| Clone Name | baet57g12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Minus Query: 115 tcatggagcgggagcgcctcacggcgg 141 |||||||||||||||| |||||||||| Sbjct: 7658301 tcatggagcgggagcggctcacggcgg 7658275
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 115 tcatggagcgggagcgcctcacggcgg 141 |||||||||||||||| |||||||||| Sbjct: 56989 tcatggagcgggagcggctcacggcgg 57015
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Minus Query: 115 tcatggagcgggagcgcctcacggcgg 141 |||||||||||||||| |||||||||| Sbjct: 7656136 tcatggagcgggagcggctcacggcgg 7656110
>dbj|AK119222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E03, full insert sequence Length = 2098 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 115 tcatggagcgggagcgcctcacggcgg 141 |||||||||||||||| |||||||||| Sbjct: 139 tcatggagcgggagcggctcacggcgg 165
>dbj|AK112059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A11, full insert sequence Length = 2025 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 115 tcatggagcgggagcgcctcacggcgg 141 |||||||||||||||| |||||||||| Sbjct: 139 tcatggagcgggagcggctcacggcgg 165
>dbj|AK111566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074J05, full insert sequence Length = 1556 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 115 tcatggagcgggagcgcctcacggcgg 141 |||||||||||||||| |||||||||| Sbjct: 138 tcatggagcgggagcggctcacggcgg 164
>gb|AE005864.1| Caulobacter crescentus CB15 section 190 of 359 of the complete genome Length = 8962 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 agtctgcgccggcggcggcgt 114 ||||||||||||||||||||| Sbjct: 1144 agtctgcgccggcggcggcgt 1164
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 atggagcgggagcgcctcacggcgg 141 |||||||| |||||||||||||||| Sbjct: 73347 atggagcgcgagcgcctcacggcgg 73323
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 atggagcgggagcgcctcacggcgg 141 |||||||| |||||||||||||||| Sbjct: 3640506 atggagcgcgagcgcctcacggcgg 3640482
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 atggagcgggagcgcctcacggcgg 141 |||||||| |||||||||||||||| Sbjct: 3640427 atggagcgcgagcgcctcacggcgg 3640403
>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0060G17, complete sequence Length = 174949 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ccggcggcggcgttcatgga 121 |||||||||||||||||||| Sbjct: 12919 ccggcggcggcgttcatgga 12938
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ccggcggcggcgttcatgga 121 |||||||||||||||||||| Sbjct: 108104 ccggcggcggcgttcatgga 108123
>emb|AJ006468.1|MAAJ6468 Metarhizium anisopliae nrr1 gene Length = 4733 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 81 tcgagatccatggagtctgcgccggcggcggc 112 ||||||| ||||| ||| |||||||||||||| Sbjct: 1267 tcgagattcatggcgtccgcgccggcggcggc 1236
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccggcggcggcgttcatg 119 |||||||||||||||||||| Sbjct: 3538964 cgccggcggcggcgttcatg 3538945
>gb|AC023742.4| Drosophila melanogaster X BAC RP98-43C24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172203 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gctgcccagcatcatcatca 208 |||||||||||||||||||| Sbjct: 136923 gctgcccagcatcatcatca 136942
>ref|NM_080331.2| Drosophila melanogaster bifid CG3578-RA (bi), mRNA Length = 4060 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gctgcccagcatcatcatca 208 |||||||||||||||||||| Sbjct: 3060 gctgcccagcatcatcatca 3079
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ccggcggcggcgttcatgga 121 |||||||||||||||||||| Sbjct: 7923329 ccggcggcggcgttcatgga 7923348
>gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 of 74 of the complete sequence Length = 310993 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gctgcccagcatcatcatca 208 |||||||||||||||||||| Sbjct: 93991 gctgcccagcatcatcatca 94010
>gb|M81796.1|DROOPTBA Drosophila melanogaster optomotor-blind mRNA, complete cds Length = 4069 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gctgcccagcatcatcatca 208 |||||||||||||||||||| Sbjct: 3066 gctgcccagcatcatcatca 3085 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,705,212 Number of Sequences: 3902068 Number of extensions: 1705212 Number of successful extensions: 115675 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114966 Number of HSP's gapped (non-prelim): 709 length of query: 210 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 188 effective length of database: 17,147,199,772 effective search space: 3223673557136 effective search space used: 3223673557136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)