ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet57c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransgly... 157 9e-36
2gb|AC161168.6| Mus musculus chromosome 1, clone RP24-364J15, com... 44 0.093
3gb|AC102788.7| Mus musculus chromosome 1, clone RP23-437G8, comp... 44 0.093
4gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosom... 40 1.5
5gb|AC121795.3| Mus musculus BAC clone RP23-421P13 from chromosom... 40 1.5
6gb|AC120541.8| Mus musculus, clone RP23-286L18, complete sequence 40 1.5
7emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on ch... 40 1.5
8gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosom... 40 1.5
9ref|XM_528809.1| PREDICTED: Pan troglodytes similar to RIKEN cDN... 38 5.8
10ref|XM_528789.1| PREDICTED: Pan troglodytes LOC473418 (LOC473418... 38 5.8
11gb|AF401203.1| Homo sapiens chAB4 multisequence family and NF1-r... 38 5.8
12gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chrom... 38 5.8
13gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromo... 38 5.8
14gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, comp... 38 5.8
15gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromo... 38 5.8
16gb|AC183918.1| Homo sapiens BAC clone RP11-170N9 from chromosome... 38 5.8
17gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8
18gb|AC138394.7| Mus musculus chromosome 3, clone RP23-333D8, comp... 38 5.8
19gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 38 5.8
20gb|BC036580.1| Homo sapiens chromosome 21 open reading frame 81,... 38 5.8
21gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromo... 38 5.8
22gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map... 38 5.8
23gb|BC063278.1| Homo sapiens cDNA clone IMAGE:4798734, partial cds 38 5.8
24emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete ch... 38 5.8
25gb|BC022023.1| Homo sapiens similar to ankyrin repeat domain 20A... 38 5.8
26emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chr... 38 5.8
27emb|CR848007.6| Human DNA sequence from clone RP11-115C9 on chro... 38 5.8
28emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on ch... 38 5.8
29emb|BX649567.3| Human DNA sequence from clone RP11-195B21 on chr... 38 5.8
30emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on ch... 38 5.8
31gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 m... 38 5.8
32ref|NM_001029999.1| Homo sapiens similar to ankyrin repeat domai... 38 5.8
33gb|BC043199.1| Homo sapiens cDNA clone MGC:44241 IMAGE:5289033, ... 38 5.8
34emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chro... 38 5.8
35emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chro... 38 5.8
36emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chr... 38 5.8
37gb|AF426257.1| Homo sapiens C21orf81 protein (C21orf81) mRNA, co... 38 5.8
38ref|NM_153750.1| Homo sapiens chromosome 21 open reading frame 8... 38 5.8
39ref|XM_932240.1| PREDICTED: Homo sapiens hypothetical protein LO... 38 5.8
40ref|XM_928873.1| PREDICTED: Homo sapiens similar to ankyrin repe... 38 5.8
41ref|XM_938860.1| PREDICTED: Homo sapiens similar to ankyrin repe... 38 5.8
42ref|XM_371535.3| PREDICTED: Homo sapiens ankyrin repeat domain 2... 38 5.8
43dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
44dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
45gb|AC122132.5| Homo sapiens BAC clone RP13-744A23 from 7, comple... 38 5.8
46gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete... 38 5.8
47emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chr... 38 5.8
48dbj|BS000149.1| Pan troglodytes chromosome 22 clone:PTB-407O15, ... 38 5.8
49dbj|BS000006.1| Pan troglodytes chromosome 22 clone:PTB-274F15, ... 38 5.8
50dbj|BS000004.1| Pan troglodytes chromosome 22 clone:PTB-080D12, ... 38 5.8
51emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chr... 38 5.8
52emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004 38 5.8
53gb|AC004527.2|AC004527 Homo sapiens chromosome 21, Neurofibromat... 38 5.8
54dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 5.8
55gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8
56gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8
57emb|AL713941.3|CNS07YP9 Oryza sativa chromosome 12, . BAC OSJNBa... 38 5.8
58gb|AC140369.2| Mus musculus BAC clone RP23-200L3 from 3, complet... 38 5.8
59gb|AC151921.1| Phaeodactylum tricornutum clone JGIAHOK-13P5, com... 38 5.8
60dbj|AP001347.1| Homo sapiens genomic DNA, chromosome 21q11.1 clo... 38 5.8
61dbj|AP001634.1| Homo sapiens genomic DNA, chromosome 21q11.1 clo... 38 5.8
62dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 38 5.8
63emb|AL355973.21| Human DNA sequence from clone RP4-660N4 on chro... 38 5.8 
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEA)
          Length = 1174

