ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet57c08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467029.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1524 Score = 60.0 bits (30), Expect = 2e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 90 gaggatgtctgcgctgagaagtagcctcaggccgtacgaggc 131 ||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 149 gaggatgtccgcgctgaggagtagccttaggccgtacgaggc 190 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 gtcgtcgttcgcgcaccaccac 72 |||||||||||||||||||||| Sbjct: 101 gtcgtcgttcgcgcaccaccac 122
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 2e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 90 gaggatgtctgcgctgagaagtagcctcaggccgtacgaggc 131 ||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 26015748 gaggatgtccgcgctgaggagtagccttaggccgtacgaggc 26015789 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 gtcgtcgttcgcgcaccaccac 72 |||||||||||||||||||||| Sbjct: 26015580 gtcgtcgttcgcgcaccaccac 26015601
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 60.0 bits (30), Expect = 2e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 90 gaggatgtctgcgctgagaagtagcctcaggccgtacgaggc 131 ||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 23194 gaggatgtccgcgctgaggagtagccttaggccgtacgaggc 23235 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 gtcgtcgttcgcgcaccaccac 72 |||||||||||||||||||||| Sbjct: 23026 gtcgtcgttcgcgcaccaccac 23047
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 60.0 bits (30), Expect = 2e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 90 gaggatgtctgcgctgagaagtagcctcaggccgtacgaggc 131 ||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 79621 gaggatgtccgcgctgaggagtagccttaggccgtacgaggc 79662 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 gtcgtcgttcgcgcaccaccac 72 |||||||||||||||||||||| Sbjct: 79453 gtcgtcgttcgcgcaccaccac 79474
>dbj|AK109477.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C09, full insert sequence Length = 1524 Score = 60.0 bits (30), Expect = 2e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 90 gaggatgtctgcgctgagaagtagcctcaggccgtacgaggc 131 ||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 149 gaggatgtccgcgctgaggagtagccttaggccgtacgaggc 190 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 gtcgtcgttcgcgcaccaccac 72 |||||||||||||||||||||| Sbjct: 101 gtcgtcgttcgcgcaccaccac 122
>emb|AL772237.12| Mouse DNA sequence from clone RP23-14I13 on chromosome 4, complete sequence Length = 169452 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 ccctttcccactcctcctcctc 29 |||||||||||||||||||||| Sbjct: 19596 ccctttcccactcctcctcctc 19575
>gb|BC004869.2| Homo sapiens chromosome 6 open reading frame 168, mRNA (cDNA clone MGC:10706 IMAGE:3834272), complete cds Length = 2034 Score = 42.1 bits (21), Expect = 0.42 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 ctcctcctcctctgcagccgcctcc 42 ||||||||||||||| ||||||||| Sbjct: 115 ctcctcctcctctgccgccgcctcc 139
>emb|AL034371.16|HS273F20 Human DNA sequence from clone RP1-273F20 on chromosome 6q16.1-16.3 Contains the gene for a novel protein and a CpG island, complete sequence Length = 111253 Score = 42.1 bits (21), Expect = 0.42 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 ctcctcctcctctgcagccgcctcc 42 ||||||||||||||| ||||||||| Sbjct: 5238 ctcctcctcctctgccgccgcctcc 5262
>emb|AJ505821.1|LPA505821 Lama pacos partial adra2b gene for alpha 2B adrenergic receptor, adra2b-2 allele Length = 1180 Score = 42.1 bits (21), Expect = 0.42 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctcc 42 ||||||||||||||||||| ||||| Sbjct: 871 ctcctcctcctctgcagcctcctcc 847
>emb|AJ315941.1|LPA315941 Lama pacos partial adra2b gene for alpha 2B adrenergic receptor Length = 1197 Score = 42.1 bits (21), Expect = 0.42 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctcc 42 ||||||||||||||||||| ||||| Sbjct: 888 ctcctcctcctctgcagcctcctcc 864 Score = 42.1 bits (21), Expect = 0.42 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctcc 42 ||||||||||||||||||| ||||| Sbjct: 870 ctcctcctcctctgcagcctcctcc 846
