Clone Information

BLAST Search Result

Clone Name	baet57d09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)	32	0.63
2	HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)	32	0.63
3	J1L_HCMVA (P17143) Hypothetical protein J1L	31	1.1
4	EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)	31	1.1
5	MRTFB_XENLA (Q8AYC1) Myocardin-related transcription factor B (M...	31	1.1
6	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	31	1.1
7	SOX9_MOUSE (Q04887) Transcription factor SOX-9	30	1.8
8	TSC1_RAT (Q9Z136) Hamartin (Tuberous sclerosis 1 protein homolog)	30	1.8
9	SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)	30	1.8
10	SID4_SCHPO (O60187) Septation initiation protein sid4	30	1.8
11	CARD6_HUMAN (Q9BX69) Caspase recruitment domain-containing prote...	30	1.8
12	MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia p...	30	2.4
13	PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein	30	2.4
14	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	30	2.4
15	PRP33_DAUCA (P06600) Proline-rich 33 kDa extensin-related protei...	30	2.4
16	CABIN_RAT (O88480) Calcineurin-binding protein Cabin 1 (Calcineu...	29	3.1
17	CABIN_HUMAN (Q9Y6J0) Calcineurin-binding protein Cabin 1 (Calcin...	29	3.1
18	ATG26_CRYNE (Q5KK25) Sterol 3-beta-glucosyltransferase (EC 2.4.1...	29	3.1
19	LGT_DESVH (Q72G45) Prolipoprotein diacylglyceryl transferase (EC...	29	3.1
20	HXA3_MOUSE (P02831) Homeobox protein Hox-A3 (Hox-1.5) (MO-10)	29	3.1
21	SMAD5_MOUSE (P97454) Mothers against decapentaplegic homolog 5 (...	29	3.1
22	PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)	29	3.1
23	GBX1_MOUSE (P82976) Homeobox protein GBX-1 (Gastrulation and bra...	29	3.1
24	SNX41_YEAST (Q04053) Sorting nexin-41	29	4.1
25	MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-pro...	29	4.1
26	MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)	29	4.1
27	VAL2_TYLCA (P36280) AL2 protein (C2 protein)	29	4.1
28	NETR_GORGO (Q5G270) Neurotrypsin precursor (EC 3.4.21.-)	29	4.1
29	PROP1_ALOBE (Q3LU38) Homeobox protein prophet of Pit-1 (PROP-1) ...	28	5.3
30	MADCA_HUMAN (Q13477) Mucosal addressin cell adhesion molecule 1 ...	28	5.3
31	CCHL_NEUCR (P14187) Cytochrome c heme lyase (EC 4.4.1.17) (CCHL)...	28	5.3
32	SLAP2_CLOTM (Q06853) Cell surface glycoprotein 2 precursor (S-la...	28	5.3
33	LBD11_ARATH (Q9SK08) LOB domain protein 11	28	5.3
34	PS1C2_MOUSE (Q80ZC9) Psoriasis susceptibility 1 candidate gene 2...	28	7.0
35	CCD50_RAT (Q810U0) Coiled-coil domain-containing protein 50 (Pro...	28	7.0
36	YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear pro...	28	7.0
37	VGLC_HHV1K (P28986) Glycoprotein C precursor	28	7.0
38	VGLC_HHV11 (P10228) Glycoprotein C precursor	28	7.0
39	HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-l...	28	7.0
40	ETV6_MOUSE (P97360) Transcription factor ETV6 (ETS-related prote...	28	7.0
41	TENS_CHICK (Q04205) Tensin	28	7.0
42	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	28	7.0
43	RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ra...	28	7.0
44	EXTN2_ARATH (Q9M1G9) Extensin-2 precursor (AtExt2) (Cell wall hy...	28	7.0
45	DPOD3_MOUSE (Q9EQ28) DNA polymerase delta subunit 3 (DNA polymer...	28	7.0
46	Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)	28	9.1
47	TRI66_MOUSE (Q924W6) Tripartite motif protein 66	28	9.1
48	ATG26_NEUCR (Q7S1I0) Sterol 3-beta-glucosyltransferase (EC 2.4.1...	28	9.1
49	GLE1_DROME (Q9V4W1) Nucleoporin GLE1	28	9.1
50	EXTN1_ARATH (Q38913) Extensin-1 precursor (AtExt1) (AtExt4)	28	9.1
51	HNRL1_HUMAN (Q9BUJ2) Heterogeneous nuclear ribonucleoprotein U-l...	28	9.1
52	EXTN_DAUCA (P06599) Extensin precursor	28	9.1
53	BARH2_MOUSE (Q8VIB5) BarH-like 2 homeobox protein (Bar-class hom...	28	9.1
54	DEDD_ECOLI (P09549) Protein dedD	28	9.1
55	Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 in...	28	9.1
56	SIPA1_MOUSE (P46062) Signal-induced proliferation-associated pro...	28	9.1
57	HXA3_HUMAN (O43365) Homeobox protein Hox-A3 (Hox-1E)	28	9.1
58	NFAC2_MOUSE (Q60591) Nuclear factor of activated T-cells, cytopl...	28	9.1

