ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet57c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 7e-37
2dbj|AK098990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 7e-37
3dbj|AK065313.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 7e-37
4gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome... 105 4e-20
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 105 4e-20
6gb|AY112340.1| Zea mays CL23674_1 mRNA sequence 86 3e-14
7gb|AE006025.1| Caulobacter crescentus CB15 section 351 of 359 of... 44 0.11
8gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 0.44
9emb|Z81324.1|SCCCARBLP S.clavuligerus ccaR and blp genes and ope... 40 1.7
10gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 1.7
11dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 1.7
12gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 1.7
13gb|AF073897.1|SCCCAGC4 Streptomyces clavuligerus carbamoyl trans... 40 1.7
14gb|DQ215259.1| Taeniopygia guttata clone 0058P0049G08 U11/U12 sn... 38 6.9
15gb|DQ215258.1| Taeniopygia guttata clone 0058P0013C01 U11/U12 sn... 38 6.9
16gb|DQ215257.1| Taeniopygia guttata clone 0058P0006F01 U11/U12 sn... 38 6.9
17gb|DQ215256.1| Taeniopygia guttata clone 0058P0053G09 U11/U12 sn... 38 6.9
18gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 38 6.9
19ref|NM_193158.1| Oryza sativa (japonica cultivar-group), predic... 38 6.9
20gb|AY658633.1| Synthetic construct Peudomonas aeruginosa clone F... 38 6.9
21gb|AC132462.4| Mus musculus BAC clone RP23-35F22 from chromosome... 38 6.9
22gb|AF391996.1| Uncultured thermal soil archaeon clone YNPFFA52 1... 38 6.9
23gb|AF391995.1| Uncultured thermal soil archaeon clone YNPFFA30 1... 38 6.9
24gb|AF391994.1| Uncultured thermal soil archaeon clone YNPFFA2 16... 38 6.9
25gb|U63360.1|UCU63360 Uncultured crenarchaeote clone pSL91 16S ri... 38 6.9
26gb|U63362.1|UCU63362 Uncultured crenarchaeote clone pSL14 16S ri... 38 6.9
27gb|L25302.1|CNBRG16SC Crenarchaeotal sp. clone pJP 74 16S riboso... 38 6.9
28gb|L25307.1|CNBRG16SH Crenarchaeotal sp. clone pJP 7 16S ribosom... 38 6.9
29ref|XM_909704.2| PREDICTED: Mus musculus RIKEN cDNA 1700012H05 g... 38 6.9
30gb|AY527412.1| Homo sapiens RAD52 homolog (S. cerevisiae) (RAD52... 38 6.9
31gb|AY672486.1| Uncultured archaeon clone CH8_14a_ARC_16SrRNA_9N_... 38 6.9
32emb|CR689568.2|CNS0FV0S Tetraodon nigroviridis full-length cDNA 38 6.9
33gb|AY350589.1| Crenarchaeote 768-28 16S ribosomal RNA gene, part... 38 6.9
34emb|AL513546.20| Human DNA sequence from clone RP11-144B19 on ch... 38 6.9
35emb|AL357060.31| Human DNA sequence from clone RP11-356I2 on chr... 38 6.9
36gb|DQ441523.1| Uncultured archaeon clone Hverd124N 16S ribosomal... 38 6.9
37gb|DQ441521.1| Uncultured archaeon clone Hverd108N 16S ribosomal... 38 6.9
38gb|DQ441520.1| Uncultured archaeon clone Hverd104N 16S ribosomal... 38 6.9
39gb|DQ441513.1| Uncultured archaeon clone Hverd034N 16S ribosomal... 38 6.9
40gb|DQ441510.1| Uncultured archaeon clone Hverd025N 16S ribosomal... 38 6.9
41gb|DQ441507.1| Uncultured archaeon clone Hverd018N 16S ribosomal... 38 6.9
42gb|DQ441503.1| Uncultured archaeon clone Hverd002N 16S ribosomal... 38 6.9
43emb|X14835.1|TPRRNA16 Thermofilum pendens DNA for 16S and 23S ri... 38 6.9
44emb|CR555306.1| Azoarcus sp. EbN1 complete genome 38 6.9
45dbj|AK061861.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 6.9
46emb|AJ621746.1| Gallus gallus partial P4HA2 gene exons 1-14 and ... 38 6.9
47emb|X99557.1|TLRRNA16S T.librum 16S rRNA gene 38 6.9
48emb|X99556.1|TARRNA16S T.aggregans 16S rRNA gene 38 6.9
49gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 38 6.9
50gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 38 6.9
51gb|DQ417469.1| Uncultured crenarchaeote clone a87R27 16S ribosom... 38 6.9
52ref|NM_029660.1| Mus musculus RIKEN cDNA 1700012H05 gene (170001... 38 6.9
53gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 38 6.9
54gb|AF255605.1| Thermofiliaceae str. SRI-370 16S ribosomal RNA ge... 38 6.9
55gb|DQ074974.1| Cordyceps bassiana strain 101M5 transposon hupfer... 38 6.9
56gb|AY702971.1| Desulfovibrio gigas putative tRNA delta (2)-isope... 38 6.9
57dbj|AK005907.1| Mus musculus adult male testis cDNA, RIKEN full-... 38 6.9
58gb|AY882767.2| Uncultured archaeon clone SK213 16S ribosomal RNA... 38 6.9
59gb|AY882728.2| Uncultured archaeon clone SK173 16S ribosomal RNA... 38 6.9
60dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
61dbj|AB063646.1| Vulcanisaeta souniana gene for 16S rRNA, partia... 38 6.9
62dbj|AB063645.1| Vulcanisaeta souniana gene for 16S rRNA, partia... 38 6.9
63dbj|AB063644.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
64dbj|AB063643.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
65dbj|AB063642.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
66dbj|AB063641.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
67dbj|AB063640.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
68dbj|AB063639.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
69dbj|AB063638.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
70dbj|AB063637.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
71dbj|AB063636.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
72dbj|AB063635.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
73dbj|AB063634.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
74dbj|AB063633.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
75dbj|AB063632.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
76dbj|AB063631.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
77dbj|AB063630.1| Vulcanisaeta distributa gene for 16S rRNA, part... 38 6.9
78dbj|AB013926.1| Caldivirga maquilingensis gene for 16S rRNA, par... 38 6.9
79gb|AC004803.11| Homo sapiens 12 BAC RP11-359B12 (Roswell Park Ca... 38 6.9
80gb|AE004580.1| Pseudomonas aeruginosa PAO1, section 141 of 529 o... 38 6.9
81dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
82dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
83dbj|AB121085.1| Propionibacterium freudenreichii hemR gene, prom... 38 6.9
84dbj|AB121084.1| Propionibacterium freudenreichii hemX gene, prom... 38 6.9
85dbj|AK099005.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 6.9
86gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 38 6.9
87gb|U51164.1|PFU51164 Propionibacterium freudenreichii ferrochela... 38 6.9
88dbj|AB257407.1| Uncultured archaeon gene for 16S rRNA, partial s... 38 6.9
89dbj|AB257406.1| Uncultured archaeon gene for 16S rRNA, partial s... 38 6.9
90gb|DQ243775.1| Uncultured Desulfurococcales archaeon clone YNP_S... 38 6.9
91gb|DQ243774.1| Uncultured Thermoproteales archaeon clone YNP_SSp... 38 6.9
92gb|DQ243754.1| Uncultured Desulfurococcales archaeon clone YNP_O... 38 6.9
93gb|DQ243731.1| Uncultured Desulfurococcales archaeon clone YNP_B... 38 6.9
94gb|DQ243727.1| Uncultured Thermoproteales archaeon clone YNP_BP_... 38 6.9
95gb|DQ228598.1| Uncultured archaeon clone CH2a36 16S ribosomal RN... 38 6.9
96dbj|D85417.1| Propionibacterium freudenreichii hemY, hemH, hemB,... 38 6.9
97emb|AL845552.2|CNS08CBB Human chromosome 14 DNA sequence BAC C-2... 38 6.9 
>dbj|AK104689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-F09, full
           insert sequence
          Length = 1415

