggaaactctttata 27699 Query: 196 ctgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtag 255 || ||| |||||| ||| || ||||||||| ||| |||||||||||||||||||||||| Sbjct: 27698 ctacctactgaattcataagtaggcaagagctaacttggcgaactgaaacatcttagtag 27639 Query: 256 cca 258 ||| Sbjct: 27638 cca 27636
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 77.8 bits (39), Expect = 2e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 82 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 141 ||||||| |||||||||| ||||||||| |||||||| || | || ||| | ||||||| Sbjct: 20 cggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 142 ggagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 |||| || || |||||| ||||||||||||||| |||||| ||||| Sbjct: 80 ggagctggcaacaagcattgatccggagattcccgaatagggcaacc 126
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 77.8 bits (39), Expect = 2e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 82 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 141 ||||||| |||||||||| ||||||||| |||||||| || | || ||| | ||||||| Sbjct: 20 cggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 142 ggagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 |||| || || |||||| ||||||||||||||| |||||| ||||| Sbjct: 80 ggagctggcaacaagcattgatccggagattcccgaatagggcaacc 126
>emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL gene, exon 1 Length = 2749 Score = 77.8 bits (39), Expect = 2e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 82 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 141 ||||||| |||||||||| ||||||||| |||||||| || | || ||| | ||||||| Sbjct: 20 cggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 142 ggagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 |||| || || |||||| ||||||||||||||| |||||| ||||| Sbjct: 80 ggagctggcaacaagcattgatccggagattcccgaatagggcaacc 126
>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1 Length = 2676 Score = 77.8 bits (39), Expect = 2e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 82 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 141 ||||||| |||||||||| ||||||||| |||||||| || | || ||| | ||||||| Sbjct: 20 cggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 142 ggagttgaaaataagcatagatccggagattcccaaataggtcaacc 188 |||| || || |||||| ||||||||||||||| |||||| ||||| Sbjct: 80 ggagctggcaacaagcattgatccggagattcccgaatagggcaacc 126 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,956,329 Number of Sequences: 3902068 Number of extensions: 1956329 Number of successful extensions: 36346 Number of sequences better than 10.0: 999 Number of HSP's better than 10.0 without gapping: 1001 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 34243 Number of HSP's gapped (non-prelim): 1846 length of query: 260 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 238 effective length of database: 17,147,199,772 effective search space: 4081033545736 effective search space used: 4081033545736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