>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)|
          Length = 283

 Score = 31.6 bits (70), Expect = 0.63
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +1

Query: 22  PTPSFYLPT--RSPPPATAFPKDPDHTEPPK 108
           PTP  Y P+   +PPPAT  P  P +T  PK
Sbjct: 69  PTPPTYTPSPKPTPPPATPKPTPPTYTPSPK 99



 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSS 135
           PTP  Y P+  PP     P  P +T  PK   +  P+S
Sbjct: 193 PTPPVYTPSPKPPK----PSPPTYTPTPKPPATKPPTS 226



 Score = 29.3 bits (64), Expect = 3.1
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +1

Query: 22  PTPSFYLPTRSPP---PATAFPKDPDHTEPPKQSRSSTPS 132
           PTP  Y P+  PP   P T  P  P +T  PK   +  P+
Sbjct: 142 PTPPVYTPSPKPPVTKPPTPKPTPPVYTPNPKPPVTKPPT 181

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>HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)|
          Length = 176

 Score = 31.6 bits (70), Expect = 0.63
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +2

Query: 5   GTSLSSPLPVFISPPDPRHQLPHSPKIQITPSH---RSNPDRAPRAP 136
           GT +S P P    P DP    P SPK + TP     R  P + PR+P
Sbjct: 100 GTVVSPPRPRGRPPKDPNAP-PKSPKAKATPGSGRPRGRPKKVPRSP 145

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>J1L_HCMVA (P17143) Hypothetical protein J1L|
          Length = 309

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 29  PVFISPPDPRHQLPHSPKIQITPSHRSNPDRAPRAPEKK 145
           P    PP P      +P +  TP HR  P+R+ + P+K+
Sbjct: 28  PAPAQPPSPAPTPSRTPPVSATPRHRRRPERS-KTPDKR 65

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>EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)|
          Length = 267

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTP 129
           PTP  Y P  SP P T  P  P +T  PK     TP
Sbjct: 143 PTPPTYTP--SPKPPTPKPTPPTYTPSPKPPTHPTP 176



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSSR 138
           PTP  Y P  SP P T  P  P +T  PK   +  P+ +
Sbjct: 194 PTPPTYTP--SPKPPTPKPTPPTYTPSPKPPATKPPTPK 230



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 16  FIPTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSSR 138
           + P+P    P  +PP  T  PK P H  P     + TPS +
Sbjct: 148 YTPSPKPPTPKPTPPTYTPSPKPPTHPTPKPTPPTYTPSPK 188



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSSR 138
           PTP  Y P  SP P T  P  P +T  PK   +  P+ +
Sbjct: 90  PTPPTYTP--SPKPPTPKPTPPTYTPSPKPPATKPPTPK 126