 Score =  157 bits (79), Expect = 9e-36
 Identities = 93/95 (97%), Gaps = 2/95 (2%)
 Strand = Plus / Plus

                                                                       
Query: 29  tccagcattctcagaccgagtgagcctacttttgggagcacgc-acgcatggctcgcatg 87
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1   tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 60

                                              
Query: 88  ggggcgt-ggtgctttcgatcctgctcgcctcttg 121
           ||||||| |||||||||||||||||||||||||||
Sbjct: 61  ggggcgtcggtgctttcgatcctgctcgcctcttg 95
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>gb|AC161168.6| Mus musculus chromosome 1, clone RP24-364J15, complete sequence
          Length = 163341

 Score = 44.1 bits (22), Expect = 0.093
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 6     actggacacaaacacagtttcc 27
             ||||||||||||||||||||||
Sbjct: 59937 actggacacaaacacagtttcc 59958
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>gb|AC102788.7| Mus musculus chromosome 1, clone RP23-437G8, complete sequence
          Length = 212403

 Score = 44.1 bits (22), Expect = 0.093
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 6      actggacacaaacacagtttcc 27
              ||||||||||||||||||||||
Sbjct: 196299 actggacacaaacacagtttcc 196278
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>gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosome 17, complete
             sequence
          Length = 157958

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gcctactggacacaaacaca 21
             ||||||||||||||||||||
Sbjct: 23521 gcctactggacacaaacaca 23540
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>gb|AC121795.3| Mus musculus BAC clone RP23-421P13 from chromosome 17, complete sequence
          Length = 204354

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      gcctactggacacaaacaca 21
              ||||||||||||||||||||
Sbjct: 124202 gcctactggacacaaacaca 124221
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>gb|AC120541.8| Mus musculus, clone RP23-286L18, complete sequence
          Length = 171942

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    cacaaacacagtttccatccagca 35
             |||||||||| |||||||||||||
Sbjct: 51666 cacaaacacattttccatccagca 51643
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>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete
             sequence
          Length = 192913

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ccatccagcattctcagacc 45
             ||||||||||||||||||||
Sbjct: 68495 ccatccagcattctcagacc 68514
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>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence
          Length = 219361

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ccatccagcattctcagacc 45
             ||||||||||||||||||||
Sbjct: 56171 ccatccagcattctcagacc 56190
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>ref|XM_528809.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 4921515A04
            (LOC473438), mRNA
          Length = 2931

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 37   tctcagaccgagtgagcct 55
            |||||||||||||||||||
Sbjct: 1002 tctcagaccgagtgagcct 1020
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>ref|XM_528789.1| PREDICTED: Pan troglodytes LOC473418 (LOC473418), mRNA
          Length = 2202

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  tctcagaccgagtgagcct 55
           |||||||||||||||||||
Sbjct: 492 tctcagaccgagtgagcct 510
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>gb|AF401203.1| Homo sapiens chAB4 multisequence family and NF1-related multisequence
             family regions
          Length = 86723

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 83115 tctcagaccgagtgagcct 83133
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>gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chromosome 2, complete
             sequence
          Length = 139973

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 32761 tctcagaccgagtgagcct 32779
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>gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromosome 2, complete
             sequence
          Length = 211457

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 93643 tctcagaccgagtgagcct 93625
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>gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, complete sequence
          Length = 191237

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 20294 tctcagaccgagtgagcct 20276
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>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete
              sequence
          Length = 179528

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     tctcagaccgagtgagcct 55
              |||||||||||||||||||
Sbjct: 110300 tctcagaccgagtgagcct 110318
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>gb|AC183918.1| Homo sapiens BAC clone RP11-170N9 from chromosome unknown, complete
             sequence
          Length = 151064

