ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet57e07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds Length = 948 Score = 248 bits (125), Expect = 4e-63 Identities = 140/145 (96%) Strand = Plus / Plus Query: 6 ccaccgacgcctcccccttcgacgtcgacctcaacgtcaccgacgccaccaagtactggg 65 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 127 ccaccgacccctcccccttcgacgtcgacctcaacgccaccgacgccaccaagtactggg 186 Query: 66 gaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggccccgacg 125 | ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 187 gcccctggaccccggccagggcgacttggtacggccagcccaacggcgccggccccgacg 246 Query: 126 acaacggtggtgcctgcggcttcaa 150 ||||||||||||||||||||||||| Sbjct: 247 acaacggtggtgcctgcggcttcaa 271
>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4 (OSJNBa0010C11.2), mRNA Length = 1340 Score = 111 bits (56), Expect = 6e-22 Identities = 83/92 (90%) Strand = Plus / Plus Query: 59 tactggggaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct: 258 tactggggcccctggaccaaggccagggccacctggtacggccagcccaacggcgccggc 317 Query: 119 cccgacgacaacggtggtgcctgcggcttcaa 150 |||||||||||||| || || ||||| ||||| Sbjct: 318 cccgacgacaacggcggcgcgtgcgggttcaa 349
>gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete cds Length = 1249 Score = 111 bits (56), Expect = 6e-22 Identities = 83/92 (90%) Strand = Plus / Plus Query: 59 tactggggaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct: 214 tactggggcccctggaccaaggccagggccacctggtacggccagcccaacggcgccggc 273 Query: 119 cccgacgacaacggtggtgcctgcggcttcaa 150 |||||||||||||| || || ||||| ||||| Sbjct: 274 cccgacgacaacggcggcgcgtgcgggttcaa 305
>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full insert sequence Length = 1290 Score = 111 bits (56), Expect = 6e-22 Identities = 83/92 (90%) Strand = Plus / Plus Query: 59 tactggggaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct: 271 tactggggcccctggaccaaggccagggccacctggtacggccagcccaacggcgccggc 330 Query: 119 cccgacgacaacggtggtgcctgcggcttcaa 150 |||||||||||||| || || ||||| ||||| Sbjct: 331 cccgacgacaacggcggcgcgtgcgggttcaa 362
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full insert sequence Length = 1266 Score = 111 bits (56), Expect = 6e-22 Identities = 83/92 (90%) Strand = Plus / Plus Query: 59 tactggggaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct: 264 tactggggcccctggaccaaggccagggccacctggtacggccagcccaacggcgccggc 323 Query: 119 cccgacgacaacggtggtgcctgcggcttcaa 150 |||||||||||||| || || ||||| ||||| Sbjct: 324 cccgacgacaacggcggcgcgtgcgggttcaa 355
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full insert sequence Length = 1475 Score = 111 bits (56), Expect = 6e-22 Identities = 83/92 (90%) Strand = Plus / Plus Query: 59 tactggggaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct: 452 tactggggcccctggaccaaggccagggccacctggtacggccagcccaacggcgccggc 511 Query: 119 cccgacgacaacggtggtgcctgcggcttcaa 150 |||||||||||||| || || ||||| ||||| Sbjct: 512 cccgacgacaacggcggcgcgtgcgggttcaa 543
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full insert sequence Length = 1794 Score = 111 bits (56), Expect = 6e-22 Identities = 83/92 (90%) Strand = Plus / Plus Query: 59 tactggggaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct: 270 tactggggcccctggaccaaggccagggccacctggtacggccagcccaacggcgccggc 329 Query: 119 cccgacgacaacggtggtgcctgcggcttcaa 150 |||||||||||||| || || ||||| ||||| Sbjct: 330 cccgacgacaacggcggcgcgtgcgggttcaa 361
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full insert sequence Length = 1293 Score = 111 bits (56), Expect = 6e-22 Identities = 83/92 (90%) Strand = Plus / Plus Query: 59 tactggggaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct: 270 tactggggcccctggaccaaggccagggccacctggtacggccagcccaacggcgccggc 329 Query: 119 cccgacgacaacggtggtgcctgcggcttcaa 150 |||||||||||||| || || ||||| ||||| Sbjct: 330 cccgacgacaacggcggcgcgtgcgggttcaa 361
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 109 bits (55), Expect = 2e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 59 tactggggaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct: 15139 tactggggcccctggaccaaggccagggccacctggtacggccagcccaacggcgccggc 15198 Query: 119 cccgacgacaacggt 133 ||||||||||||||| Sbjct: 15199 cccgacgacaacggt 15213 Score = 40.1 bits (20), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgac 127 |||||||| |||||||||||| |||| ||||||||||| |||||| Sbjct: 5320 gccagggccacctggtacggcgctcccaccggcgccggccctgacgac 5273