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSSR 138
           PTP  Y P  SP P T  P  P +T  PK   +  P+ +
Sbjct: 53  PTPPTYTP--SPKPPTPKPTPPTYTPSPKPPATKPPTPK 89



 Score = 28.9 bits (63), Expect = 4.1
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 25  TPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSSR 138
           TP  Y P  SP P T  P  P +T  PK   S  P+ +
Sbjct: 17  TPPTYTP--SPKPPTPKPTPPTYTPSPKPPASKPPTPK 52



 Score = 28.1 bits (61), Expect = 7.0
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPK 108
           PTP  Y P  SP P T  P  P +T  PK
Sbjct: 178 PTPPTYTP--SPKPPTPKPTPPTYTPSPK 204



 Score = 28.1 bits (61), Expect = 7.0
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPK 108
           PTP  Y P  SP P T  P  P +T  PK
Sbjct: 127 PTPPTYTP--SPKPPTPKPTPPTYTPSPK 153

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>MRTFB_XENLA (Q8AYC1) Myocardin-related transcription factor B (MRTF-B)|
           (xMRTF-B)
          Length = 1067

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
 Frame = +1

Query: 16  FIPTPSFYLPTRSP--------PPATAFPKDPDHTEPPKQSRSSTPSSR 138
           F P P+  L TRSP         PA      P HTE P+  +S  P  R
Sbjct: 236 FKPVPTADLTTRSPLSCIVSKPGPALIKQTQPKHTEKPRSKKSKDPKPR 284

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 13  AFIPTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTP 129
           A+ P P    PT SPPP T  P  P + +PP    + +P
Sbjct: 439 AYSPPPP---PTYSPPPPTYSPPPPAYAQPPPPPPTYSP 474



 Score = 30.0 bits (66), Expect = 1.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 19  IPTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTP 129
           +P P    PT SPPP T  P  P + +PP    + +P
Sbjct: 403 LPAP----PTYSPPPPTYSPPPPTYAQPPPLPPTYSP 435



 Score = 29.3 bits (64), Expect = 3.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           P P+   PT SPP     P+ P H   P   R + P+
Sbjct: 207 PPPTHVQPTPSPPSRGHQPQPPTHRHAPPTHRHAPPT 243



 Score = 28.5 bits (62), Expect = 5.3
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +1

Query: 16  FIPTPSFYLP----TRSPPPATAFPKDPDHTEPPKQSRSSTPSSREE 144
           + P P  Y P    + SPPP T  P  P  + PP  S S  P + E+
Sbjct: 346 YSPPPPVYSPPPPPSYSPPPPTYLPPPPP-SSPPPPSFSPPPPTYEQ 391

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>SOX9_MOUSE (Q04887) Transcription factor SOX-9|
          Length = 507

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 41  SPPDPRHQLPHSPKIQITPSHRSNPDRAPRAPEKK 145
           +PP P  Q P +P+    P  +  P + P+AP+++
Sbjct: 341 APPPPPQQPPQAPQAPQAPPQQQAPPQQPQAPQQQ 375

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>TSC1_RAT (Q9Z136) Hamartin (Tuberous sclerosis 1 protein homolog)|
          Length = 1163

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 43  PTRSPPPATAFPKDPDHTEPPKQSRSSTPSSREE 144
           P  SPPPA   P+D D    P    S+TP  +EE
Sbjct: 391 PATSPPPAPPCPQD-DCAHGPASQASATPPRKEE 423

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>SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)|
          Length = 1500

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 25   TPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTP 129
            TP    P +  P  T  PKDPD  E PK+ +  +P
Sbjct: 1413 TPIPRTPDKPTPIPTPKPKDPDKPETPKEPKVPSP 1447

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>SID4_SCHPO (O60187) Septation initiation protein sid4|
          Length = 660

