ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet57f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome... 103 4e-19
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 103 4e-19
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 103 4e-19
4gb|BT019022.1| Zea mays clone Contig523.F mRNA sequence 82 1e-12
5dbj|AK110777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
6gb|AC010090.7| Homo sapiens BAC clone RP11-294G19 from 2, comple... 46 0.079
7dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 46 0.079
8dbj|AK103706.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.079
9dbj|AK071935.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.079
10gb|AC011825.13| Homo sapiens chromosome 18, clone RP11-53I6, com... 44 0.31
11ref|NM_196979.1| Oryza sativa (japonica cultivar-group) putative... 42 1.2
12gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 gen... 42 1.2
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
14gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 42 1.2
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
16ref|XM_450785.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.9
17ref|XM_506660.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.9
18ref|XM_360296.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 4.9
19gb|AY293730.1| Triticum aestivum alpha-gliadin gene, promoter re... 40 4.9
20emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 4.9
21emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 4.9
22dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.9
23gb|AC015729.10| Homo sapiens, clone RP11-1A20, complete sequence 40 4.9
24dbj|AK089342.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 4.9
25dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
26dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
27gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.9
28dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
29emb|AL928977.10| Zebrafish DNA sequence from clone DKEY-24D19 in... 40 4.9
30dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
31dbj|AK105910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
32dbj|AK100548.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
33dbj|AK100032.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
34emb|AL512360.2|CNS07EF9 Human chromosome 14 DNA sequence BAC R-7... 40 4.9
35gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cyt... 40 4.9
36emb|AL358336.4|CNS05TE7 Human chromosome 14 DNA sequence BAC R-5... 40 4.9
37gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 4.9
38emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chr... 40 4.9
39gb|U08287.1|TAU08287 Triticum aestivum Cheyenne alpha-gliadin ge... 40 4.9 
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0055D24 map C535, complete sequence
          Length = 174759

 Score =  103 bits (52), Expect = 4e-19
 Identities = 100/116 (86%)
 Strand = Plus / Plus

                                                                         
Query: 252   aggatgcatataaagtttggtcagagtcttttggtatgtatccattacccctggtaaaga 311
             ||||||| |||||||||||||  ||||||||||| |||||||| ||||| ||||||| ||
Sbjct: 59318 aggatgcctataaagtttggttggagtcttttggcatgtatcctttacctctggtaagga 59377

                                                                     
Query: 312   gagtgaaacttttttggagctcattaaaaagctggatttctgaaaacttccctgaa 367
             |||||||| |||| ||||| ||  | || |||||| | ||||||||||||||||||
Sbjct: 59378 gagtgaaaattttctggagttcgctgaagagctggctgtctgaaaacttccctgaa 59433
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  103 bits (52), Expect = 4e-19
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                           
Query: 252     aggatgcatataaagtttggtcagagtcttttggtatgtatccattacccctggtaaaga 311
               ||||||| |||||||||||||  ||||||||||| |||||||| ||||| ||||||| ||
Sbjct: 8958909 aggatgcctataaagtttggttggagtcttttggcatgtatcctttacctctggtaagga 8958850

                                                                       
Query: 312     gagtgaaacttttttggagctcattaaaaagctggatttctgaaaacttccctgaa 367
               |||||||| |||| ||||| ||  | || |||||| | ||||||||||||||||||
Sbjct: 8958849 gagtgaaaattttctggagttcgctgaagagctggctgtctgaaaacttccctgaa 8958794
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  103 bits (52), Expect = 4e-19
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                           
Query: 252     aggatgcatataaagtttggtcagagtcttttggtatgtatccattacccctggtaaaga 311
               ||||||| |||||||||||||  ||||||||||| |||||||| ||||| ||||||| ||
Sbjct: 9030572 aggatgcctataaagtttggttggagtcttttggcatgtatcctttacctctggtaagga 9030513