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 109 bits (55), Expect = 2e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 59 tactggggaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct: 21340126 tactggggcccctggaccaaggccagggccacctggtacggccagcccaacggcgccggc 21340185 Query: 119 cccgacgacaacggt 133 ||||||||||||||| Sbjct: 21340186 cccgacgacaacggt 21340200 Score = 85.7 bits (43), Expect = 3e-14 Identities = 55/59 (93%) Strand = Plus / Minus Query: 76 cccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtg 134 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 21318313 cccggccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggtg 21318255 Score = 46.1 bits (23), Expect = 0.030 Identities = 26/27 (96%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagccc 106 |||||||| |||||||||||||||||| Sbjct: 20946034 gccagggccacctggtacggccagccc 20946060 Score = 42.1 bits (21), Expect = 0.46 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 ggcgccggccccgacgacaacggtg 134 ||||||||||| ||||||||||||| Sbjct: 21312236 ggcgccggccctgacgacaacggtg 21312212 Score = 40.1 bits (20), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgac 127 |||||||| |||||||||||| |||| ||||||||||| |||||| Sbjct: 21330306 gccagggccacctggtacggcgctcccaccggcgccggccctgacgac 21330259
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 109 bits (55), Expect = 2e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 59 tactggggaccctggaccccggccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct: 21351389 tactggggcccctggaccaaggccagggccacctggtacggccagcccaacggcgccggc 21351448 Query: 119 cccgacgacaacggt 133 ||||||||||||||| Sbjct: 21351449 cccgacgacaacggt 21351463 Score = 85.7 bits (43), Expect = 3e-14 Identities = 55/59 (93%) Strand = Plus / Minus Query: 76 cccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtg 134 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 21329577 cccggccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggtg 21329519 Score = 46.1 bits (23), Expect = 0.030 Identities = 26/27 (96%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagccc 106 |||||||| |||||||||||||||||| Sbjct: 20957298 gccagggccacctggtacggccagccc 20957324 Score = 42.1 bits (21), Expect = 0.46 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 ggcgccggccccgacgacaacggtg 134 ||||||||||| ||||||||||||| Sbjct: 21323500 ggcgccggccctgacgacaacggtg 21323476 Score = 40.1 bits (20), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgac 127 |||||||| |||||||||||| |||| ||||||||||| |||||| Sbjct: 21341570 gccagggccacctggtacggcgctcccaccggcgccggccctgacgac 21341523
>gb|AY107405.1| Zea mays PCO140045 mRNA sequence Length = 624 Score = 103 bits (52), Expect = 1e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 79 ggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgc 138 |||| |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 241 ggcccgggccacctggtacggccagcccaacggcgccggcccggacgacaacggtggtgc 300 Query: 139 ctgcggcttcaa 150 ||||||||||| Sbjct: 301 gtgcggcttcaa 312
>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds Length = 1479 Score = 95.6 bits (48), Expect = 4e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 79 ggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgc 138 |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 251 ggcccgggccacctggtacggccagcccaacggcgccggccccgacgacaacggtggcgc 310 Query: 139 ctgcggcttcaa 150 ||||| ||||| Sbjct: 311 gtgcggattcaa 322
>ref|NM_197699.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB2 (OSJNBb0014I11.2), mRNA Length = 1262 Score = 93.7 bits (47), Expect = 1e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 76 cccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtgg 135 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||| || Sbjct: 165 cccggccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggcgg 224 Query: 136 tgcctgcggcttcaa 150 ||| ||||| ||||| Sbjct: 225 tgcgtgcgggttcaa 239
>gb|U95968.1|OSU95968 Oryza sativa beta-expansin (EXPB2) mRNA, complete cds Length = 999 Score = 93.7 bits (47), Expect = 1e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 76 cccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtgg 135 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||| || Sbjct: 165 cccggccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggcgg 224 Query: 136 tgcctgcggcttcaa 150 ||| ||||| ||||| Sbjct: 225 tgcgtgcgggttcaa 239
>dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F04, full insert sequence Length = 1043 Score = 93.7 bits (47), Expect = 1e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 76 cccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtgg 135 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||| || Sbjct: 164 cccggccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggcgg 223 Query: 136 tgcctgcggcttcaa 150 ||| ||||| ||||| Sbjct: 224 tgcgtgcgggttcaa 238
>dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C01, full insert sequence Length = 1259 Score = 93.7 bits (47), Expect = 1e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 76 cccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtgg 135 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||| || Sbjct: 162 cccggccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggcgg 221 Query: 136 tgcctgcggcttcaa 150 ||| ||||| ||||| Sbjct: 222 tgcgtgcgggttcaa 236
>dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F11, full insert sequence Length = 1026 Score = 93.7 bits (47), Expect = 1e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 76 cccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtgg 135 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||| || Sbjct: 155 cccggccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggcgg 214 Query: 136 tgcctgcggcttcaa 150 ||| ||||| ||||| Sbjct: 215 tgcgtgcgggttcaa 229
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 85.7 bits (43), Expect = 3e-14 Identities = 55/59 (93%) Strand = Plus / Plus Query: 76 cccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtg 134 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 16046 cccggccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggtg 16104 Score = 42.1 bits (21), Expect = 0.46 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ggcgccggccccgacgacaacggtg 134 ||||||||||| ||||||||||||| Sbjct: 22123 ggcgccggccctgacgacaacggtg 22147 Score = 40.1 bits (20), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgac 127 |||||||| |||||||||||| |||| ||||||||||| |||||| Sbjct: 4053 gccagggccacctggtacggcgctcccaccggcgccggccctgacgac 4100
>gb|AY589582.1| Triticum aestivum beta-expansin TaEXPB5 mRNA, complete cds Length = 939 Score = 85.7 bits (43), Expect = 3e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 171 gccaaggccacctggtacggggcgcccaacggcgccggccccgacgacaacggtggtgct 230 Query: 140 tgcggcttcaa 150 ||||||||||| Sbjct: 231 tgcggcttcaa 241
>gb|U91981.1|TAU91981 Triticum aestivum pollen allergen homolog mRNA, complete cds Length = 1232 Score = 85.7 bits (43), Expect = 3e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 176 gccaaggccacctggtacggagcgcccaacggcgccggccccgacgacaacggtggtgct 235 Query: 140 tgcggcttcaa 150 ||||||||||| Sbjct: 236 tgcggcttcaa 246
>gb|AY543544.1| Triticum aestivum expansin EXPB10 mRNA, complete cds Length = 1132 Score = 85.7 bits (43), Expect = 3e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 146 gccaaggccacctggtacggggcgcccaacggcgccggccccgacgacaacggtggtgct 205 Query: 140 tgcggcttcaa 150 ||||||||||| Sbjct: 206 tgcggcttcaa 216
>gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, complete cds Length = 1034 Score = 77.8 bits (39), Expect = 8e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 84 gggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcctgcg 143 |||| |||||||||||| |||||||||||||||||| |||||||||||||||| |||| Sbjct: 267 gggccacctggtacggcgctcccaatggcgccggcccctacgacaacggtggtgcttgcg 326 Query: 144 gcttcaa 150 | ||||| Sbjct: 327 ggttcaa 333
>gb|AY104151.1| Zea mays PCO112411 mRNA sequence Length = 1171 Score = 77.8 bits (39), Expect = 8e-12 Identities = 63/71 (88%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||| ||| |||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 249 gccaaggccacctggtacggcgcgcccaccggcgccggccccgacgacaacggtggtgcg 308 Query: 140 tgcggcttcaa 150 ||||| ||||| Sbjct: 309 tgcgggttcaa 319
>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds Length = 1013 Score = 75.8 bits (38), Expect = 3e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 77 ccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggt 136 |||||||| |||||||||||||| |||||| |||||||| |||||||||||||| || Sbjct: 185 ccggccagagcgacctggtacggagcgcccaacggcgccgggcccgacgacaacggcggc 244 Query: 137 gcctgcggcttcaa 150 || ||||||||||| Sbjct: 245 gcgtgcggcttcaa 258