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 2   TGTSLSSPLPVFISPPDPRHQLPHSPKIQITPSHRSNPDRAPR 130
           T T   +  P  I  P  RH   +SP    + SH S+ D++P+
Sbjct: 134 TSTPYKNVAPKVIDSPSARHMHSNSPSFPPSQSHTSSYDQSPK 176

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>CARD6_HUMAN (Q9BX69) Caspase recruitment domain-containing protein 6|
          Length = 1037

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 17   SSPLPVFISPPDPRHQLPHSPKIQITPSHRSNPDRAPRAPEK 142
            S+P  V  S P P H +P  PK   T S +S P +   +P K
Sbjct: 947  SNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCK 988

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>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
           (Trithorax homolog 2)
          Length = 2715

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSSREE 144
           P P    P+ SPPP    P  P  + PP  S    P+  E+
Sbjct: 413 PPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPPPAQEEQ 453

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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 19  IPTPSFYLPTRSPPPATAFPKDPDHTEPP 105
           +  PS   P   PP     PKDP H +PP
Sbjct: 26  VKPPSTQPPHVKPPSTPKHPKDPPHVKPP 54

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +1

Query: 55   PPPATAFPKDPDHTEPPKQSRSS--TPSSR 138
            PPP T  P +P ++ PP  S S   TPS R
Sbjct: 929  PPPPTTSPPEPPYSTPPAPSSSGRLTPSPR 958

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>PRP33_DAUCA (P06600) Proline-rich 33 kDa extensin-related protein precursor|
           (Fragment)
          Length = 211

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 8/46 (17%)
 Frame = +2

Query: 23  PLPVFISP----PDPRHQLPHSPKIQI--TPSHRSNP--DRAPRAP 136
           P PV+  P    P P H+ PH P I +   P+H+ NP     PR P
Sbjct: 159 PSPVYQPPKTEKPVPEHKPPHLPPIVVRPPPTHKPNPPYGHHPRHP 204

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>CABIN_RAT (O88480) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)|
            (CAIN)
          Length = 2182

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = +1

Query: 19   IPTPSFYLPTRS-----PPPATAFPKDPDHTEPPKQSRSSTPSSREE 144
            +P P   LP+ S      PP TA P D D+ +  K  + +TP  R +
Sbjct: 1330 LPGPGASLPSSSGPGLTSPPYTATPIDHDYVKCKKPRQQATPDDRSQ 1376

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>CABIN_HUMAN (Q9Y6J0) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)|
            (CAIN)
          Length = 2220

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = +1

Query: 19   IPTPSFYLPTRS-----PPPATAFPKDPDHTEPPKQSRSSTPSSREE 144
            +P P   LP+ S      PP TA P D D+ +  K  + +TP  R +
Sbjct: 1330 LPGPGASLPSSSGPGLTSPPYTATPIDHDYVKCKKPHQQATPDDRSQ 1376

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>ATG26_CRYNE (Q5KK25) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
           (Autophagy-related protein 26)
          Length = 1585

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           PTP    P + P P TA  + PD  +PP Q + +  S
Sbjct: 7   PTPP---PLQPPFPPTAIARGPDRPDPPPQHQQAAES 40

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>LGT_DESVH (Q72G45) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 263

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 105 RWLGVIWIFGECGSWWRGSGGEIKTGS 25
           RW G++++FG    WW G     + GS
Sbjct: 20  RWYGLMYLFGFLSGWWLGRRRAAQPGS 46

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>HXA3_MOUSE (P02831) Homeobox protein Hox-A3 (Hox-1.5) (MO-10)|
          Length = 443

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 28  PSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSS 135
           P    P   PPP  A P  P   +PP Q  + TP++
Sbjct: 84  PGLGEPPLPPPPPQAAPPAPQPPQPPPQPPAPTPAA 119