>gb|AC007982.2| Homo sapiens chromosome 17, clone RP11-44H5, complete sequence Length = 186360 Score = 42.1 bits (21), Expect = 0.42 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 ctaccctttcccactcctcctcctc 29 |||| |||||||||||||||||||| Sbjct: 50000 ctactctttcccactcctcctcctc 50024
>gb|AC020556.7| Homo sapiens BAC clone RP11-507B10 from 4, complete sequence Length = 186092 Score = 42.1 bits (21), Expect = 0.42 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 ctcctcctcctctgcagccgcctcc 42 ||||||||||||||| ||||||||| Sbjct: 85962 ctcctcctcctctgccgccgcctcc 85986
>ref|NM_032511.1| Homo sapiens chromosome 6 open reading frame 168 (C6orf168), mRNA Length = 2034 Score = 42.1 bits (21), Expect = 0.42 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 ctcctcctcctctgcagccgcctcc 42 ||||||||||||||| ||||||||| Sbjct: 115 ctcctcctcctctgccgccgcctcc 139
>gb|BC011583.1| Homo sapiens chromosome 6 open reading frame 168, mRNA (cDNA clone MGC:20396 IMAGE:4577456), complete cds Length = 2034 Score = 42.1 bits (21), Expect = 0.42 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 ctcctcctcctctgcagccgcctcc 42 ||||||||||||||| ||||||||| Sbjct: 115 ctcctcctcctctgccgccgcctcc 139
>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence Length = 182415 Score = 42.1 bits (21), Expect = 0.42 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccctaccctttcccactcc 21 ||||||||||||||||||||| Sbjct: 88162 ctccctaccctttcccactcc 88142
>gb|AC121297.20| Mus musculus chromosome 1, clone RP23-326H11, complete sequence Length = 207496 Score = 40.1 bits (20), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgcc 45 ||||||||||||||| |||||| ||||| Sbjct: 2105 ctcctcctcctctgccgccgccgccgcc 2078
>gb|AC146030.3| Pan troglodytes BAC clone RP43-124E21 from chromosome 7, complete sequence Length = 169275 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccctaccctttcccactcctcctc 26 |||| ||||||||||||||||||| Sbjct: 55115 ccctgccctttcccactcctcctc 55092
>ref|XM_381726.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01550.1) partial mRNA Length = 432 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tcctctgcagccgcctccgc 44 |||||||||||||||||||| Sbjct: 419 tcctctgcagccgcctccgc 400
>emb|AL355353.23| Human DNA sequence from clone RP11-385F7 on chromosome 6 Contains the 5' end of the CD2AP gene for CD2-associated protein and three CpG islands, complete sequence Length = 141605 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctaccctttcccactcctc 23 |||||||||||||||||||| Sbjct: 103692 cctaccctttcccactcctc 103673
>emb|AL160006.16| Human DNA sequence from clone RP4-773N10 on chromosome 1p13.1-13.3 Contains the 3' end of gene KIAA1761 (FLJ14743) and the ALX3 gene for aristaless-like homeobox 3, complete sequence Length = 91783 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cccactcctcctcctctgca 33 |||||||||||||||||||| Sbjct: 56392 cccactcctcctcctctgca 56373
>emb|AL645994.7| Mouse DNA sequence from clone RP23-104F14 on chromosome 11 Contains the Upp gene for uridine phosphorylase, a polymerase (RNA) II (DNA directed) (Polr2c) pseudogene and the 5' end of the Abca13 gene for ATP-binding cassette sub-family A (ABC1) member 13, complete sequence Length = 136162 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 cctttcccactcctcctcct 28 |||||||||||||||||||| Sbjct: 91746 cctttcccactcctcctcct 91765
>gb|AC124301.6| Homo sapiens chromosome 11, clone RP11-358H18, complete sequence Length = 145713 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cccactcctcctcctctgca 33 |||||||||||||||||||| Sbjct: 12389 cccactcctcctcctctgca 12370
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 gccgcctccgccatgtcgtcgtcg 57 |||||| ||||||||||||||||| Sbjct: 88972 gccgccgccgccatgtcgtcgtcg 88949
>dbj|AK125543.1| Homo sapiens cDNA FLJ43555 fis, clone PROST2018437, highly similar to Homo sapiens RAB35, member RAS oncogene family (RAB35) Length = 2449 Score = 40.1 bits (20), Expect = 1.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 13 tcccactcctcctcctctgcagccgcctccgc 44 |||| |||||||||||| ||||||||| |||| Sbjct: 714 tccccctcctcctcctcagcagccgccgccgc 683
>gb|AC114500.1| Homo sapiens BAC clone RP11-312K17 from 7, complete sequence Length = 34036 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccctaccctttcccactcctcctc 26 |||| ||||||||||||||||||| Sbjct: 30187 ccctgccctttcccactcctcctc 30164