 Score =  161 bits (81), Expect = 7e-37
 Identities = 114/125 (91%)
 Strand = Plus / Plus

                                                                       
Query: 17  ggcggccgcggccccgctttcacggcccccacccggccgcgcaccggcaaggccgccctc 76
           ||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||| 
Sbjct: 353 ggcggacgcggccccgcgttcacgccccccacccgcccgcgcaccggcaaggccgccctt 412

                                                                       
Query: 77  ccgcttaagcgcgaccgtacgaggtctaagagatacctcgagatacagaagctgagggag 136
           ||||| ||||||||||| |||||||| ||| ||| ||| |||||||||||||||||||||
Sbjct: 413 ccgctcaagcgcgaccgcacgaggtcgaagcgattcctggagatacagaagctgagggag 472

                
Query: 137 agcaa 141
           |||||
Sbjct: 473 agcaa 477
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>dbj|AK098990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L23, full
           insert sequence
          Length = 1429

 Score =  161 bits (81), Expect = 7e-37
 Identities = 114/125 (91%)
 Strand = Plus / Plus

                                                                       
Query: 17  ggcggccgcggccccgctttcacggcccccacccggccgcgcaccggcaaggccgccctc 76
           ||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||| 
Sbjct: 348 ggcggacgcggccccgcgttcacgccccccacccgcccgcgcaccggcaaggccgccctt 407

                                                                       
Query: 77  ccgcttaagcgcgaccgtacgaggtctaagagatacctcgagatacagaagctgagggag 136
           ||||| ||||||||||| |||||||| ||| ||| ||| |||||||||||||||||||||
Sbjct: 408 ccgctcaagcgcgaccgcacgaggtcgaagcgattcctggagatacagaagctgagggag 467

                
Query: 137 agcaa 141
           |||||
Sbjct: 468 agcaa 472
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>dbj|AK065313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002O22, full
           insert sequence
          Length = 1455

 Score =  161 bits (81), Expect = 7e-37
 Identities = 114/125 (91%)
 Strand = Plus / Plus

                                                                       
Query: 17  ggcggccgcggccccgctttcacggcccccacccggccgcgcaccggcaaggccgccctc 76
           ||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||| 
Sbjct: 357 ggcggacgcggccccgcgttcacgccccccacccgcccgcgcaccggcaaggccgccctt 416

                                                                       
Query: 77  ccgcttaagcgcgaccgtacgaggtctaagagatacctcgagatacagaagctgagggag 136
           ||||| ||||||||||| |||||||| ||| ||| ||| |||||||||||||||||||||
Sbjct: 417 ccgctcaagcgcgaccgcacgaggtcgaagcgattcctggagatacagaagctgagggag 476

                
Query: 137 agcaa 141
           |||||
Sbjct: 477 agcaa 481
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>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05,
              complete sequence
          Length = 178013

 Score =  105 bits (53), Expect = 4e-20
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                          
Query: 17     ggcggccgcggccccgctttcacggcccccacccggccgcgcaccggcaaggccgccctc 76
              ||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||| 
Sbjct: 118865 ggcggacgcggccccgcgttcacgccccccacccgcccgcgcaccggcaaggccgccctt 118924

                               
Query: 77     ccgcttaagcgcgaccg 93
              ||||| |||||||||||
Sbjct: 118925 ccgctcaagcgcgaccg 118941



 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                             
Query: 95     acgaggtctaagagatacctcgagatacagaagctgagggagagcaa 141
              |||||||| ||| ||| ||| ||||||||||||||||||||||||||
Sbjct: 119049 acgaggtcgaagcgattcctggagatacagaagctgagggagagcaa 119095
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  105 bits (53), Expect = 4e-20
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                            
Query: 17       ggcggccgcggccccgctttcacggcccccacccggccgcgcaccggcaaggccgccctc 76
                ||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||| 
Sbjct: 18645750 ggcggacgcggccccgcgttcacgccccccacccgcccgcgcaccggcaaggccgccctt 18645809

                                 
Query: 77       ccgcttaagcgcgaccg 93
                ||||| |||||||||||
Sbjct: 18645810 ccgctcaagcgcgaccg 18645826



 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 95       acgaggtctaagagatacctcgagatacagaagctgagggagagcaa 141
                |||||||| ||| ||| ||| ||||||||||||||||||||||||||
Sbjct: 18645934 acgaggtcgaagcgattcctggagatacagaagctgagggagagcaa 18645980
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>gb|AY112340.1| Zea mays CL23674_1 mRNA sequence
          Length = 1344

 Score = 85.7 bits (43), Expect = 3e-14
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                        
Query: 79   gcttaagcgcgaccgtacgaggtctaagagatacctcgagatacagaagctgagggagag 138
            ||||||||||||||| |||||||| ||||| | ||||||||||||||||||| |||||||
Sbjct: 1001 gcttaagcgcgaccgcacgaggtcgaagaggttcctcgagatacagaagctgcgggagag 942