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>SMAD5_MOUSE (P97454) Mothers against decapentaplegic homolog 5 (SMAD 5)|
           (Mothers against DPP homolog 5) (Smad5) (mSmad5)
           (Dwarfin-C) (Dwf-C)
          Length = 465

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKD---PDHTEPPKQSRSSTPSS 135
           P   F LP  +PPPA   P D   PD+++P   S +  P +
Sbjct: 211 PGSPFQLPADTPPPAYMPPDDQMAPDNSQPMDTSSNMIPQT 251

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>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)|
          Length = 5183

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 43  PTRSPPPATAFPKDPDHTEPPKQSRSSTPSSREE 144
           P + P PA   P+ P  T+PP Q   S   S ++
Sbjct: 456 PPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQ 489

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>GBX1_MOUSE (P82976) Homeobox protein GBX-1 (Gastrulation and brain-specific|
           homeobox protein 1)
          Length = 418

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 11  SLSSPLPVFISPPDPRHQLPHSPKIQITPSHRSNPDRAPR 130
           +L++ LP F  PPD  +  P       + + RSNP+ A R
Sbjct: 159 ALTTALPSFAEPPDAYYGPPELAAAAASTASRSNPEPAAR 198

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>SNX41_YEAST (Q04053) Sorting nexin-41|
          Length = 625

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 52  SPPPATAFPKDPDHTEPPKQSRSSTPSS 135
           SPP +++ P  P H+     SR+ST SS
Sbjct: 54  SPPSSSSLPSSPAHSSSAGSSRASTSSS 81

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>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 1734

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 22   PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSS 135
            PT S  L  RSPP       D  H+     S+SS+PSS
Sbjct: 1203 PTHSHSLSPRSPPQGYRVAPDAVHSVGGNSSQSSSPSS 1240

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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 19   IPTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTP 129
            I TPS    T SPPP T     P  T  P  + ++TP
Sbjct: 1396 ITTPSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTP 1432

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>VAL2_TYLCA (P36280) AL2 protein (C2 protein)|
          Length = 135

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 41  SPPDPRHQLPHSPKIQITPSHRSNPDRAPRAPEK 142
           SP    H+ P +P +Q+ P H S+PD     PE+
Sbjct: 75  SPLFQDHKAPQAP-VQLQPRHHSSPDTVQSQPEE 107

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>NETR_GORGO (Q5G270) Neurotrypsin precursor (EC 3.4.21.-)|
          Length = 876

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 28  PSFYLPTRSPPPATAFPKD-PDHTEPPKQSRSSTP 129
           PS+YLPT+  PP T  P   P    PP+   +  P
Sbjct: 44  PSYYLPTQQRPPRTRPPPPLPRFPRPPRALPAQRP 78

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>PROP1_ALOBE (Q3LU38) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 226

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +1

Query: 37  YLPTRSPPPATAFPKDPDHTEPPKQSRSST 126
           Y  T  PPP T FP    H  P + S  ST
Sbjct: 155 YSYTTPPPPVTCFPHPYSHAFPSQPSTGST 184

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>MADCA_HUMAN (Q13477) Mucosal addressin cell adhesion molecule 1 precursor|
           (MAdCAM-1) (hMAdCAM-1)
          Length = 406

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = +1

Query: 46  TRSPPPATAFPKDPDHTEP---PKQSRSSTPSS 135
           T   PP T  P+ PD T P   P+Q  + TP S
Sbjct: 276 TSQEPPDTTSPEPPDKTSPEPAPQQGSTHTPRS 308

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>CCHL_NEUCR (P14187) Cytochrome c heme lyase (EC 4.4.1.17) (CCHL)|
           (Holocytochrome-C synthase)
          Length = 346

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 126 GARSGLLRWLGVIWIFGECGSWWRGSGGEIK 34
           GA   LLRW G +W        W+ SGGE++
Sbjct: 318 GACERLLRWGGDVW--------WKASGGEVR 340