>gb|AC093814.3| Homo sapiens BAC clone RP11-362I16 from 4, complete sequence Length = 163201 Score = 40.1 bits (20), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 18 ctcctcctcctctgcagccgcctccgcc 45 ||||||||||||||| |||||| ||||| Sbjct: 124446 ctcctcctcctctgccgccgccgccgcc 124473
>gb|AC154569.2| Mus musculus BAC clone RP23-385I2 from chromosome 17, complete sequence Length = 180258 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcccactcctcctcctctgc 32 |||||||||||||||||||| Sbjct: 143834 tcccactcctcctcctctgc 143815
>gb|BC050909.1| Mus musculus, zinc finger protein 238, clone IMAGE:6417039, mRNA, partial cds Length = 3881 Score = 40.1 bits (20), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgcc 45 ||||||||||||||| |||||| ||||| Sbjct: 147 ctcctcctcctctgccgccgccgccgcc 120
>gb|AC144908.17| Mus musculus chromosome 5, clone RP23-102O19, complete sequence Length = 212299 Score = 40.1 bits (20), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 ccctaccctttcccactcctcctcctct 30 |||| ||||||||| ||||||||||||| Sbjct: 86587 cccttccctttccccctcctcctcctct 86560
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgcc 45 ||||||||||||||| |||||| ||||| Sbjct: 32030455 ctcctcctcctctgccgccgccgccgcc 32030428 Score = 38.2 bits (19), Expect = 6.6 Identities = 28/31 (90%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgccatg 48 |||||||||||| || |||||| |||||||| Sbjct: 23759691 ctcctcctcctccgccgccgccgccgccatg 23759661
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctc 41 ||||||||||||||| |||||||| Sbjct: 20461712 ctcctcctcctctgccgccgcctc 20461689 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 ccgccatgtcgtcgtcgtt 59 ||||||||||||||||||| Sbjct: 15009834 ccgccatgtcgtcgtcgtt 15009852
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 gccgcctccgccatgtcgtcgtcg 57 |||||| ||||||||||||||||| Sbjct: 23264915 gccgccgccgccatgtcgtcgtcg 23264892 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 tcccactcctcctcctctg 31 ||||||||||||||||||| Sbjct: 11147263 tcccactcctcctcctctg 11147281
>gb|AC154469.3| Mus musculus BAC clone RP24-158M15 from chromosome 17, complete sequence Length = 151047 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcccactcctcctcctctgc 32 |||||||||||||||||||| Sbjct: 26212 tcccactcctcctcctctgc 26193
>gb|AC124056.8| Homo sapiens chromosome 11, clone RP5-1082L12, complete sequence Length = 115971 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cccactcctcctcctctgca 33 |||||||||||||||||||| Sbjct: 77839 cccactcctcctcctctgca 77858
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctc 41 ||||||||||||||| |||||||| Sbjct: 92342 ctcctcctcctctgccgccgcctc 92319
>dbj|AK024937.1| Homo sapiens cDNA: FLJ21284 fis, clone COL01911 Length = 2504 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ccctaccctttcccactcctcctc 26 |||| ||||||||||||||||||| Sbjct: 454 ccctgccctttcccactcctcctc 477
>dbj|AK073548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C05, full insert sequence Length = 1078 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 gccgcctccgccatgtcgtcgtcg 57 |||||| ||||||||||||||||| Sbjct: 370 gccgccgccgccatgtcgtcgtcg 393
>gb|AC004812.1|AC004812 Homo sapiens PAC clone 267D11 from 12, complete sequence Length = 138532 Score = 40.1 bits (20), Expect = 1.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 13 tcccactcctcctcctctgcagccgcctccgc 44 |||| |||||||||||| ||||||||| |||| Sbjct: 62841 tccccctcctcctcctcagcagccgccgccgc 62872
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 40.1 bits (20), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgcc 45 ||||||||||||||| |||||| ||||| Sbjct: 51162 ctcctcctcctctgccgccgccgccgcc 51135
>gb|AC004736.1|AC004736 Human Chromosome 11p14.3 PAC clone pDJ1082L12 containing KNCN1 and MyoD, complete sequence Length = 115958 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cccactcctcctcctctgca 33 |||||||||||||||||||| Sbjct: 38124 cccactcctcctcctctgca 38105
>emb|CT010429.11| Mouse DNA sequence from clone RP23-306H20 on chromosome 17, complete sequence Length = 191390 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcccactcctcctcctctgc 32 |||||||||||||||||||| Sbjct: 180577 tcccactcctcctcctctgc 180596