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 90195 tctcagaccgagtgagcct 90213
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>gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0024E08, complete sequence
          Length = 131946

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 29    tccagcattctcagaccga 47
             |||||||||||||||||||
Sbjct: 98131 tccagcattctcagaccga 98149
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>gb|AC138394.7| Mus musculus chromosome 3, clone RP23-333D8, complete sequence
          Length = 227600

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 14     caaacacagtttccatcca 32
              |||||||||||||||||||
Sbjct: 178139 caaacacagtttccatcca 178121
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 33      gcattctcagaccgagtga 51
               |||||||||||||||||||
Sbjct: 4051644 gcattctcagaccgagtga 4051662
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>gb|BC036580.1| Homo sapiens chromosome 21 open reading frame 81, mRNA (cDNA clone
           IMAGE:4793793), with apparent retained intron
          Length = 2574

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  tctcagaccgagtgagcct 55
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291
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>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete
              sequence
          Length = 192494

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     tctcagaccgagtgagcct 55
              |||||||||||||||||||
Sbjct: 191209 tctcagaccgagtgagcct 191191
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>gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map 17, complete sequence
          Length = 143758

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    ccatccagcattctcagac 44
             |||||||||||||||||||
Sbjct: 84278 ccatccagcattctcagac 84296
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>gb|BC063278.1| Homo sapiens cDNA clone IMAGE:4798734, partial cds
          Length = 2567

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  tctcagaccgagtgagcct 55
           |||||||||||||||||||
Sbjct: 304 tctcagaccgagtgagcct 286
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>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12
          Length = 300000

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 96    gtgctttcgatcctgctcg 114
             |||||||||||||||||||
Sbjct: 41157 gtgctttcgatcctgctcg 41175
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>gb|BC022023.1| Homo sapiens similar to ankyrin repeat domain 20A, mRNA (cDNA
          clone MGC:26718 IMAGE:4824658), complete cds
          Length = 2088

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 37 tctcagaccgagtgagcct 55
          |||||||||||||||||||
Sbjct: 50 tctcagaccgagtgagcct 32
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>emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chromosome 9 Contains three
              novel pseudogenes, the gene for a novel protein similar to
              ankyrin repeat domain 20A (ANKRD20A), the gene for a  novel
              protein similar to Ankyrin repeat domain protein 18A
              (LOC441424), a pseudogene similar to part of cytochrome
              P450 family protein, a novel zinc finger pseudogene and a
              CpG island, complete sequence
          Length = 161157

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     tctcagaccgagtgagcct 55
              |||||||||||||||||||
Sbjct: 107687 tctcagaccgagtgagcct 107705
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>emb|CR848007.6| Human DNA sequence from clone RP11-115C9 on chromosome 9 Contains a
              calponin 2 (CNN2) pseudogene, a novel zinc finger
              pseudogene, a pseudogene similar to part of cytochrome
              P450, subfamily IVF, a chromosome 2 open reading frame 14
              (C2orf14) pseudogene, a pseudogene similar to part of
              sorting nexin associated golgi protein 1 (SNAG1), a
              melanoma antigen (LOC51152) pseudogene, four novel
              pseudogenes and an ankyrin repeat domain 20A (ANKRD20A)
              pseudogene, complete sequence
          Length = 149891

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     tctcagaccgagtgagcct 55
              |||||||||||||||||||
Sbjct: 122112 tctcagaccgagtgagcct 122130
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>emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on chromosome 9 Contains three
              novel pseudogenes, a pseudogene similar to part of meprin
              A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
              similar to part of G protein-coupled receptor 116 (GPR116),
              two novel genes, the 5' end of a novel gene similar to
              ankyrin repeat domain 20A (ANKRD20A) and three CpG islands,
              complete sequence
          Length = 165886