               
Query: 139  caa 141
            |||
Sbjct: 941  caa 939
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>gb|AE006025.1| Caulobacter crescentus CB15 section 351 of 359 of the complete genome
          Length = 10596

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 53    ccgcgcaccggcaaggccgccc 74
             ||||||||||||||||||||||
Sbjct: 10064 ccgcgcaccggcaaggccgccc 10085
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 45      ccacccggccgcgcaccggca 65
               |||||||||||||||||||||
Sbjct: 3713073 ccacccggccgcgcaccggca 3713053
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>emb|Z81324.1|SCCCARBLP S.clavuligerus ccaR and blp genes and open open reading frame
          Length = 3694

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 4    cgaggacggctacggcggccgcgg 27
            ||||||||||| ||||||||||||
Sbjct: 2826 cgaggacggctccggcggccgcgg 2803
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     gcgcaccggcaaggccgccc 74
              ||||||||||||||||||||
Sbjct: 340140 gcgcaccggcaaggccgccc 340159
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 9       acggctacggcggccgcggc 28
               ||||||||||||||||||||
Sbjct: 2642008 acggctacggcggccgcggc 2641989



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 46      cacccggccgcgcaccggc 64
               |||||||||||||||||||
Sbjct: 7838891 cacccggccgcgcaccggc 7838909



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 16      cggcggccgcggccccgct 34
               |||||||||||||||||||
Sbjct: 7731209 cggcggccgcggccccgct 7731191



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 15      acggcggccgcggccccgc 33
               |||||||||||||||||||
Sbjct: 3381878 acggcggccgcggccccgc 3381860
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 15      acggcggccgcggccccgct 34
               ||||||||||||||||||||
Sbjct: 1289341 acggcggccgcggccccgct 1289322
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>gb|AF073897.1|SCCCAGC4 Streptomyces clavuligerus carbamoyl transferase CmcH (cmcH), positive
            regulator CcaR (ccaR), unknown protein, and Blp (blp)
            genes, complete cds
          Length = 5971

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 4    cgaggacggctacggcggccgcgg 27
            ||||||||||| ||||||||||||
Sbjct: 5099 cgaggacggctccggcggccgcgg 5076
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>gb|DQ215259.1| Taeniopygia guttata clone 0058P0049G08 U11/U12 snRNP 35K variant
          1-like mRNA, complete sequence
          Length = 1153

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 16 cggcggccgcggccccgct 34
          |||||||||||||||||||
Sbjct: 73 cggcggccgcggccccgct 91
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>gb|DQ215258.1| Taeniopygia guttata clone 0058P0013C01 U11/U12 snRNP 35K variant
          1-like mRNA, complete sequence
          Length = 1153

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 16 cggcggccgcggccccgct 34
          |||||||||||||||||||
Sbjct: 58 cggcggccgcggccccgct 76
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>gb|DQ215257.1| Taeniopygia guttata clone 0058P0006F01 U11/U12 snRNP 35K variant
          1-like mRNA, complete sequence
          Length = 1153

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 16 cggcggccgcggccccgct 34
          |||||||||||||||||||
Sbjct: 61 cggcggccgcggccccgct 79
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>gb|DQ215256.1| Taeniopygia guttata clone 0058P0053G09 U11/U12 snRNP 35K variant
          1-like mRNA, complete sequence
          Length = 1153

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 16 cggcggccgcggccccgct 34
          |||||||||||||||||||
Sbjct: 73 cggcggccgcggccccgct 91
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 41      gcccccacccggccgcgca 59
               |||||||||||||||||||
Sbjct: 1555123 gcccccacccggccgcgca 1555105
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>ref|NM_193158.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1350

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 11  ggctacggcggccgcggcc 29
           |||||||||||||||||||
Sbjct: 180 ggctacggcggccgcggcc 198
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>gb|AY658633.1| Synthetic construct Peudomonas aeruginosa clone FLH033968.01F
          PA1520 gene, partial cds
          Length = 780

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 52 gccgcgcaccggcaaggccgccc 74
          |||||||||||||||||| ||||
Sbjct: 33 gccgcgcaccggcaaggctgccc 55
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>gb|AC132462.4| Mus musculus BAC clone RP23-35F22 from chromosome 7, complete sequence
          Length = 194641