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>SLAP2_CLOTM (Q06853) Cell surface glycoprotein 2 precursor (S-layer protein 2)|
          Length = 688

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 19  IPTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           +PT +   PT++PP  TA  + P  T P   + S TP+
Sbjct: 374 VPTQT---PTQTPPTTTAPSQTPTQTPPTTTAPSQTPT 408

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>LBD11_ARATH (Q9SK08) LOB domain protein 11|
          Length = 229

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 2   TGTSLSSPLPVFISPPDPRHQLPHSPKIQITP 97
           T T ++SP P    PP P  Q P  P + ++P
Sbjct: 21  TTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSP 52

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>PS1C2_MOUSE (Q80ZC9) Psoriasis susceptibility 1 candidate gene 2 protein|
           homolog precursor (SPR1 protein)
          Length = 134

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTP 129
           P P    P R  P + A+P  P  T+PPK      P
Sbjct: 63  PPPGSNRPWRDLPDSGAWPPKPPSTDPPKPPLPDDP 98

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>CCD50_RAT (Q810U0) Coiled-coil domain-containing protein 50 (Protein Ymer)|
          Length = 305

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 43  PTRSPPPATAFPKDPDHTEPPKQSRSSTPSSREE 144
           P+R PPPA   P+D D T    Q  ++   S+ E
Sbjct: 262 PSRPPPPAAMAPEDVDPTHFTNQHSNTRHFSKSE 295

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>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
           (ZAP113)
          Length = 1951

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           P PS+Y PT S P        P  + P +   + TPS
Sbjct: 170 PPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPS 206

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>VGLC_HHV1K (P28986) Glycoprotein C precursor|
          Length = 511

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  TPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTP 129
           TP      +SPP +T  PK  ++T P K  R + P
Sbjct: 87  TPKPTSTPKSPPTSTPDPKPKNNTTPAKSGRPTKP 121

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>VGLC_HHV11 (P10228) Glycoprotein C precursor|
          Length = 511

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  TPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTP 129
           TP      +SPP +T  PK  ++T P K  R + P
Sbjct: 87  TPKPTSTPKSPPTSTPDPKPKNNTTPAKSGRPTKP 121

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>HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-like protein 1|
          Length = 859

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           P P  Y P R+PP A+++ K+ +   P   + +STP+
Sbjct: 715 PPPPSYSPARNPPGASSYNKNSN--IPGSSANTSTPT 749

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>ETV6_MOUSE (P97360) Transcription factor ETV6 (ETS-related protein Tel1) (Tel)|
           (ETS translocation variant 6)
          Length = 485

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 53  PRHQLPHSPKIQITPSHRSNPDRAPRAPEK 142
           P  +L H P+  IT +HR +PD   + P++
Sbjct: 175 PTIELLHRPRSPITTNHRPSPDPEQQRPQR 204

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>TENS_CHICK (Q04205) Tensin|
          Length = 1744

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 21   PHSQFLSPHQIPATSYRIPQRSRSHRATEAIQIEHP 128
            PH     PH +  T+YR P  S++  A  + Q   P
Sbjct: 1183 PHGTVTPPHAVAETAYRSPMVSQTPSAHSSYQTSSP 1218

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSSR 138
           P+P      RSP PA   P  P    PP++ RS TP  R
Sbjct: 562 PSPPPARRRRSPSPA---PPPPPPPPPPRRRRSPTPPPR 597

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>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding|
           protein M) (RanBPM) (BPM90) (BPM-L)
          Length = 729

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 43  PTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           P   PPPATA P  P    PP  S ++  S
Sbjct: 71  PPPPPPPATAAPPPPPPPPPPPASAAAPAS 100

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>EXTN2_ARATH (Q9M1G9) Extensin-2 precursor (AtExt2) (Cell wall|
           hydroxyproline-rich glycoprotein 1) (HRGP1)
          Length = 743

