| Clone Name | baet57d09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 0.45 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 caccgaagcaatccagatcga 121 ||||||||||||||||||||| Sbjct: 5374622 caccgaagcaatccagatcga 5374642
>ref|NM_116204.2| Arabidopsis thaliana unknown protein AT3G63390 mRNA, complete cds Length = 803 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ccaccagatccccgccacca 63 |||||||||||||||||||| Sbjct: 279 ccaccagatccccgccacca 260
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 aatccagatcgagcaccccgagct 133 |||||||||||| ||||||||||| Sbjct: 3756468 aatccagatcgaacaccccgagct 3756445
>gb|BT025528.1| Arabidopsis thaliana At3g63390 mRNA, complete cds Length = 528 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ccaccagatccccgccacca 63 |||||||||||||||||||| Sbjct: 254 ccaccagatccccgccacca 235
>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project) Length = 79153 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ccaccagatccccgccacca 63 |||||||||||||||||||| Sbjct: 33990 ccaccagatccccgccacca 34009
>gb|AY085982.1| Arabidopsis thaliana clone 20404 mRNA, complete sequence Length = 752 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ccaccagatccccgccacca 63 |||||||||||||||||||| Sbjct: 279 ccaccagatccccgccacca 260
>gb|AF053631.1| Homo sapiens citrate synthase mRNA, complete cds Length = 1636 Score = 38.2 bits (19), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 33 tttttatctccccaccagatccc 55 |||||| |||||||||||||||| Sbjct: 129 tttttacctccccaccagatccc 151
>emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on chromosome 10, complete sequence Length = 129800 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 cccagtttttatctcccca 46 ||||||||||||||||||| Sbjct: 67286 cccagtttttatctcccca 67304
>emb|AL139114.12| Human DNA sequence from clone RP11-328C23 on chromosome 9p22.3-24.1, complete sequence Length = 132139 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 tttttatctccccaccaga 51 ||||||||||||||||||| Sbjct: 31239 tttttatctccccaccaga 31257
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 ccagatccccgccaccagc 65 ||||||||||||||||||| Sbjct: 1127033 ccagatccccgccaccagc 1127051 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 975,779 Number of Sequences: 3902068 Number of extensions: 975779 Number of successful extensions: 67690 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67602 Number of HSP's gapped (non-prelim): 88 length of query: 146 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 125 effective length of database: 17,151,101,840 effective search space: 2143887730000 effective search space used: 2143887730000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)