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     gacggctacggcggccgcg 26
             |||||||||||||||||||
Sbjct: 96522 gacggctacggcggccgcg 96504
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>gb|AF391996.1| Uncultured thermal soil archaeon clone YNPFFA52 16S ribosomal RNA
            gene, partial sequence
          Length = 1384

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 29   cccgctttcacggcccccacccg 51
            ||||||||||||||||| |||||
Sbjct: 1138 cccgctttcacggcccctacccg 1160
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>gb|AF391995.1| Uncultured thermal soil archaeon clone YNPFFA30 16S ribosomal RNA
            gene, partial sequence
          Length = 1408

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 29   cccgctttcacggcccccacccg 51
            ||||||||||||||||| |||||
Sbjct: 1116 cccgctttcacggcccctacccg 1138
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>gb|AF391994.1| Uncultured thermal soil archaeon clone YNPFFA2 16S ribosomal RNA
            gene, partial sequence
          Length = 1402

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 29   cccgctttcacggcccccacccg 51
            ||||||||||||||||| |||||
Sbjct: 1138 cccgctttcacggcccctacccg 1160
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>gb|U63360.1|UCU63360 Uncultured crenarchaeote clone pSL91 16S ribosomal RNA gene,
           partial sequence
          Length = 448

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 292 cccgctctcacggcccccacccg 270
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>gb|U63362.1|UCU63362 Uncultured crenarchaeote clone pSL14 16S ribosomal RNA gene,
           partial sequence
          Length = 445

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 294 cccgctctcacggcccccacccg 272
to top
>gb|L25302.1|CNBRG16SC Crenarchaeotal sp. clone pJP 74 16S ribosomal RNA gene fragment
          Length = 444

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 294 cccgctctcacggcccccacccg 272
to top
>gb|L25307.1|CNBRG16SH Crenarchaeotal sp. clone pJP 7 16S ribosomal RNA gene fragment
          Length = 448

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 292 cccgctctcacggcccccacccg 270
to top
>ref|XM_909704.2| PREDICTED: Mus musculus RIKEN cDNA 1700012H05 gene (1700012H05Rik),
           mRNA
          Length = 1612

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   gacggctacggcggccgcg 26
           |||||||||||||||||||
Sbjct: 977 gacggctacggcggccgcg 995
to top
>gb|AY527412.1| Homo sapiens RAD52 homolog (S. cerevisiae) (RAD52) gene, complete cds
          Length = 41510

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 116   gagatacagaagctgaggg 134
             |||||||||||||||||||
Sbjct: 14587 gagatacagaagctgaggg 14569
to top
>gb|AY672486.1| Uncultured archaeon clone CH8_14a_ARC_16SrRNA_9N_EPR 16S ribosomal
           RNA gene, partial sequence
          Length = 888

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 305 cccgctctcacggcccccacccg 283
to top
>emb|CR689568.2|CNS0FV0S Tetraodon nigroviridis full-length cDNA
          Length = 839

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 40  ggcccccacccggccgcgc 58
           |||||||||||||||||||
Sbjct: 229 ggcccccacccggccgcgc 247
to top
>gb|AY350589.1| Crenarchaeote 768-28 16S ribosomal RNA gene, partial sequence
          Length = 641

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 271 cccgctctcacggcccccacccg 249
to top
>emb|AL513546.20| Human DNA sequence from clone RP11-144B19 on chromosome 1 Contains part
             of the gene for nuclear pore membrane glycoprotein
             210-like (LOC91181), complete sequence
          Length = 61404

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 119   atacagaagctgagggaga 137
             |||||||||||||||||||
Sbjct: 31094 atacagaagctgagggaga 31112
to top
>emb|AL357060.31| Human DNA sequence from clone RP11-356I2 on chromosome 6 Contains three
             novel genes, the TNFAIP3 gene for tumour necrosis factor
             alpha-induced protein 3 and a CpG island, complete
             sequence
          Length = 182209

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 118   gatacagaagctgagggagagca 140
             ||||||||||||||| |||||||
Sbjct: 10344 gatacagaagctgagagagagca 10322
to top
>gb|DQ441523.1| Uncultured archaeon clone Hverd124N 16S ribosomal RNA gene, partial
           sequence
          Length = 892

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 310 cccgctctcacggcccccacccg 288
to top
>gb|DQ441521.1| Uncultured archaeon clone Hverd108N 16S ribosomal RNA gene, partial
           sequence
          Length = 891