>gb|AC120370.9| Mus musculus chromosome 1, clone RP24-441N3, complete sequence Length = 163929 Score = 40.1 bits (20), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 18 ctcctcctcctctgcagccgcctccgcc 45 ||||||||||||||| |||||| ||||| Sbjct: 38201 ctcctcctcctctgccgccgccgccgcc 38228
>dbj|AB001869.1| Anolis carolinensis Brain-2 gene, complete cds Length = 2954 Score = 40.1 bits (20), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgcc 45 |||||||||||| || |||||||||||| Sbjct: 1140 ctcctcctcctccgccgccgcctccgcc 1113
>gb|AC108829.13| Mus musculus chromosome 3, clone RP23-159D18, complete sequence Length = 184470 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 tttcccactcctcctcctc 29 ||||||||||||||||||| Sbjct: 2910 tttcccactcctcctcctc 2928
>gb|AC153488.1| Tribolium castaneum BAC T.cast_C24H10 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 40580 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 ctccgccatgtcgtcgtcg 57 ||||||||||||||||||| Sbjct: 40327 ctccgccatgtcgtcgtcg 40345
>gb|AC152927.1| Tribolium castaneum BAC T.cast_C19N19 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 137018 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 ctccgccatgtcgtcgtcg 57 ||||||||||||||||||| Sbjct: 13479 ctccgccatgtcgtcgtcg 13461
>gb|AC163104.2| Mus musculus BAC clone RP23-332A4 from chromosome 6, complete sequence Length = 195179 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 11 tttcccactcctcctcctctgca 33 ||||||||||| ||||||||||| Sbjct: 89729 tttcccactccccctcctctgca 89751
>ref|XM_481724.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1122 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 ccgccatgtcgtcgtcgtt 59 ||||||||||||||||||| Sbjct: 679 ccgccatgtcgtcgtcgtt 661
>ref|NM_191147.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 939 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 31 gcagccgcctccgccatgtcgtcgtcg 57 ||||||| |||| |||||||||||||| Sbjct: 788 gcagccgtctcctccatgtcgtcgtcg 762
>ref|XM_516489.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC460403), mRNA Length = 3136 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||||| ||||||||||||| Sbjct: 767 ctcctctgccgccgcctccgcca 789
>ref|XM_472858.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 38.2 bits (19), Expect = 6.6 Identities = 28/31 (90%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgccatg 48 |||||||||||| || |||||| |||||||| Sbjct: 720 ctcctcctcctccgccgccgccgccgccatg 690
>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224115 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 ccctttcccactcctcctcctct 30 |||||||||||||| |||||||| Sbjct: 44837 ccctttcccactccccctcctct 44815
>gb|AY756080.1| Craterostigma plantagineum desiccation tolerance 2 (CDT-2) mRNA, complete sequence Length = 695 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 23 cctcctctgcagccgcctccgcc 45 |||||||||||||||||| |||| Sbjct: 98 cctcctctgcagccgcctgcgcc 120
>gb|AC101728.10| Mus musculus chromosome 19, clone RP23-328I5, complete sequence Length = 184577 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 7 accctttcccactcctcctcctc 29 ||||| ||||||||||||||||| Sbjct: 172206 accctctcccactcctcctcctc 172228
>gb|AC101691.7| Mus musculus chromosome 19, clone RP23-220B4, complete sequence Length = 175552 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 7 accctttcccactcctcctcctc 29 ||||| ||||||||||||||||| Sbjct: 9662 accctctcccactcctcctcctc 9684
>gb|AC169083.1| Mus musculus chromosome 3, clone RP23-28D7, complete sequence Length = 215143 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 tttcccactcctcctcctc 29 ||||||||||||||||||| Sbjct: 178709 tttcccactcctcctcctc 178691
>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0018H09, complete sequence Length = 155329 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 tcccactcctcctcctctg 31 ||||||||||||||||||| Sbjct: 49517 tcccactcctcctcctctg 49535
>ref|NM_013286.3| Homo sapiens RNA binding motif protein 15B (RBM15B), mRNA Length = 6620 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||||| ||||||||||||| Sbjct: 438 ctcctctgccgccgcctccgcca 460
