>AB1IP_MOUSE (Q8R5A3) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
           (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich
           protein 48)
          Length = 670

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -1

Query: 142 PGPPAGSRGTCSPRRPPTKPWL---LTRSS*LCPPRPL 38
           P PPA    +  P  PP  P L   +T+SS L P +PL
Sbjct: 595 PPPPAAVEDSALPPPPPPPPCLSQEITKSSPLPPKKPL 632

>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 39  KGRGGQS*EERVSSHGFVGGRRGEHVPRDPAGGPG 143
           KG GG      ++      G RGEH P  PAG PG
Sbjct: 778 KGEGGSPGLPGIAGPRGGPGERGEHGPPGPAGFPG 812

>FHOD1_MOUSE (Q6P9Q4) FH1/FH2 domain-containing protein (Formin homolog|
           overexpressed in spleen) (FHOS) (Formin homology 2
           domain-containing protein 1)
          Length = 1196

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = -1

Query: 142 PGPPAGSRGTCSPRRPPTKPWLLTRSS*LCPPRP 41
           P PP    G+C P  PP  P   T S   CPP P
Sbjct: 590 PPPPPPITGSCPPPPPPPLPPPATGS---CPPPP 620

>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 39  KGRGGQS*EERVSSHGFVGGRRGEHVPRDPAGGPG 143
           KG GG      ++      G RGEH P  PAG PG
Sbjct: 778 KGEGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPG 812


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.134    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,780,231
Number of Sequences: 219361
Number of extensions: 271054
Number of successful extensions: 969
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 80,573,946
effective HSP length: 23
effective length of database: 75,528,643
effective search space used: 1812687432
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)