>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds Length = 1056 Score = 75.8 bits (38), Expect = 3e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 77 ccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggt 136 |||||||| |||||||||||||| |||||| |||||||| |||||||||||||| || Sbjct: 217 ccggccagagcgacctggtacggagcgcccaacggcgccgggcccgacgacaacggcggc 276 Query: 137 gcctgcggcttcaa 150 || ||||||||||| Sbjct: 277 gcgtgcggcttcaa 290
>emb|AJ295940.1|FPR295940 Festuca pratensis mRNA for beta expansin B1 (expB1 gene) Length = 1224 Score = 61.9 bits (31), Expect = 5e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgc 138 |||| ||| |||||||||||| ||||||| ||||||||||||||| || ||||||||| Sbjct: 168 gccaaggccacctggtacggcaagcccaacggcgccggccccgacaacggcggtggtgc 226
>gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA, complete cds Length = 897 Score = 61.9 bits (31), Expect = 5e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||| |||| ||||||||||| |||||| | ||||||||| Sbjct: 161 gccagggccacctggtacggcgcccccaccggcgccggccctgacgacgaaggtggtgcc 220 Query: 140 tgcggcttcaa 150 ||||| ||||| Sbjct: 221 tgcgggttcaa 231
>gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, complete cds Length = 834 Score = 61.9 bits (31), Expect = 5e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||| |||| ||||||||||| |||||| | ||||||||| Sbjct: 140 gccagggccacctggtacggcgcccccaccggcgccggccctgacgacgatggtggtgcc 199 Query: 140 tgcggcttcaa 150 ||||| ||||| Sbjct: 200 tgcgggttcaa 210
>gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, complete cds Length = 810 Score = 61.9 bits (31), Expect = 5e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||| |||| ||||||||||| |||||| | ||||||||| Sbjct: 134 gccagggccacctggtacggcgcccccaccggcgccggccctgacgacgatggtggtgcc 193 Query: 140 tgcggcttcaa 150 ||||| ||||| Sbjct: 194 tgcgggttcaa 204
>gb|AF332179.1|AF332179 Zea mays beta-expansin 6 (expB6) mRNA, complete cds Length = 1142 Score = 60.0 bits (30), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 77 ccggccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggt 136 ||||||| ||| |||||||||||| |||| |||||||||||| ||||||||||||| Sbjct: 237 ccggccaaggccacctggtacggcgcccccaccggcgccggccccctcgacaacggtggt 296 Query: 137 gcctgcggcttcaa 150 || ||||| ||||| Sbjct: 297 gcgtgcgggttcaa 310
>ref|NM_187642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 804 Score = 56.0 bits (28), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 89 acctggtacggccagcccaatggcgccggccccgacgacaacgg 132 |||||||||||| |||| || || |||||||||||||||||||| Sbjct: 139 acctggtacggcaagccaaagggtgccggccccgacgacaacgg 182
>gb|AF391111.1| Oryza sativa beta-expansin OsEXPB10 (EXPB10) gene, complete cds Length = 4216 Score = 56.0 bits (28), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 89 acctggtacggccagcccaatggcgccggccccgacgacaacgg 132 |||||||||||| |||| || || |||||||||||||||||||| Sbjct: 2120 acctggtacggcaagccaaagggtgccggccccgacgacaacgg 2163
>gb|AF261278.1| Oryza sativa beta-expansin (EXPB10) mRNA, complete cds Length = 1044 Score = 56.0 bits (28), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 89 acctggtacggccagcccaatggcgccggccccgacgacaacgg 132 |||||||||||| |||| || || |||||||||||||||||||| Sbjct: 147 acctggtacggcaagccaaagggtgccggccccgacgacaacgg 190
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 56.0 bits (28), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 89 acctggtacggccagcccaatggcgccggccccgacgacaacgg 132 |||||||||||| |||| || || |||||||||||||||||||| Sbjct: 375860 acctggtacggcaagccaaagggtgccggccccgacgacaacgg 375903 Score = 38.2 bits (19), Expect = 7.2 Identities = 40/47 (85%) Strand = Plus / Plus Query: 86 gcgacctggtacggccagcccaatggcgccggccccgacgacaacgg 132 ||||||||||||||| ||||| ||||| || || ||||||||||| Sbjct: 168188 gcgacctggtacggcgctcccaacggcgctgggccggacgacaacgg 168234
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 56.0 bits (28), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 89 acctggtacggccagcccaatggcgccggccccgacgacaacgg 132 |||||||||||| |||| || || |||||||||||||||||||| Sbjct: 103388 acctggtacggcaagccaaagggtgccggccccgacgacaacgg 103431
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 56.0 bits (28), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 89 acctggtacggccagcccaatggcgccggccccgacgacaacgg 132 |||||||||||| |||| || || |||||||||||||||||||| Sbjct: 375858 acctggtacggcaagccaaagggtgccggccccgacgacaacgg 375901 Score = 38.2 bits (19), Expect = 7.2 Identities = 40/47 (85%) Strand = Plus / Plus Query: 86 gcgacctggtacggccagcccaatggcgccggccccgacgacaacgg 132 ||||||||||||||| ||||| ||||| || || ||||||||||| Sbjct: 168188 gcgacctggtacggcgctcccaacggcgctgggccggacgacaacgg 168234