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 308 cccgctctcacggcccccacccg 286
to top
>gb|DQ441520.1| Uncultured archaeon clone Hverd104N 16S ribosomal RNA gene, partial
           sequence
          Length = 891

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 308 cccgctctcacggcccccacccg 286
to top
>gb|DQ441513.1| Uncultured archaeon clone Hverd034N 16S ribosomal RNA gene, partial
           sequence
          Length = 891

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 308 cccgctctcacggcccccacccg 286
to top
>gb|DQ441510.1| Uncultured archaeon clone Hverd025N 16S ribosomal RNA gene, partial
           sequence
          Length = 892

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 310 cccgctctcacggcccccacccg 288
to top
>gb|DQ441507.1| Uncultured archaeon clone Hverd018N 16S ribosomal RNA gene, partial
           sequence
          Length = 892

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 310 cccgctctcacggcccccacccg 288
to top
>gb|DQ441503.1| Uncultured archaeon clone Hverd002N 16S ribosomal RNA gene, partial
           sequence
          Length = 890

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 310 cccgctctcacggcccccacccg 288
to top
>emb|X14835.1|TPRRNA16 Thermofilum pendens DNA for 16S and 23S ribosomal RNA, tRNA-Met, and
            tRNA-Gly
          Length = 8935

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 29   cccgctttcacggcccccacccg 51
            |||||| ||||||||||||||||
Sbjct: 1307 cccgctctcacggcccccacccg 1285
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 10      cggctacggcggccgcggc 28
               |||||||||||||||||||
Sbjct: 1148245 cggctacggcggccgcggc 1148227
to top
>dbj|AK061861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G11, full
           insert sequence
          Length = 1612

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 11  ggctacggcggccgcggcc 29
           |||||||||||||||||||
Sbjct: 271 ggctacggcggccgcggcc 289
to top
>emb|AJ621746.1| Gallus gallus partial P4HA2 gene exons 1-14 and partial RIL gene exons
             1-3, BAC bCHORI92M14 clone, contig 7
          Length = 76796

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 39    cggcccccacccggccgcgcacc 61
             |||||||||||||||| ||||||
Sbjct: 57456 cggcccccacccggccccgcacc 57478
to top
>emb|X99557.1|TLRRNA16S T.librum 16S rRNA gene
          Length = 907

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 291 cccgctctcacggcccccacccg 269
to top
>emb|X99556.1|TARRNA16S T.aggregans 16S rRNA gene
          Length = 1432

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 295 cccgctctcacggcccccacccg 273
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 46      cacccggccgcgcaccggc 64
               |||||||||||||||||||
Sbjct: 2734185 cacccggccgcgcaccggc 2734167
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 123     agaagctgagggagagcaa 141
               |||||||||||||||||||
Sbjct: 1668418 agaagctgagggagagcaa 1668400
to top
>gb|DQ417469.1| Uncultured crenarchaeote clone a87R27 16S ribosomal RNA gene,
           partial sequence
          Length = 1072

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 307 cccgctctcacggcccccacccg 285
to top
>ref|NM_029660.1| Mus musculus RIKEN cDNA 1700012H05 gene (1700012H05Rik), mRNA
          Length = 1473

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   gacggctacggcggccgcg 26
           |||||||||||||||||||
Sbjct: 847 gacggctacggcggccgcg 865
to top
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 46      cacccggccgcgcaccggcaagg 68
               |||| ||||||||||||||||||
Sbjct: 2510379 cacctggccgcgcaccggcaagg 2510401
to top
>gb|AF255605.1| Thermofiliaceae str. SRI-370 16S ribosomal RNA gene, partial
           sequence
          Length = 1354

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 294 cccgctctcacggcccccacccg 272
to top
>gb|DQ074974.1| Cordyceps bassiana strain 101M5 transposon hupfer transposase gene,
           partial cds
          Length = 457

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 10  cggctacggcggccgcggc 28
           |||||||||||||||||||
Sbjct: 124 cggctacggcggccgcggc 106
to top
>gb|AY702971.1| Desulfovibrio gigas putative tRNA delta
           (2)-isopentenylpyrophosphate transferase (miaA),
           putative phosphopantetheine adenylyltransferase (coaD),
           putative N6-adenine-specific methylase, putative
           beta-lactamase fold exonuclease, flavoredoxin (flr),
           hypothetical metal binding protein, putative rRNA
           pseudouridine synthase B, putative outer membrane
           lipoprotein carrier protein (lolA), and putative
           membrane protein (ftsK) genes, complete cds; and
           translation elongation factor P gene, partial cds
          Length = 11000