>ref|NM_001013375.1| Mus musculus WD repeat domain 50 (Wdr50), mRNA Length = 2613 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgc 44 ||||||||||||||| |||||| |||| Sbjct: 298 ctcctcctcctctgccgccgccgccgc 272
>gb|AC137980.4| Mus musculus BAC clone RP24-69K24 from chromosome 9, complete sequence Length = 221263 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 ttcccactcctcctcctct 30 ||||||||||||||||||| Sbjct: 143307 ttcccactcctcctcctct 143325
>gb|AC165280.3| Mus musculus chromosome 3, clone RP23-389C4, complete sequence Length = 201348 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 tttcccactcctcctcctc 29 ||||||||||||||||||| Sbjct: 124098 tttcccactcctcctcctc 124080
>gb|AC073297.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-167N24, complete sequence Length = 96335 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 2 tccctaccctttcccactcctcc 24 ||||||||||||||| ||||||| Sbjct: 27685 tccctaccctttccctctcctcc 27707
>gb|AC121798.3| Mus musculus BAC clone RP23-426H21 from chromosome 2, complete sequence Length = 209189 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 ccctttcccactcctcctcctct 30 ||||||||| ||||||||||||| Sbjct: 143776 ccctttccccctcctcctcctct 143798
>gb|AC127311.3| Mus musculus BAC clone RP23-301C7 from 6, complete sequence Length = 224182 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 tttcccactcctcctcctctgca 33 ||||||||||| ||||||||||| Sbjct: 216423 tttcccactccccctcctctgca 216401
>gb|AC122898.4| Mus musculus BAC clone RP23-71K9 from 1, complete sequence Length = 230945 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 accctttcccactcctcct 25 ||||||||||||||||||| Sbjct: 72295 accctttcccactcctcct 72277
>gb|AC100752.10| Mus musculus chromosome 3, clone RP23-2A4, complete sequence Length = 208757 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 tttcccactcctcctcctc 29 ||||||||||||||||||| Sbjct: 127606 tttcccactcctcctcctc 127588
>ref|XM_786837.1| PREDICTED: Strongylocentrotus purpuratus similar to RNA binding motif protein 5 (LOC587083), mRNA Length = 1611 Score = 38.2 bits (19), Expect = 6.6 Identities = 28/31 (90%) Strand = Plus / Plus Query: 4 cctaccctttcccactcctcctcctctgcag 34 ||||||| |||| ||||||||||||| |||| Sbjct: 1336 cctaccccttcctactcctcctcctcggcag 1366
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 38.2 bits (19), Expect = 6.6 Identities = 32/35 (91%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 36 cgcctccgccatgtcgtcgtcgttcgcgcaccacc 70 ||||||||||||| ||||||||||| |||||||| Sbjct: 875265 cgcctccgccatgatgtcgtcgttcg-gcaccacc 875232
>emb|AL096766.12|HSDA59H18 Human DNA sequence from clone RP6-59H18 on chromosome 22, complete sequence Length = 70890 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 tcccactcctcctcctctg 31 ||||||||||||||||||| Sbjct: 50148 tcccactcctcctcctctg 50166
>emb|AL663078.8| Mouse DNA sequence from clone RP23-440P13 on chromosome 11 Contains the gene for a novel protein (6230425C22Rik) similar to Homo sapiens CGI-48 protein, the 5' end of the Mbtd1 gene for mbt domain containing 1 and one CpG island, complete sequence Length = 126275 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 18 ctcctcctcctctgcagccgcctccgc 44 ||||||||||||||| |||||| |||| Sbjct: 92499 ctcctcctcctctgccgccgccgccgc 92525
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 38.2 bits (19), Expect = 6.6 Identities = 28/31 (90%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgccatg 48 |||||||||||| || |||||| |||||||| Sbjct: 80603 ctcctcctcctccgccgccgccgccgccatg 80573
>emb|AJ617823.1| Felis catus partial cryab gene for HspB5 protein and partial mkbp gene for HspB2 protein Length = 1281 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 ctcctcctcctctgcagcc 36 ||||||||||||||||||| Sbjct: 527 ctcctcctcctctgcagcc 545
>emb|BX511261.12| Zebrafish DNA sequence from clone DKEYP-59G7 in linkage group 1, complete sequence Length = 185266 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 6 taccctttcccactcctcctcct 28 |||||||| |||||||||||||| Sbjct: 166155 tacccttttccactcctcctcct 166177
>emb|AJ866718.1| Pan troglodytes mRNA for protein xylosyltransferase (xt-I gene) Length = 2838 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 19 tcctcctcctctgcagccgcctccgcc 45 ||||||||||| ||||||||| ||||| Sbjct: 267 tcctcctcctccgcagccgccgccgcc 241
