>RHBD3_HUMAN (Q9Y3P4) Rhomboid domain-containing protein 3|
          Length = 386

 Score = 32.0 bits (71), Expect = 0.49
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 2   AYWTQTQFPSSILRPSEPTF-GSTHAWLAWGRGAFDP 109
           ++W  +  P   LRP +PT+ GS+ A L W   +F P
Sbjct: 248 SHWEDSALPPPSLRPVQPTWEGSSEAGLDWAGASFSP 284

>NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 precursor (Notch|
           4) (hNotch4) [Contains: Notch 4 extracellular
           truncation; Notch 4 intracellular domain]
          Length = 2003

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -1

Query: 121 QEASRIESTTPPCEP--CVRAPKSRLTRSENAGWKLCLCPVG 2
           QE  R E    PC P  C      +L   +++ + LCLCP G
Sbjct: 226 QEGPRCELRAGPCPPRGCSNGGTCQLMPEKDSTFHLCLCPPG 267

>TNAP3_MOUSE (Q60769) Tumor necrosis factor, alpha-induced protein 3 (EC|
           3.-.-.-) (Putative DNA binding protein A20) (Zinc finger
           protein A20)
          Length = 775

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 123 AKRRAGSKAPRPHASHACVLPKVGSLGLRMLDGNC 19
           A  +AGS APR   +  C+  + G+LG  M +G C
Sbjct: 625 ASAKAGSPAPRFQNNVPCLGRECGTLGSTMFEGYC 659

>PDXH2_RALSO (Q8XS03) Pyridoxamine 5'-phosphate oxidase 2 (EC 1.4.3.5) (PNP/PMP|
           oxidase 2) (PNPOx 2)
          Length = 213

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 19  TVSIQHSQTE*AYFWEHARMARMGAWCFRSCSPL 120
           TV+   ++   AYF   AR +R+GAW  +   PL
Sbjct: 110 TVNRVSAEEADAYFVSRARASRIGAWASKQSRPL 143


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,251,447
Number of Sequences: 219361
Number of extensions: 274913
Number of successful extensions: 1050
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 80,573,946
effective HSP length: 16
effective length of database: 77,064,170
effective search space used: 1849540080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)