>dbj|AK069853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036C07, full insert sequence Length = 1101 Score = 56.0 bits (28), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 89 acctggtacggccagcccaatggcgccggccccgacgacaacgg 132 |||||||||||| |||| || || |||||||||||||||||||| Sbjct: 174 acctggtacggcaagccaaagggtgccggccccgacgacaacgg 217
>gb|AF332180.1|AF332180 Zea mays beta-expansin 7 (expB7) mRNA, complete cds Length = 1173 Score = 54.0 bits (27), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| ||||||||||| ||||| ||||||||||| || ||| ||||||||||| Sbjct: 203 gccagggccacctggtacggtgcgcccaccggcgccggccctgatgacgacggtggtgcc 262 Query: 140 tgcggcttcaa 150 || || ||||| Sbjct: 263 tgtggattcaa 273
>gb|AF220610.1| Oryza sativa pollen allergen mRNA, complete cds Length = 1106 Score = 50.1 bits (25), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||||||||| | ||| ||||| || |||||| ||||| || Sbjct: 172 gccagggccacctggtacggccagccctacggctccggctccaccgacaatggtggcgcg 231 Query: 140 tgcgg 144 ||||| Sbjct: 232 tgcgg 236
>ref|NM_197637.1| Oryza sativa (japonica cultivar-group) beta-expansin (OSJNBa0082M15.4), mRNA Length = 1148 Score = 50.1 bits (25), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||||||||| | ||| ||||| || |||||| ||||| || Sbjct: 187 gccagggccacctggtacggccagccctacggctccggctccaccgacaatggtggcgcg 246 Query: 140 tgcgg 144 ||||| Sbjct: 247 tgcgg 251
>gb|AF261277.1| Oryza sativa beta-expansin (EXPB9) mRNA, complete cds Length = 1117 Score = 50.1 bits (25), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||||||||| | ||| ||||| || |||||| ||||| || Sbjct: 187 gccagggccacctggtacggccagccctacggctccggctccaccgacaatggtggcgcg 246 Query: 140 tgcgg 144 ||||| Sbjct: 247 tgcgg 251
>gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA, complete cds Length = 898 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Plus Query: 110 ggcgccggccccgacgacaacggtggtgcctgcggct 146 |||||||| ||||| |||||||||||||| ||||||| Sbjct: 199 ggcgccggtcccgatgacaacggtggtgcttgcggct 235
>dbj|AK099112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033P05, full insert sequence Length = 1071 Score = 50.1 bits (25), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||||||||| | ||| ||||| || |||||| ||||| || Sbjct: 203 gccagggccacctggtacggccagccctacggctccggctccaccgacaatggtggcgcg 262 Query: 140 tgcgg 144 ||||| Sbjct: 263 tgcgg 267
>dbj|AK070187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043G12, full insert sequence Length = 1121 Score = 50.1 bits (25), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||||||||| | ||| ||||| || |||||| ||||| || Sbjct: 203 gccagggccacctggtacggccagccctacggctccggctccaccgacaatggtggcgcg 262 Query: 140 tgcgg 144 ||||| Sbjct: 263 tgcgg 267
>emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansin B2 (expB2 gene) Length = 1194 Score = 48.1 bits (24), Expect = 0.007 Identities = 57/68 (83%) Strand = Plus / Plus Query: 83 agggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcctgc 142 ||||| |||||||||||| ||||| |||||||| ||||||||||| || || || ||| Sbjct: 224 agggccacctggtacggcgcgcccaccggcgccgggcccgacgacaatggcggcgcttgc 283 Query: 143 ggcttcaa 150 || ||||| Sbjct: 284 gggttcaa 291
>gb|AY166659.1| Oryza sativa (indica cultivar-group) pollen allergen (OSIPA) gene, partial cds Length = 2411 Score = 46.1 bits (23), Expect = 0.030 Identities = 26/27 (96%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagccc 106 |||||||| |||||||||||||||||| Sbjct: 2024 gccagggccacctggtacggccagccc 2050
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3 (OSJNBb0014I11.1), mRNA Length = 904 Score = 46.1 bits (23), Expect = 0.030 Identities = 59/71 (83%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||| |||| ||||||||||| |||||| | || ||||| Sbjct: 230 gccagggccacctggtacggcgctcccaccggcgccggccctgacgacgatggcggtgct 289 Query: 140 tgcggcttcaa 150 ||||| ||||| Sbjct: 290 tgcgggttcaa 300
>gb|AF261271.1| Oryza sativa beta-expansin (EXPB3) mRNA, complete cds Length = 1319 Score = 46.1 bits (23), Expect = 0.030 Identities = 59/71 (83%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||| |||| ||||||||||| |||||| | || ||||| Sbjct: 229 gccagggccacctggtacggcgctcccaccggcgccggccctgacgacgatggcggtgct 288 Query: 140 tgcggcttcaa 150 ||||| ||||| Sbjct: 289 tgcgggttcaa 299