>gb|AC107979.7| Homo sapiens chromosome 15, clone CTD-3049M7, complete sequence Length = 148290 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 ccctttcccactcctcctcctct 30 ||||||||| ||||||||||||| Sbjct: 20855 ccctttccctctcctcctcctct 20877
>gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from chromosome unknown, complete sequence Length = 188107 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 cctttcccactcctcctcc 27 ||||||||||||||||||| Sbjct: 103199 cctttcccactcctcctcc 103217
>gb|AC021642.14| Mus musculus chromosome 10 clone RP23-113O5, containing myf5 and myf6, complete sequence Length = 203839 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 ttcccactcctcctcctct 30 ||||||||||||||||||| Sbjct: 79753 ttcccactcctcctcctct 79735
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 ccctgcaggcggagaggat 95 ||||||||||||||||||| Sbjct: 1073097 ccctgcaggcggagaggat 1073079
>gb|AC107623.2| Homo sapiens chromosome 3 clone RP11-648C16, complete sequence Length = 176901 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 actcctcctcctctgcagc 35 ||||||||||||||||||| Sbjct: 101705 actcctcctcctctgcagc 101687
>gb|AC110023.3| Homo sapiens chromosome 15, clone RP11-739G5, complete sequence Length = 166975 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 ccctttcccactcctcctcctct 30 ||||||||| ||||||||||||| Sbjct: 156793 ccctttccctctcctcctcctct 156815
>dbj|AK154637.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101N03 product:Weakly similar to hypothetical WD-repeat protein CGI-48 (Fragment), full insert sequence Length = 1845 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgc 44 ||||||||||||||| |||||| |||| Sbjct: 238 ctcctcctcctctgccgccgccgccgc 212
>dbj|AK167248.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0045L22 product:similar to WD-repeat protein CGI-48 [Homo sapiens], full insert sequence Length = 2810 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgc 44 ||||||||||||||| |||||| |||| Sbjct: 297 ctcctcctcctctgccgccgccgccgc 271
>emb|BX247866.12| Zebrafish DNA sequence from clone DKEY-216J12 in linkage group 1, complete sequence Length = 197473 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 6 taccctttcccactcctcctcct 28 |||||||| |||||||||||||| Sbjct: 169783 tacccttttccactcctcctcct 169805
>dbj|AK032265.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430513M13 product:weakly similar to HYPOTHETICAL WD-REPEAT PROTEIN CGI-48 [Homo sapiens], full insert sequence Length = 3110 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgc 44 ||||||||||||||| |||||| |||| Sbjct: 242 ctcctcctcctctgccgccgccgccgc 216
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 6.6 Identities = 32/35 (91%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 36 cgcctccgccatgtcgtcgtcgttcgcgcaccacc 70 ||||||||||||| ||||||||||| |||||||| Sbjct: 5232857 cgcctccgccatgatgtcgtcgttcg-gcaccacc 5232890
>gb|AC137894.5| Homo sapiens chromosome 11, clone RP13-46H24, complete sequence Length = 165000 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagcc 36 ||||||||||||||||||| Sbjct: 162323 ctcctcctcctctgcagcc 162305
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 ccctttcccactcctcctcctct 30 ||||||||| ||||||||||||| Sbjct: 10209920 ccctttccctctcctcctcctct 10209898 Score = 38.2 bits (19), Expect = 6.6 Identities = 28/31 (90%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgccatg 48 |||||||||||| || |||||| |||||||| Sbjct: 2658824 ctcctcctcctccgccgccgcccccgccatg 2658794
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 6.6 Identities = 28/31 (90%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgccatg 48 |||||||||| ||||||||||| || ||||| Sbjct: 15814136 ctcctcctccgctgcagccgccgccaccatg 15814106
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 ctccgccatgtcgtcgtcg 57 ||||||||||||||||||| Sbjct: 22135358 ctccgccatgtcgtcgtcg 22135340
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 31 gcagccgcctccgccatgtcgtcgtcg 57 ||||||| |||| |||||||||||||| Sbjct: 30958642 gcagccgtctcctccatgtcgtcgtcg 30958616