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  cacggcccccacccggccg 55
           |||||||||||||||||||
Sbjct: 593 cacggcccccacccggccg 575
to top
>dbj|AK005907.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700012H05 product:TESTES SPECIFIC
           HETEROGENOUS NUCLEAR RIBONUCLEOPROTEIN G-T  homolog
           [Homo sapiens], full insert sequence
          Length = 1473

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   gacggctacggcggccgcg 26
           |||||||||||||||||||
Sbjct: 847 gacggctacggcggccgcg 865
to top
>gb|AY882767.2| Uncultured archaeon clone SK213 16S ribosomal RNA gene, partial
           sequence
          Length = 1339

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 290 cccgctctcacggcccccacccg 268
to top
>gb|AY882728.2| Uncultured archaeon clone SK173 16S ribosomal RNA gene, partial
           sequence
          Length = 1338

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 290 cccgctctcacggcccccacccg 268
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 11       ggctacggcggccgcggcc 29
                |||||||||||||||||||
Sbjct: 18964845 ggctacggcggccgcggcc 18964827
to top
>dbj|AB063646.1| Vulcanisaeta souniana  gene for 16S rRNA, partial sequence,
           strain:IC-060
          Length = 609

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 289 cccgctctcacggcccccacccg 267
to top
>dbj|AB063645.1| Vulcanisaeta souniana  gene for 16S rRNA, partial sequence,
           strain:IC-059
          Length = 1477

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 289 cccgctctcacggcccccacccg 267
to top
>dbj|AB063644.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-141
          Length = 569

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 249 cccgctctcacggcccccacccg 227
to top
>dbj|AB063643.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-140
          Length = 597

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 277 cccgctctcacggcccccacccg 255
to top
>dbj|AB063642.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-136
          Length = 605

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 285 cccgctctcacggcccccacccg 263
to top
>dbj|AB063641.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-135
          Length = 1477

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 290 cccgctctcacggcccccacccg 268
to top
>dbj|AB063640.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-124
          Length = 1477

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 290 cccgctctcacggcccccacccg 268
to top
>dbj|AB063639.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-065
          Length = 2167

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 290 cccgctctcacggcccccacccg 268
to top
>dbj|AB063638.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-064
          Length = 587

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 267 cccgctctcacggcccccacccg 245
to top
>dbj|AB063637.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-058
          Length = 595

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 275 cccgctctcacggcccccacccg 253
to top
>dbj|AB063636.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-052
          Length = 586

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 266 cccgctctcacggcccccacccg 244
to top
>dbj|AB063635.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-051
          Length = 585

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 265 cccgctctcacggcccccacccg 243
to top
>dbj|AB063634.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-032
          Length = 602

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 283 cccgctctcacggcccccacccg 261
to top
>dbj|AB063633.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-030
          Length = 589

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 269 cccgctctcacggcccccacccg 247
to top
>dbj|AB063632.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-029
          Length = 591

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 271 cccgctctcacggcccccacccg 249
to top
>dbj|AB063631.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-019
          Length = 589

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 271 cccgctctcacggcccccacccg 249
to top
>dbj|AB063630.1| Vulcanisaeta distributa  gene for 16S rRNA, partial sequence,
           strain:IC-017
          Length = 1476

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 290 cccgctctcacggcccccacccg 268
to top
>dbj|AB013926.1| Caldivirga maquilingensis gene for 16S rRNA, partial sequence
          Length = 1642

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 295 cccgctctcacggcccccacccg 273
to top
>gb|AC004803.11| Homo sapiens 12 BAC RP11-359B12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 154369

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 116   gagatacagaagctgaggg 134
             |||||||||||||||||||
Sbjct: 57937 gagatacagaagctgaggg 57955
to top
>gb|AE004580.1| Pseudomonas aeruginosa PAO1, section 141 of 529 of the complete
            genome
          Length = 15247

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 52   gccgcgcaccggcaaggccgccc 74
            |||||||||||||||||| ||||
Sbjct: 8220 gccgcgcaccggcaaggctgccc 8242
to top
>dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1074C08
          Length = 165701