>gb|AY197352.1| Zea mays clone pJR11 beta-expansin 9 protein (EXPB9) mRNA, complete cds Length = 1088 Score = 46.1 bits (23), Expect = 0.030 Identities = 35/39 (89%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggc 118 |||||||| ||||||||||| |||||||| || |||||| Sbjct: 141 gccagggccacctggtacggtcagcccaacggtgccggc 179
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 46.1 bits (23), Expect = 0.030 Identities = 26/27 (96%) Strand = Plus / Minus Query: 80 gccagggcgacctggtacggccagccc 106 |||||||| |||||||||||||||||| Sbjct: 118357 gccagggccacctggtacggccagccc 118331
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full insert sequence Length = 1313 Score = 46.1 bits (23), Expect = 0.030 Identities = 59/71 (83%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||||||| |||||||||||| |||| ||||||||||| |||||| | || ||||| Sbjct: 241 gccagggccacctggtacggcgctcccaccggcgccggccctgacgacgatggcggtgct 300 Query: 140 tgcggcttcaa 150 ||||| ||||| Sbjct: 301 tgcgggttcaa 311
>gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds Length = 1078 Score = 46.1 bits (23), Expect = 0.030 Identities = 59/71 (83%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggtggtgcc 139 |||| ||| ||||||||||| ||||| |||||||||||| |||||||| ||||| Sbjct: 154 gccaaggccacctggtacggtgcgcccaccggcgccggccccatggacaacggcggtgct 213 Query: 140 tgcggcttcaa 150 ||||||||||| Sbjct: 214 tgcggcttcaa 224
>gb|AY533104.1| Triticum aestivum beta-expansin 2 (EXPB2) gene, complete cds Length = 1216 Score = 44.1 bits (22), Expect = 0.12 Identities = 46/54 (85%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacggt 133 |||| ||| |||||||||||| |||||| ||| |||||||| | ||||||||| Sbjct: 150 gccaaggccacctggtacggcaagcccaccggctccggccccaaagacaacggt 203
>gb|AE005981.1| Caulobacter crescentus CB15 section 307 of 359 of the complete genome Length = 11219 Score = 44.1 bits (22), Expect = 0.12 Identities = 31/34 (91%) Strand = Plus / Plus Query: 98 ggccagcccaatggcgccggccccgacgacaacg 131 ||||||||| | ||||||||| |||||||||||| Sbjct: 3569 ggccagccccacggcgccggcgccgacgacaacg 3602
>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6 (OSJNBb0014I11.3), mRNA Length = 1240 Score = 42.1 bits (21), Expect = 0.46 Identities = 36/41 (87%) Strand = Plus / Plus Query: 110 ggcgccggccccgacgacaacggtggtgcctgcggcttcaa 150 ||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 265 ggcgccggccctgacgacaacggcggcgcttgcgggttcaa 305
>gb|AF261274.1| Oryza sativa beta-expansin (EXPB6) mRNA, complete cds Length = 1250 Score = 42.1 bits (21), Expect = 0.46 Identities = 36/41 (87%) Strand = Plus / Plus Query: 110 ggcgccggccccgacgacaacggtggtgcctgcggcttcaa 150 ||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 258 ggcgccggccctgacgacaacggcggcgcttgcgggttcaa 298
>gb|AY533102.1| Triticum aestivum beta-expansin 2 (EXPB2) mRNA, complete cds Length = 1068 Score = 42.1 bits (21), Expect = 0.46 Identities = 45/53 (84%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacgg 132 |||| ||| |||||||||||| |||||| ||| |||||||| | |||||||| Sbjct: 150 gccaaggccacctggtacggcaagcccaccggctccggccccaaagacaacgg 202
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 0.46 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 cctcaacgtcaccgacgccaccaag 58 ||||||||||||||||||| ||||| Sbjct: 5204248 cctcaacgtcaccgacgccgccaag 5204272
>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full insert sequence Length = 1257 Score = 42.1 bits (21), Expect = 0.46 Identities = 36/41 (87%) Strand = Plus / Plus Query: 110 ggcgccggccccgacgacaacggtggtgcctgcggcttcaa 150 ||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 278 ggcgccggccctgacgacaacggcggcgcttgcgggttcaa 318
>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full insert sequence Length = 1257 Score = 42.1 bits (21), Expect = 0.46 Identities = 36/41 (87%) Strand = Plus / Plus Query: 110 ggcgccggccccgacgacaacggtggtgcctgcggcttcaa 150 ||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 278 ggcgccggccctgacgacaacggcggcgcttgcgggttcaa 318
>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full insert sequence Length = 1263 Score = 42.1 bits (21), Expect = 0.46 Identities = 36/41 (87%) Strand = Plus / Plus Query: 110 ggcgccggccccgacgacaacggtggtgcctgcggcttcaa 150 ||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 284 ggcgccggccctgacgacaacggcggcgcttgcgggttcaa 324