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
 Frame = +1

Query: 22  PTPSFYLPT-----RSPPPATAFPKDP--DHTEPPKQSRSSTPSS 135
           P P +Y P+     +SPPP + +   P  ++  PP  S S +P +
Sbjct: 697 PPPPYYSPSPKVYYKSPPPPSYYSPSPKVEYKSPPPPSYSPSPKT 741

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>DPOD3_MOUSE (Q9EQ28) DNA polymerase delta subunit 3 (DNA polymerase delta|
           subunit p66)
          Length = 462

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +1

Query: 16  FIPTPSFYLPTRSPPPATAFPKDP-DHTEPPKQSRSSTPSSR 138
           F  +P  Y      PP  + P DP   TEPP   RSS  + R
Sbjct: 336 FEDSPEMYEADSPSPPPVSPPPDPMPKTEPPPVKRSSGETKR 377

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>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)|
          Length = 279

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           PTPS   PT SP P  +    P  T  P  S + TPS
Sbjct: 139 PTPS---PTPSPTPTPSPTPSPTPTPSPTPSPTPTPS 172



 Score = 27.7 bits (60), Expect = 9.1
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           PTPS   PT SP P  +    P  T  P  S + TPS
Sbjct: 119 PTPS---PTPSPTPTPSPTPTPSPTPSPTPSPTPTPS 152



 Score = 27.7 bits (60), Expect = 9.1
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           PTPS   PT SP P  +    P  T  P  + S TPS
Sbjct: 109 PTPS---PTPSPTPTPSPTPSPTPTPSPTPTPSPTPS 142



 Score = 27.7 bits (60), Expect = 9.1
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           PTPS   PT SP P  +    P  T  P  S + TPS
Sbjct: 99  PTPS---PTPSPTPTPSPTPSPTPTPSPTPSPTPTPS 132

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>TRI66_MOUSE (Q924W6) Tripartite motif protein 66|
          Length = 1209

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +1

Query: 43  PTRSPPPATAFPKDPDHTEPPKQSRSSTPSSREE 144
           P + PPP    P  P H  PP        SS+ E
Sbjct: 453 PQQQPPPPPPPPPPPQHAPPPLPPSQHLASSQHE 486

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>ATG26_NEUCR (Q7S1I0) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
           (Autophagy-related protein 26)
          Length = 1553

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 29  PVFISPPDPRHQLPHSPKIQITPSHRSNPDRAPRAP 136
           P+  SPP P  Q   + +   +  HR+NP  AP  P
Sbjct: 11  PILDSPPSPNPQSQLNTETS-SSQHRANPSEAPAQP 45

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>GLE1_DROME (Q9V4W1) Nucleoporin GLE1|
          Length = 677

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 23  PLPVFISPPDPRHQLPHSPKIQITPSHRSNPD 118
           PLP     P+P +++P  PKI   P+    PD
Sbjct: 51  PLPEESPAPEPNNEIPLLPKIDFEPNISCFPD 82

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>EXTN1_ARATH (Q38913) Extensin-1 precursor (AtExt1) (AtExt4)|
          Length = 373

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
 Frame = +2

Query: 20  SPLPVFISPPDPRHQLP-----HSPKIQITPSHRSNPDRAPRAP 136
           SP PV+ SPP P H  P     HSP     P H S P     +P
Sbjct: 234 SPPPVYKSPPPPVHYSPPPVVYHSPP---PPVHYSPPPVVYHSP 274

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>HNRL1_HUMAN (Q9BUJ2) Heterogeneous nuclear ribonucleoprotein U-like protein 1|
           (Adenovirus early region 1B-associated protein 5)
           (E1B-55 kDa-associated protein 5) (E1B-AP5)
          Length = 856

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPS 132
           P P  Y P R+PP A+ + K+ +   P   + +STP+
Sbjct: 712 PPPPSYSPARNPPGASTYNKNSN--IPGSSANTSTPT 746

