ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet57g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MKNK2_XENTR (Q66I46) MAP kinase-interacting serine/threonine-pro... 29 3.2
2P2RY2_RAT (P41232) P2Y purinoceptor 2 (P2Y2) (P2U purinoceptor 1... 28 9.3
3MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor (... 28 9.3

>MKNK2_XENTR (Q66I46) MAP kinase-interacting serine/threonine-protein kinase 2|
           (EC 2.7.11.1) (MAP kinase signal-integrating kinase 2)
           (Mnk2)
          Length = 466

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +3

Query: 9   SIQHSRPSEPTLGARTHGSHGGVGAFDPARLL 104
           S+Q S PSE  L  R HGS GG+     A LL
Sbjct: 431 SMQLSPPSESKLAKRRHGSKGGISPPSLAPLL 462



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>P2RY2_RAT (P41232) P2Y purinoceptor 2 (P2Y2) (P2U purinoceptor 1) (P2U1) (ATP|
           receptor) (Purinergic receptor)
          Length = 374

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 34  SLLWEHARMARMGASVLSILLASC 105
           SL W HAR AR  A+V+ +L+ +C
Sbjct: 141 SLSWGHARYARRVAAVVWVLVLAC 164



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>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 24  RPSEPTLGARTHGSHGGVGAFDPA-RLLRPAAAS 122
           RP EP+ G  T  S GG G   P+   LRP  +S
Sbjct: 483 RPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSS 516


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,903,003
Number of Sequences: 219361
Number of extensions: 245694
Number of successful extensions: 924
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 80,573,946
effective HSP length: 16
effective length of database: 77,064,170
effective search space used: 1849540080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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