>gb|AC138374.2| Homo sapiens chromosome 11, clone CTD-2647G13, complete sequence Length = 196424 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagcc 36 ||||||||||||||||||| Sbjct: 56566 ctcctcctcctctgcagcc 56548
>gb|AC048337.28| Homo sapiens 12 BAC RP11-711D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107515 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 accacggctccctgcaggc 86 ||||||||||||||||||| Sbjct: 99499 accacggctccctgcaggc 99481
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 31 gcagccgcctccgccatgtcgtcgtcg 57 ||||||| |||| |||||||||||||| Sbjct: 15621 gcagccgtctcctccatgtcgtcgtcg 15595
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 31 gcagccgcctccgccatgtcgtcgtcg 57 ||||||| |||| |||||||||||||| Sbjct: 159009 gcagccgtctcctccatgtcgtcgtcg 158983
>gb|AC092037.2| Homo sapiens chromosome 3 clone RP11-89F17, complete sequence Length = 168499 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||||| ||||||||||||| Sbjct: 13612 ctcctctgccgccgcctccgcca 13634
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 38.2 bits (19), Expect = 6.6 Identities = 28/31 (90%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgccatg 48 |||||||||| ||||||||||| || ||||| Sbjct: 99322 ctcctcctccgctgcagccgccgccaccatg 99292
>dbj|AP005125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0058I18 Length = 151453 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 ctccgccatgtcgtcgtcg 57 ||||||||||||||||||| Sbjct: 89014 ctccgccatgtcgtcgtcg 88996
>dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0683E12 Length = 165766 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 ccgccatgtcgtcgtcgtt 59 ||||||||||||||||||| Sbjct: 86 ccgccatgtcgtcgtcgtt 104
>dbj|AP004621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689D06 Length = 146551 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 ccgccatgtcgtcgtcgtt 59 ||||||||||||||||||| Sbjct: 8748 ccgccatgtcgtcgtcgtt 8766
>emb|AJ337788.1|HSA337788 Homo sapiens genomic sequence surrounding NotI site, clone NL1-FL14C Length = 676 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||||| ||||||||||||| Sbjct: 67 ctcctctgccgccgcctccgcca 45
>emb|AJ338072.1|HSA338072 Homo sapiens genomic sequence surrounding NotI site, clone NL1-BJ9R Length = 657 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||||| ||||||||||||| Sbjct: 67 ctcctctgccgccgcctccgcca 45
>emb|AJ338816.1|HSA338816 Homo sapiens genomic sequence surrounding NotI site, clone NL6-GC13C Length = 661 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||||| ||||||||||||| Sbjct: 67 ctcctctgccgccgcctccgcca 45
>emb|AJ335249.1|HSA335249 Homo sapiens genomic sequence surrounding NotI site, clone NR1-CC6C Length = 576 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||||| ||||||||||||| Sbjct: 67 ctcctctgccgccgcctccgcca 45
>emb|AJ326041.1|HSA326041 Homo sapiens genomic sequence surrounding NotI site, clone NL1-DK11C Length = 612 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||| ||||||||||||||| Sbjct: 67 ctcctctccagccgcctccgcca 45
>emb|AJ328327.1|HSA328327 Homo sapiens genomic sequence surrounding NotI site, clone NL4-CE12R Length = 745 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||||| ||||||||||||| Sbjct: 67 ctcctctgccgccgcctccgcca 45
>gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complete sequence Length = 236382 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 accctttcccactcctcct 25 ||||||||||||||||||| Sbjct: 34223 accctttcccactcctcct 34241
>emb|AL136501.4|CNS01DW8 Human chromosome 14 DNA sequence BAC R-804L24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180583 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 tcccactcctcctcctctg 31 ||||||||||||||||||| Sbjct: 133042 tcccactcctcctcctctg 133024
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 ccctttcccactcctcctc 26 ||||||||||||||||||| Sbjct: 1739950 ccctttcccactcctcctc 1739968
>gb|AC155729.3| Mus musculus 6 BAC RP24-173B18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198782 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 ccctttcccactcctcctcctct 30 |||||||||||||| |||||||| Sbjct: 186195 ccctttcccactccccctcctct 186173