                                                                       
Query: 312     gagtgaaacttttttggagctcattaaaaagctggatttctgaaaacttccctgaa 367
               |||||||| |||| ||||| ||  | || |||||| | ||||||||||||||||||
Sbjct: 9030512 gagtgaaaattttctggagttcgctgaagagctggctgtctgaaaacttccctgaa 9030457
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>gb|BT019022.1| Zea mays clone Contig523.F mRNA sequence
          Length = 1556

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 101/121 (83%)
 Strand = Plus / Plus

                                                                       
Query: 197 gacctcggcctcgacgcgcccctcgaccccgaggaccgcccgctcccctctttcaaggat 256
           ||||| || |||||||| ||| |||| || |||| ||| || || ||||| ||| ||| |
Sbjct: 265 gacctggggctcgacgctcccgtcgatccagagggccggcctcttccctccttccaggtt 324

                                                                       
Query: 257 gcatataaagtttggtcagagtcttttggtatgtatccattacccctggtaaagagagtg 316
           ||||||||||||||||| ||||||||||| ||||| ||  ||||  ||||||||||||||
Sbjct: 325 gcatataaagtttggtcggagtcttttggcatgtaccctctacctatggtaaagagagtg 384

            
Query: 317 a 317
           |
Sbjct: 385 a 385
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>dbj|AK110777.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-B07, full
           insert sequence
          Length = 1256

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 81/99 (81%)
 Strand = Plus / Plus

                                                                       
Query: 174 tctggcgcagcttctgctcccgagacctcggcctcgacgcgcccctcgaccccgaggacc 233
           ||||||||  ||||||||||   ||| ||| ||||||||| |||||||  ||||  ||||
Sbjct: 231 tctggcgccacttctgctccgacgacttcgccctcgacgcccccctcgctcccggcgacc 290

                                                  
Query: 234 gcccgctcccctctttcaaggatgcatataaagtttggt 272
            ||| ||||| |||||||||||||| || |||| |||||
Sbjct: 291 tccctctcccttctttcaaggatgcttacaaagcttggt 329
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>gb|AC010090.7| Homo sapiens BAC clone RP11-294G19 from 2, complete sequence
          Length = 115597

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 332    tcattaaaaagctggatttctgaaaac 358
              ||||||||| |||||||||||||||||
Sbjct: 111497 tcattaaaatgctggatttctgaaaac 111471
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 339     aaagctggatttctgaaaacttc 361
               |||||||||||||||||||||||
Sbjct: 1587881 aaagctggatttctgaaaacttc 1587903
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>dbj|AK103706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136N20, full
           insert sequence
          Length = 1679

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 128/163 (78%)
 Strand = Plus / Plus

                                                                       
Query: 174 tctggcgcagcttctgctcccgagacctcggcctcgacgcgcccctcgaccccgaggacc 233
           ||||||||  ||||||||||   ||| ||| ||||||||| |||||||  ||||  ||||
Sbjct: 254 tctggcgccacttctgctccgacgacttcgccctcgacgcccccctcgctcccggcgacc 313

                                                                       
Query: 234 gcccgctcccctctttcaaggatgcatataaagtttggtcagagtcttttggtatgtatc 293
            ||| ||||| || ||||||||||| || |||| |||||   | |||||||| ||||| |
Sbjct: 314 tccctctcccttccttcaaggatgcttacaaagcttggttccaatcttttgggatgtacc 373

                                                      
Query: 294 cattacccctggtaaagagagtgaaacttttttggagctcatt 336
           | || || || || ||||| |||||  | || |||||||||||
Sbjct: 374 ctttgccacttgttaagagggtgaagatcttctggagctcatt 416
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>dbj|AK071935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078F24, full
           insert sequence
          Length = 1604

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 80/99 (80%)
 Strand = Plus / Plus

                                                                       
Query: 174 tctggcgcagcttctgctcccgagacctcggcctcgacgcgcccctcgaccccgaggacc 233
           ||||||||  ||||||||||   ||| ||| ||||||||| |||||||  ||||  ||||
Sbjct: 256 tctggcgccacttctgctccgacgacttcgccctcgacgcccccctcgctcccggcgacc 315