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>EXTN_DAUCA (P06599) Extensin precursor|
          Length = 306

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAF---PKDPDHTEPP 105
           P P  +   +SPPP T     P  P+H+ PP
Sbjct: 215 PAPVHHYKYKSPPPPTPVYKSPPPPEHSPPP 245



 Score = 27.7 bits (60), Expect = 9.1
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTP 129
           P P+     +SPPP    P  P H E P   + S P
Sbjct: 70  PPPTPVYKYKSPPPPMHSPPPPYHFESPPPPKHSPP 105



 Score = 27.7 bits (60), Expect = 9.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 52  SPPPATAFPKDPDHTEPPKQSRSSTP 129
           SPPP    P  P+H+ PP     S P
Sbjct: 38  SPPPPEHSPPPPEHSPPPPYHYESPP 63

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>BARH2_MOUSE (Q8VIB5) BarH-like 2 homeobox protein (Bar-class homeodomain|
           protein MBH1) (Homeobox protein B-H1)
          Length = 384

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 18/61 (29%)
 Frame = +2

Query: 5   GTSLSSPLPVFISPPDP---------RHQLPHS---------PKIQITPSHRSNPDRAPR 130
           GT+ SSP+ V + PP+P          H L HS         P   + PS +  P   P+
Sbjct: 60  GTAPSSPISVTLEPPEPHLVTDGPQHHHHLHHSQQPPPPSAVPAQSLQPSPQQQPPPQPQ 119

Query: 131 A 133
           +
Sbjct: 120 S 120

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>DEDD_ECOLI (P09549) Protein dedD|
          Length = 220

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 23  PLPVFISPPDPRHQLPHSPKIQITPSHRSNP 115
           P P  ++PP P+   P  PK++  P+ +  P
Sbjct: 99  PEPAPVAPPKPKPVEPPKPKVEAPPAPKPEP 129

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>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic|
           region
          Length = 224

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPA----TAFPKDPDHTEPPKQSRSSTPS 132
           PTP    PT +PPP+    T  P  P    PP  + S  PS
Sbjct: 82  PTPIPPTPTPTPPPSPIPPTPTPSPPPSPIPPTPTPSPPPS 122



 Score = 27.7 bits (60), Expect = 9.1
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +1

Query: 22  PTPSFYLPTRSPPPATAFPKDPDHTEPP 105
           PTP    PT +PPP T  P  P  T PP
Sbjct: 69  PTPIPPTPTPTPPP-TPIPPTPTPTPPP 95

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>SIPA1_MOUSE (P46062) Signal-induced proliferation-associated protein 1 (Sipa-1)|
           (GTPase-activating protein Spa-1)
          Length = 1037

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 25  TPSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSSREE 144
           TP   L T + P A       D   PP Q +S +PSS E+
Sbjct: 850 TPDLLLVTTANPSAPG----TDRETPPSQDQSGSPSSHED 885

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>HXA3_HUMAN (O43365) Homeobox protein Hox-A3 (Hox-1E)|
          Length = 443

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 28  PSFYLPTRSPPPATAFPKDPDHTEPPKQSRSSTPSS 135
           PS   P   PPP  A P  P   +P  Q  + TP++
Sbjct: 83  PSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAA 118

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>NFAC2_MOUSE (Q60591) Nuclear factor of activated T-cells, cytoplasmic 2 (T cell|
           transcription factor NFAT1) (NFAT pre-existing subunit)
           (NF-ATp)
          Length = 1064

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 35  FISPPDPRHQLPHSPKIQITPSH 103
           F+SP  P      SP+I+ITPSH
Sbjct: 97  FLSPVKPAGASGPSPRIEITPSH 119


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.131    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,612,606
Number of Sequences: 219361
Number of extensions: 581832
Number of successful extensions: 3693
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 2722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3550
length of database: 80,573,946
effective HSP length: 24
effective length of database: 75,309,282
effective search space used: 1807422768
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result