>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full insert sequence Length = 1259 Score = 42.1 bits (21), Expect = 0.46 Identities = 36/41 (87%) Strand = Plus / Plus Query: 110 ggcgccggccccgacgacaacggtggtgcctgcggcttcaa 150 ||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 278 ggcgccggccctgacgacaacggcggcgcttgcgggttcaa 318
>gb|AY543540.1| Triticum aestivum expansin EXPB5 mRNA, complete cds Length = 960 Score = 42.1 bits (21), Expect = 0.46 Identities = 45/53 (84%) Strand = Plus / Plus Query: 80 gccagggcgacctggtacggccagcccaatggcgccggccccgacgacaacgg 132 |||| ||| |||||||||||| |||||| ||| |||||||| | |||||||| Sbjct: 133 gccaaggccacctggtacggcaagcccaccggctccggccccaaagacaacgg 185
>ref|NM_001031035.1| Gallus gallus PTK7 protein tyrosine kinase 7 (PTK7), mRNA Length = 3788 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ggcgccggccccgacgacaacggt 133 |||||||||||||| ||||||||| Sbjct: 595 ggcgccggccccgatgacaacggt 618
>gb|AY197353.1| Zea mays clone pJR9 beta-expansin 1 protein (EXPB1) mRNA, complete cds Length = 1066 Score = 40.1 bits (20), Expect = 1.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 83 agggcgacctggtacggccagcccaatggcgccggc 118 ||||| ||||||||||| |||||||| || |||||| Sbjct: 170 agggccacctggtacggtcagcccaacggtgccggc 205
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tcgacgtcgacctcaacgtc 43 |||||||||||||||||||| Sbjct: 98564 tcgacgtcgacctcaacgtc 98583
>emb|AJ131850.1|PPR131850 Poa pratensis mRNA for group I pollen allergen Length = 792 Score = 40.1 bits (20), Expect = 1.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 89 acctggtacggccagcccaatggcgccggccccgacgacaacgg 132 |||||||||||| |||| | |||||||||||| | |||||||| Sbjct: 139 acctggtacggcaagccgaccggcgccggccccaaggacaacgg 182
>gb|DQ421828.1| Zea mays clone 1.8 Zea m 1 allergen mRNA, partial cds Length = 1019 Score = 40.1 bits (20), Expect = 1.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 113 gccggccccgacgacaacggtggtgcctgcgg 144 ||||| ||||||||||||||||| | |||||| Sbjct: 137 gccggtcccgacgacaacggtggcggctgcgg 168
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tcgacgtcgacctcaacgtc 43 |||||||||||||||||||| Sbjct: 2532590 tcgacgtcgacctcaacgtc 2532609
>gb|AF332174.1|AF332174 Zea mays beta-expansin 1 (expB1) mRNA, complete cds Length = 1080 Score = 40.1 bits (20), Expect = 1.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 83 agggcgacctggtacggccagcccaatggcgccggc 118 ||||| ||||||||||| |||||||| || |||||| Sbjct: 170 agggccacctggtacggtcagcccaacggtgccggc 205
>gb|AY103636.1| Zea mays PCO124530 mRNA sequence Length = 1085 Score = 40.1 bits (20), Expect = 1.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 83 agggcgacctggtacggccagcccaatggcgccggc 118 ||||| ||||||||||| |||||||| || |||||| Sbjct: 182 agggccacctggtacggtcagcccaacggtgccggc 217
>gb|M63437.1|CHKKLGG Chicken KLG gene, complete cds Length = 3788 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ggcgccggccccgacgacaacggt 133 |||||||||||||| ||||||||| Sbjct: 595 ggcgccggccccgatgacaacggt 618
>ref|XM_482150.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 10 cgacgcctcccccttcgacgtcg 32 ||||||||||| ||||||||||| Sbjct: 658 cgacgcctccctcttcgacgtcg 680
>ref|XM_471005.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 cgacgtcgacctcaacgtcaccg 47 |||||||| |||||||||||||| Sbjct: 489 cgacgtcggcctcaacgtcaccg 511
>gb|AY676931.1| Oryza sativa (indica cultivar-group) transcription factor WRKY32 (WRKY32) mRNA, complete cds Length = 960 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 10 cgacgcctcccccttcgacgtcg 32 ||||||||||| ||||||||||| Sbjct: 522 cgacgcctccctcttcgacgtcg 544
>gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete cds Length = 1210 Score = 38.2 bits (19), Expect = 7.2 Identities = 40/47 (85%) Strand = Plus / Plus Query: 86 gcgacctggtacggccagcccaatggcgccggccccgacgacaacgg 132 ||||||||||||||| ||||| ||||| || || ||||||||||| Sbjct: 339 gcgacctggtacggcgctcccaacggcgctgggccggacgacaacgg 385
>ref|XM_756492.1| Ustilago maydis 521 hypothetical protein (UM05438.1) partial mRNA Length = 3225 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 caacgtcaccgacgccacc 55 ||||||||||||||||||| Sbjct: 1188 caacgtcaccgacgccacc 1206
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 cccggccagggcgacctgg 94 ||||||||||||||||||| Sbjct: 938013 cccggccagggcgacctgg 938031
>ref|XM_505739.1| Yarrowia lipolytica CLIB122, YALI0F22165g predicted mRNA Length = 2841 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 tcaacgtcaccgacgccac 54 ||||||||||||||||||| Sbjct: 389 tcaacgtcaccgacgccac 407