                                                  
Query: 234 gcccgctcccctctttcaaggatgcatataaagtttggt 272
            ||| ||||| || ||||||||||| || |||| |||||
Sbjct: 316 tccctctcccttccttcaaggatgcttacaaagcttggt 354
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>gb|AC011825.13| Homo sapiens chromosome 18, clone RP11-53I6, complete sequence
          Length = 176222

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 306   taaagagagtgaaacttttttg 327
             ||||||||||||||||||||||
Sbjct: 31389 taaagagagtgaaacttttttg 31368
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>ref|NM_196979.1| Oryza sativa (japonica cultivar-group) putative alcohol oxidase
            (OSJNBa0001K12.13), mRNA
          Length = 2271

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 23   tcgccgccgacggggcccgcggcgc 47
            ||||||||||||| |||||||||||
Sbjct: 1763 tcgccgccgacggtgcccgcggcgc 1739
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>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete
             sequence
          Length = 144724

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 23    tcgccgccgacggggcccgcggcgc 47
             ||||||||||||| |||||||||||
Sbjct: 87605 tcgccgccgacggtgcccgcggcgc 87581
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 23       tcgccgccgacggggcccgcggcgc 47
                ||||||||||||| |||||||||||
Sbjct: 17104731 tcgccgccgacggtgcccgcggcgc 17104755
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>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 341   agctggatttctgaaaacttc 361
             |||||||||||||||||||||
Sbjct: 49434 agctggatttctgaaaacttc 49414
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 23       tcgccgccgacggggcccgcggcgc 47
                ||||||||||||| |||||||||||
Sbjct: 17113771 tcgccgccgacggtgcccgcggcgc 17113795
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>ref|XM_450785.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2464

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 30  cgacggggcccgcggcgccggcgg 53
           ||||||||||||||||| ||||||
Sbjct: 584 cgacggggcccgcggcgtcggcgg 561
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>ref|XM_506660.1| PREDICTED Oryza sativa (japonica cultivar-group), P0027G10.24 mRNA
          Length = 2699

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 30  cgacggggcccgcggcgccggcgg 53
           ||||||||||||||||| ||||||
Sbjct: 584 cgacggggcccgcggcgtcggcgg 561
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>ref|XM_360296.1| Magnaporthe grisea 70-15 hypothetical protein (MG05670.4) partial
           mRNA
          Length = 831

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 205 cctcgacgcgcccctcgaccccga 228
           |||||||| |||||||||||||||
Sbjct: 456 cctcgacgggcccctcgaccccga 479
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>gb|AY293730.1| Triticum aestivum alpha-gliadin gene, promoter region and 5' UTR
          Length = 1335

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 256 tgcatataaagtttggtcagagtc 279
           ||||||||||||||||||| ||||
Sbjct: 347 tgcatataaagtttggtcaaagtc 370
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     aaaaagctggatttctgaaa 356
               ||||||||||||||||||||
Sbjct: 1173756 aaaaagctggatttctgaaa 1173737
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>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14
          Length = 343050

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 21     cttcgccgccgacggggcccgcggcgccggcgggtt 56
              ||||| ||||| ||||| | ||||||||||||||||
Sbjct: 333753 cttcggcgccgccggggtcggcggcgccggcgggtt 333718
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    ccgaggacgccgtctggcgcagct 185
              ||||||| ||||||||||||||||
Sbjct: 854568 ccgaggatgccgtctggcgcagct 854591
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>gb|AC015729.10| Homo sapiens, clone RP11-1A20, complete sequence
          Length = 153392

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   aaagctggatttctgaaaac 358
             ||||||||||||||||||||
Sbjct: 58784 aaagctggatttctgaaaac 58803
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>dbj|AK089342.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
          full-length enriched library, clone:F730011B02
          product:hypothetical protein, full insert sequence
          Length = 2232