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     tctcagaccgagtgagcct 55
              |||||||||||||||||||
Sbjct: 153912 tctcagaccgagtgagcct 153894
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>emb|BX649567.3| Human DNA sequence from clone RP11-195B21 on chromosome 9 Contains a
             novel pseudogene, the gene for a novel protein similar to
             ankyrin repeat domain 20A (ANKRD20A), a novel gene and a
             CpG island, complete sequence
          Length = 99502

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 38140 tctcagaccgagtgagcct 38122
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>emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on chromosome 9 Contains a
              pseudogene similar to part of sorting nexin associated
              golgi protein 1 (SNAG1), the ANKRD20A gene for ankyrin
              repeat domain 20A, five novel genes, a pseudogene similar
              to part of eprin A, alpha (PABA peptide hydrolase) (MEP1A)
              and a CpG island, complete sequence
          Length = 180498

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     tctcagaccgagtgagcct 55
              |||||||||||||||||||
Sbjct: 100469 tctcagaccgagtgagcct 100487
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>gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 map 17, complete
             sequence
          Length = 202803

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    ccatccagcattctcagac 44
             |||||||||||||||||||
Sbjct: 62451 ccatccagcattctcagac 62469
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>ref|NM_001029999.1| Homo sapiens similar to ankyrin repeat domain 20A (MGC26718),
          mRNA
          Length = 2088

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 37 tctcagaccgagtgagcct 55
          |||||||||||||||||||
Sbjct: 50 tctcagaccgagtgagcct 32
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>gb|BC043199.1| Homo sapiens cDNA clone MGC:44241 IMAGE:5289033, complete cds
          Length = 2572

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  tctcagaccgagtgagcct 55
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291
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>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a
            pseudogene similar to part of a novel protein
            (DKFZp434A171), a pseudogene similar to part of meprin A,
            alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
            similar to part of a novel transmembrane receptor protein
            and two novel pseudogenes, complete sequence
          Length = 189495

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 37   tctcagaccgagtgagcct 55
            |||||||||||||||||||
Sbjct: 6087 tctcagaccgagtgagcct 6105
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>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete
             sequence
          Length = 158069

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 56786 tctcagaccgagtgagcct 56804
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>emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chromosome 21, complete
             sequence
          Length = 152296

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 44098 tctcagaccgagtgagcct 44080
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>gb|AF426257.1| Homo sapiens C21orf81 protein (C21orf81) mRNA, complete cds
          Length = 1102

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  tctcagaccgagtgagcct 55
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291
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>ref|NM_153750.1| Homo sapiens chromosome 21 open reading frame 81 (C21orf81), mRNA
          Length = 1102

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  tctcagaccgagtgagcct 55
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291
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>ref|XM_932240.1| PREDICTED: Homo sapiens hypothetical protein LOC644558 (LOC644558),
           mRNA
          Length = 831

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  tctcagaccgagtgagcct 55
           |||||||||||||||||||
Sbjct: 762 tctcagaccgagtgagcct 744
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>ref|XM_928873.1| PREDICTED: Homo sapiens similar to ankyrin repeat domain 20
          family, member A2, transcript variant 1 (LOC392331),
          mRNA
          Length = 4125

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 37 tctcagaccgagtgagcct 55
          |||||||||||||||||||
Sbjct: 39 tctcagaccgagtgagcct 21
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>ref|XM_938860.1| PREDICTED: Homo sapiens similar to ankyrin repeat domain 20
          family, member A2, transcript variant 1 (LOC648303),
          mRNA
          Length = 4122

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 37 tctcagaccgagtgagcct 55
          |||||||||||||||||||
Sbjct: 39 tctcagaccgagtgagcct 21
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>ref|XM_371535.3| PREDICTED: Homo sapiens ankyrin repeat domain 20B, transcript
          variant 1 (ANKRD20B), mRNA
          Length = 4122

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 37 tctcagaccgagtgagcct 55
          |||||||||||||||||||
Sbjct: 39 tctcagaccgagtgagcct 21
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 65       agcacgcacgcatggctcg 83
                |||||||||||||||||||
Sbjct: 17044996 agcacgcacgcatggctcg 17044978
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 29       tccagcattctcagaccga 47
                |||||||||||||||||||
Sbjct: 26074564 tccagcattctcagaccga 26074582
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>gb|AC122132.5| Homo sapiens BAC clone RP13-744A23 from 7, complete sequence
          Length = 73078