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 11     ggctacggcggccgcggcc 29
              |||||||||||||||||||
Sbjct: 137235 ggctacggcggccgcggcc 137217
to top
>dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1129H01
          Length = 101104

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    ggctacggcggccgcggcc 29
             |||||||||||||||||||
Sbjct: 21888 ggctacggcggccgcggcc 21870
to top
>dbj|AB121085.1| Propionibacterium freudenreichii hemR gene, promoter region,
           clone:p17R
          Length = 304

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 58  caccggcaaggccgccctc 76
           |||||||||||||||||||
Sbjct: 265 caccggcaaggccgccctc 283
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>dbj|AB121084.1| Propionibacterium freudenreichii hemX gene, promoter region,
          clone:P17
          Length = 304

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 58 caccggcaaggccgccctc 76
          |||||||||||||||||||
Sbjct: 40 caccggcaaggccgccctc 22
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>dbj|AK099005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109B04, full
           insert sequence
          Length = 1570

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 11  ggctacggcggccgcggcc 29
           |||||||||||||||||||
Sbjct: 231 ggctacggcggccgcggcc 249
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 4       cgaggacggctacggcggc 22
               |||||||||||||||||||
Sbjct: 2423394 cgaggacggctacggcggc 2423412
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>gb|U51164.1|PFU51164 Propionibacterium freudenreichii ferrochelatase (hemH),
            aminolevulinic acid dehydratase (hemB), membrane-bound
            transport protein,  and repressor protein genes, complete
            cds
          Length = 3789

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 58   caccggcaaggccgccctc 76
            |||||||||||||||||||
Sbjct: 3161 caccggcaaggccgccctc 3179
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>dbj|AB257407.1| Uncultured archaeon gene for 16S rRNA, partial sequence, clone:
           ARCS-02
          Length = 810

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 220 cccgctctcacggcccccacccg 198
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>dbj|AB257406.1| Uncultured archaeon gene for 16S rRNA, partial sequence, clone:
           ARCS-01
          Length = 810

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 220 cccgctctcacggcccccacccg 198
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>gb|DQ243775.1| Uncultured Desulfurococcales archaeon clone YNP_SSp_A51 16S
           ribosomal RNA gene, partial sequence
          Length = 1306

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 243 cccgctctcacggcccccacccg 221
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>gb|DQ243774.1| Uncultured Thermoproteales archaeon clone YNP_SSp_A50 16S ribosomal
           RNA gene, partial sequence
          Length = 1437

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 321 cccgctctcacggcccccacccg 299
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>gb|DQ243754.1| Uncultured Desulfurococcales archaeon clone YNP_ObP_A25 16S
           ribosomal RNA gene, partial sequence
          Length = 1321

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 235 cccgctctcacggcccccacccg 213
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>gb|DQ243731.1| Uncultured Desulfurococcales archaeon clone YNP_BP_A49 16S
           ribosomal RNA gene, partial sequence
          Length = 1354

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 294 cccgctctcacggcccccacccg 272
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>gb|DQ243727.1| Uncultured Thermoproteales archaeon clone YNP_BP_A17 16S ribosomal
           RNA gene, partial sequence
          Length = 1319

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           |||||| ||||||||||||||||
Sbjct: 245 cccgctctcacggcccccacccg 223
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>gb|DQ228598.1| Uncultured archaeon clone CH2a36 16S ribosomal RNA gene, partial
           sequence
          Length = 1321

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 29  cccgctttcacggcccccacccg 51
           ||||||||||||||||| |||||
Sbjct: 293 cccgctttcacggcccctacccg 271
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>dbj|D85417.1| Propionibacterium freudenreichii hemY, hemH, hemB, hemX, hemR and
            hemL genes, complete cds
          Length = 7984

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 58   caccggcaaggccgccctc 76
            |||||||||||||||||||
Sbjct: 5883 caccggcaaggccgccctc 5901
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>emb|AL845552.2|CNS08CBB Human chromosome 14 DNA sequence BAC C-2062F14 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 130569

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     cggcggccgcggccccgct 34
              |||||||||||||||||||
Sbjct: 115871 cggcggccgcggccccgct 115889


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 791,445
Number of Sequences: 3902068
Number of extensions: 791445
Number of successful extensions: 69045
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67479
Number of HSP's gapped (non-prelim): 1566
length of query: 144
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 123
effective length of database: 17,151,101,840
effective search space: 2109585526320
effective search space used: 2109585526320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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