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 21 cttcgccgccgacggggccc 40
          ||||||||||||||||||||
Sbjct: 25 cttcgccgccgacggggccc 6
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 30       cgacggggcccgcggcgccggcgg 53
                ||||||||||||||||| ||||||
Sbjct: 12750910 cgacggggcccgcggcgtcggcgg 12750933
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 24      cgccgccgacggggcccgcggcgc 47
               ||||||||||| ||||||||||||
Sbjct: 1829044 cgccgccgacgtggcccgcggcgc 1829067
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 216     ccctcgaccccgaggaccgc 235
               ||||||||||||||||||||
Sbjct: 4739266 ccctcgaccccgaggaccgc 4739285
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>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0027G10
          Length = 184759

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    cgacggggcccgcggcgccggcgg 53
             ||||||||||||||||| ||||||
Sbjct: 58687 cgacggggcccgcggcgtcggcgg 58710
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>emb|AL928977.10| Zebrafish DNA sequence from clone DKEY-24D19 in linkage group 20,
              complete sequence
          Length = 165014

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 338    aaaagctggatttctgaaaacttc 361
              ||||||| ||||||||||||||||
Sbjct: 103425 aaaagcttgatttctgaaaacttc 103402
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585B01
          Length = 133231

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    cgccgccgacggggcccgcggcgc 47
             ||||||||||| ||||||||||||
Sbjct: 65688 cgccgccgacgtggcccgcggcgc 65711
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>dbj|AK105910.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-G09, full
           insert sequence
          Length = 1512

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 30  cgacggggcccgcggcgccggcgg 53
           ||||||||||||||||| ||||||
Sbjct: 583 cgacggggcccgcggcgtcggcgg 560
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>dbj|AK100548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103B19, full
           insert sequence
          Length = 2465

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 30  cgacggggcccgcggcgccggcgg 53
           ||||||||||||||||| ||||||
Sbjct: 584 cgacggggcccgcggcgtcggcgg 561
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>dbj|AK100032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148H21, full
           insert sequence
          Length = 2699

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 30  cgacggggcccgcggcgccggcgg 53
           ||||||||||||||||| ||||||
Sbjct: 584 cgacggggcccgcggcgtcggcgg 561
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>emb|AL512360.2|CNS07EF9 Human chromosome 14 DNA sequence BAC R-737F10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192972

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   aaagctggatttctgaaaac 358
             ||||||||||||||||||||
Sbjct: 39236 aaagctggatttctgaaaac 39217
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>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4,
             cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS
             (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO
             (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK
             (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG
             (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC
             (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB
             (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF
             (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ
             (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN
             (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ),
             MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV
             (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY
             (mmcY) genes, complete cds; and unknown genes
          Length = 63734

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    tcgccgccgacggggcccgcggcg 46
             |||||||||||||||| |||||||
Sbjct: 52962 tcgccgccgacggggcgcgcggcg 52985
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>emb|AL358336.4|CNS05TE7 Human chromosome 14 DNA sequence BAC R-514D2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177669

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   aaagctggatttctgaaaac 358
             ||||||||||||||||||||
Sbjct: 10980 aaagctggatttctgaaaac 10999
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 336     taaaaagctggatttctgaaaact 359
               |||||||||||||||||| |||||
Sbjct: 1685162 taaaaagctggatttctgtaaact 1685139
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>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete
              sequence
          Length = 230186

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     cttcgccgccgacggggccc 40
              ||||||||||||||||||||
Sbjct: 165145 cttcgccgccgacggggccc 165126
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>gb|U08287.1|TAU08287 Triticum aestivum Cheyenne alpha-gliadin gene, complete cds
          Length = 6115

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 256  tgcatataaagtttggtcagagtc 279
            ||||||||||||||||||| ||||
Sbjct: 1842 tgcatataaagtttggtcaaagtc 1865


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,837,154
Number of Sequences: 3902068
Number of extensions: 2837154
Number of successful extensions: 146432
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145738
Number of HSP's gapped (non-prelim): 693
length of query: 367
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 345
effective length of database: 17,147,199,772
effective search space: 5915783921340
effective search space used: 5915783921340
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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