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    acaaacacagtttccatcc 31
             |||||||||||||||||||
Sbjct: 26199 acaaacacagtttccatcc 26181
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>gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete sequence
          Length = 127075

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 30119 tctcagaccgagtgagcct 30137
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>emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chromosome 22, complete
              sequence
          Length = 219376

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     tctcagaccgagtgagcct 55
              |||||||||||||||||||
Sbjct: 160431 tctcagaccgagtgagcct 160413
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>dbj|BS000149.1| Pan troglodytes chromosome 22 clone:PTB-407O15, map 22, complete
             sequences
          Length = 50768

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 16871 tctcagaccgagtgagcct 16853
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>dbj|BS000006.1| Pan troglodytes chromosome 22 clone:PTB-274F15, map 22, complete
             sequences
          Length = 118294

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 40213 tctcagaccgagtgagcct 40195
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>dbj|BS000004.1| Pan troglodytes chromosome 22 clone:PTB-080D12, map 22, complete
             sequences
          Length = 86840

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 54056 tctcagaccgagtgagcct 54074
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>emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chromosome 22, complete
             sequence
          Length = 161147

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 58349 tctcagaccgagtgagcct 58331
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>emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004
          Length = 340000

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     tctcagaccgagtgagcct 55
              |||||||||||||||||||
Sbjct: 338686 tctcagaccgagtgagcct 338704
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>gb|AC004527.2|AC004527 Homo sapiens chromosome 21, Neurofibromatosis 1 (NF1) related locus,
             complete sequence
          Length = 131971

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 76059 tctcagaccgagtgagcct 76077
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>dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, section 4/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 83628 tctcagaccgagtgagcct 83610
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 29       tccagcattctcagaccga 47
                |||||||||||||||||||
Sbjct: 26393260 tccagcattctcagaccga 26393278
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 65       agcacgcacgcatggctcg 83
                |||||||||||||||||||
Sbjct: 16998372 agcacgcacgcatggctcg 16998354
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>emb|AL713941.3|CNS07YP9 Oryza sativa chromosome 12, . BAC OSJNBa0006M08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 136254

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     agcacgcacgcatggctcg 83
              |||||||||||||||||||
Sbjct: 103747 agcacgcacgcatggctcg 103765
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>gb|AC140369.2| Mus musculus BAC clone RP23-200L3 from 3, complete sequence
          Length = 191613

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 14     caaacacagtttccatcca 32
              |||||||||||||||||||
Sbjct: 133232 caaacacagtttccatcca 133250
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>gb|AC151921.1| Phaeodactylum tricornutum clone JGIAHOK-13P5, complete sequence
          Length = 38085

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 13    acaaacacagtttccatccagca 35
             |||||||||| ||||||||||||
Sbjct: 15861 acaaacacagcttccatccagca 15839
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>dbj|AP001347.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:R73I15, q-centromere
             region, complete sequence
          Length = 134926

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 28891 tctcagaccgagtgagcct 28873
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>dbj|AP001634.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:B585O4, D21S290-LL56
             region, complete sequence
          Length = 71829

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    tctcagaccgagtgagcct 55
             |||||||||||||||||||
Sbjct: 15920 tctcagaccgagtgagcct 15938
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>dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-681B3, complete
              sequence
          Length = 182424

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     tctcagaccgagtgagcct 55
              |||||||||||||||||||
Sbjct: 116836 tctcagaccgagtgagcct 116818
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>emb|AL355973.21| Human DNA sequence from clone RP4-660N4 on chromosome 1, complete
              sequence
          Length = 110898

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     tctcagaccgagtgagcct 55
              |||||||||||||||||||
Sbjct: 100273 tctcagaccgagtgagcct 100291


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 899,854
Number of Sequences: 3902068
Number of extensions: 899854
Number of successful extensions: 48238
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48114
Number of HSP's gapped (non-prelim): 122
length of query: 124
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 103
effective length of database: 17,151,101,840
effective search space: 1766563489520
effective search space used: 1766563489520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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