>gb|AC174764.1| Gasterosteus aculeatus clone VMRC28-119C14, complete sequence Length = 127803 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 16 cactcctcctcctctgcagccgc 38 ||||||||||||||||| ||||| Sbjct: 77859 cactcctcctcctctgctgccgc 77837
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 ccctttcccactcctcctcctct 30 ||||||||| ||||||||||||| Sbjct: 10209802 ccctttccctctcctcctcctct 10209780 Score = 38.2 bits (19), Expect = 6.6 Identities = 28/31 (90%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgccatg 48 |||||||||||| || |||||| |||||||| Sbjct: 2658768 ctcctcctcctccgccgccgcccccgccatg 2658738
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 38.2 bits (19), Expect = 6.6 Identities = 28/31 (90%) Strand = Plus / Plus Query: 18 ctcctcctcctctgcagccgcctccgccatg 48 |||||||||||| || |||||| |||||||| Sbjct: 9185 ctcctcctcctccgccgccgcccccgccatg 9215
>emb|AL732643.6|CNS08C9I Oryza sativa chromosome 12, . BAC OSJNBa0094N04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 92382 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 ccctttcccactcctcctcctct 30 ||||||||| ||||||||||||| Sbjct: 74122 ccctttccctctcctcctcctct 74100
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 38.2 bits (19), Expect = 6.6 Identities = 28/31 (90%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgccatg 48 |||||||||||| || |||||| |||||||| Sbjct: 27750 ctcctcctcctccgccgccgcccccgccatg 27720
>gb|AC140491.4| Mus musculus BAC clone RP24-136G21 from 9, complete sequence Length = 163404 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 ccctttcccactcctcctcctct 30 ||||||||| ||||||||||||| Sbjct: 127055 ccctttccctctcctcctcctct 127077
>emb|AL844576.9| Mouse DNA sequence from clone RP23-233M15 on chromosome 2, complete sequence Length = 114285 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 ttcccactcctcctcctct 30 ||||||||||||||||||| Sbjct: 72866 ttcccactcctcctcctct 72848
>ref|NM_001037289.1| Pan troglodytes xylosyltransferase 1 (XYLT1), mRNA Length = 2838 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 19 tcctcctcctctgcagccgcctccgcc 45 ||||||||||| ||||||||| ||||| Sbjct: 267 tcctcctcctccgcagccgccgccgcc 241
>emb|AL928804.5| Mouse DNA sequence from clone RP23-87G8 on chromosome 2, complete sequence Length = 127800 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 ccctttcccactcctcctcctct 30 ||||||||| ||||||||||||| Sbjct: 43262 ccctttccccctcctcctcctct 43284
>gb|L13434.1|HUMAGCGB Human chromosome 3p21.1 gene sequence, complete cds Length = 2893 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||||| ||||||||||||| Sbjct: 197 ctcctctgccgccgcctccgcca 175
>emb|X95833.1|HSNOTI6 H.sapiens DNA sequence surrounding NotI site, clone NRLA097R Length = 342 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 ctcctctgcagccgcctccgcca 46 ||||||||| ||||||||||||| Sbjct: 67 ctcctctgccgccgcctccgcca 45
>emb|AL929080.7| Mouse DNA sequence from clone RP24-129J15 on chromosome 2, complete sequence Length = 55858 Score = 38.2 bits (19), Expect = 6.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 ccctttcccactcctcctcctct 30 ||||||||| ||||||||||||| Sbjct: 12825 ccctttccccctcctcctcctct 12847
>dbj|AB024006.1| Hordeum vulgare naat-B and naat-A genes for nicotianamine aminotransferase, complete cds Length = 10966 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgc 44 ||||||||||||||| |||||| |||| Sbjct: 1033 ctcctcctcctctgccgccgccgccgc 1007
>dbj|AB005788.1| Hordeum vulgare mRNA for nicotianamine aminotransferase B, complete cds Length = 1895 Score = 38.2 bits (19), Expect = 6.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 18 ctcctcctcctctgcagccgcctccgc 44 ||||||||||||||| |||||| |||| Sbjct: 459 ctcctcctcctctgccgccgccgccgc 433 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,846,872 Number of Sequences: 3902068 Number of extensions: 1846872 Number of successful extensions: 166440 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 164907 Number of HSP's gapped (non-prelim): 1535 length of query: 139 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 118 effective length of database: 17,151,101,840 effective search space: 2023830017120 effective search space used: 2023830017120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