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 109 tggcgccggccccgacgac 127 ||||||||||||||||||| Sbjct: 1525553 tggcgccggccccgacgac 1525571
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 cgccaccgacgcctccccc 22 ||||||||||||||||||| Sbjct: 22940 cgccaccgacgcctccccc 22922
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 cgacgtcgacctcaacgtcaccg 47 |||||||| |||||||||||||| Sbjct: 115435 cgacgtcggcctcaacgtcaccg 115413
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 38.2 bits (19), Expect = 7.2 Identities = 40/47 (85%) Strand = Plus / Plus Query: 86 gcgacctggtacggccagcccaatggcgccggccccgacgacaacgg 132 ||||||||||||||| ||||| ||||| || || ||||||||||| Sbjct: 5255 gcgacctggtacggcgctcccaacggcgctgggccggacgacaacgg 5301
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 38.2 bits (19), Expect = 7.2 Identities = 40/47 (85%) Strand = Plus / Plus Query: 86 gcgacctggtacggccagcccaatggcgccggccccgacgacaacgg 132 ||||||||||||||| ||||| ||||| || || ||||||||||| Sbjct: 102188 gcgacctggtacggcgctcccaacggcgctgggccggacgacaacgg 102234
>tpg|BK005072.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 69 (WRKY69) gene, complete cds Length = 1054 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 10 cgacgcctcccccttcgacgtcg 32 ||||||||||| ||||||||||| Sbjct: 616 cgacgcctccctcttcgacgtcg 638
>gb|AE012470.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 378 of 460 of the complete genome Length = 12938 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 cccggccagggcgacctgg 94 ||||||||||||||||||| Sbjct: 5542 cccggccagggcgacctgg 5560
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 cccggccagggcgacctgg 94 ||||||||||||||||||| Sbjct: 787471 cccggccagggcgacctgg 787453
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 cgacgtcgacctcaacgtcaccg 47 |||||||| |||||||||||||| Sbjct: 584468 cgacgtcggcctcaacgtcaccg 584446
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 10 cgacgcctcccccttcgacgtcg 32 ||||||||||| ||||||||||| Sbjct: 18213553 cgacgcctccctcttcgacgtcg 18213575
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 38.2 bits (19), Expect = 7.2 Identities = 40/47 (85%) Strand = Plus / Minus Query: 86 gcgacctggtacggccagcccaatggcgccggccccgacgacaacgg 132 ||||||||||||||| ||||| ||||| || || ||||||||||| Sbjct: 94478 gcgacctggtacggcgctcccaacggcgctgggccggacgacaacgg 94432
>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0434E03 Length = 142414 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 10 cgacgcctcccccttcgacgtcg 32 ||||||||||| ||||||||||| Sbjct: 35865 cgacgcctccctcttcgacgtcg 35887
>dbj|AK111606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102P22, full insert sequence Length = 1378 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 10 cgacgcctcccccttcgacgtcg 32 ||||||||||| ||||||||||| Sbjct: 658 cgacgcctccctcttcgacgtcg 680
>dbj|AK062396.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-D08, full insert sequence Length = 1092 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 cgacgtcgacctcaacgtcaccg 47 |||||||| |||||||||||||| Sbjct: 528 cgacgtcggcctcaacgtcaccg 550
>dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G02, full insert sequence Length = 1027 Score = 38.2 bits (19), Expect = 7.2 Identities = 40/47 (85%) Strand = Plus / Plus Query: 86 gcgacctggtacggccagcccaatggcgccggccccgacgacaacgg 132 ||||||||||||||| ||||| ||||| || || ||||||||||| Sbjct: 147 gcgacctggtacggcgctcccaacggcgctgggccggacgacaacgg 193
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 cgacgtcgacctcaacgtcaccg 47 |||||||| |||||||||||||| Sbjct: 59663 cgacgtcggcctcaacgtcaccg 59641
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 acgtcaccgacgccaccaa 57 ||||||||||||||||||| Sbjct: 1834826 acgtcaccgacgccaccaa 1834808
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 36 tcaacgtcaccgacgccac 54 ||||||||||||||||||| Sbjct: 2936811 tcaacgtcaccgacgccac 2936793 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 766,554 Number of Sequences: 3902068 Number of extensions: 766554 Number of successful extensions: 59479 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58576 Number of HSP's gapped (non-prelim): 903 length of query: 150 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 129 effective length of database: 17,151,101,840 effective search space: 2212492137360 effective search space used: 2212492137360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
