ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet57a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C79B1_SINAL (O81345) Cytochrome P450 79B1 (EC 1.14.-.-) 42 3e-04
2C86A1_ARATH (P48422) Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXX... 40 0.002
3C79B2_ARATH (O81346) Cytochrome P450 79B2 (EC 1.14.-.-) 39 0.003
4C86A2_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-) 33 0.14
5C28D2_DROME (Q9VMT6) Probable cytochrome P450 28d2 (EC 1.14.-.-)... 30 2.0
6STAN_DROME (Q9V5N8) Protocadherin-like wing polarity protein sta... 30 2.0
7DXR_CLOPE (Q8XJR1) 1-deoxy-D-xylulose 5-phosphate reductoisomera... 29 3.5
8PPNK_BLOFL (Q7VRQ5) Probable inorganic polyphosphate/ATP-NAD kin... 29 3.5
9YN8N_YEAST (P53735) Hypothetical 67.5 kDa protein in DBP6-COQ2 i... 28 4.5
10C82A2_SOYBN (O81972) Cytochrome P450 82A2 (EC 1.14.-.-) (P450 CP4) 28 4.5
11IRX5_HUMAN (P78411) Iroquois-class homeodomain protein IRX-5 (Ir... 28 5.9
12PIP1_YEAST (P40020) Polymerase-interacting protein 1 (Factor int... 28 7.7

>C79B1_SINAL (O81345) Cytochrome P450 79B1 (EC 1.14.-.-)|
          Length = 542

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
 Frame = +1

Query: 40  TTMSTMSFSQELLISTL----AIILVFMYTLYLRSSRSKGPAVLP---TNWPIVGVLPSL 198
           TT  T+SFS   L++TL    AI LV +    L +  +K    LP   T WPI+G++P++
Sbjct: 14  TTKQTLSFSNMYLLTTLQAFVAITLVMLLKKVLVNDTNKKKLSLPPGPTGWPIIGMVPTM 73

Query: 199 VAN------LHN----LHDYLAVVLAGSGHNFRATGPAGDRDAV 300
           + +      LH+    L+  +A V  GS H    T P   R+ +
Sbjct: 74  LKSRPVFRWLHSIMKQLNTEIACVRLGSTHVITVTCPKIAREVL 117



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>C86A1_ARATH (P48422) Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI)|
           (P450-dependent fatty acid omega-hydroxylase)
          Length = 513

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 25/63 (39%), Positives = 32/63 (50%)
 Frame = +1

Query: 88  LAIILVFMYTLYLRSSRSKGPAVLPTNWPIVGVLPSLVANLHNLHDYLAVVLAGSGHNFR 267
           +A + V+    Y  S R  GP VLP     VG LP L+AN   +HD++A        N R
Sbjct: 13  VAALSVYALWFYFLSRRLTGPKVLP----FVGSLPYLIANRSRIHDWIA-------DNLR 61

Query: 268 ATG 276
           ATG
Sbjct: 62  ATG 64



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>C79B2_ARATH (O81346) Cytochrome P450 79B2 (EC 1.14.-.-)|
          Length = 541

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
 Frame = +1

Query: 40  TTMSTMSFSQELLISTL----AIILVFMYTLYLRSSRSKGPAVLP--TNWPIVGVLPSLV 201
           T   T SFS   L+STL    AI LV +    +     K P + P  T WPI+G++P+++
Sbjct: 14  TATETSSFSTLYLLSTLQAFVAITLVMLLKKLMTDPNKKKPYLPPGPTGWPIIGMIPTML 73

Query: 202 AN------LHN----LHDYLAVVLAGSGHNFRATGP 279
            +      LH+    L+  +A V  G+ H    T P
Sbjct: 74  KSRPVFRWLHSIMKQLNTEIACVKLGNTHVITVTCP 109



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>C86A2_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-)|
          Length = 553

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +1

Query: 88  LAIILVFMYTLYLR--SSRSKGPAVLPTNWPIVGVLPSLVANLHNLHDYLAVVLAGSGHN 261
           L + +V  Y L+ +  S   KGP V    WP++G LP L+     +HD++   L   G  
Sbjct: 8   LLVAVVAAYWLWFQRISRWLKGPRV----WPVLGSLPGLIEQRDRMHDWITENLRACGGT 63

Query: 262 FR 267
           ++
Sbjct: 64  YQ 65



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>C28D2_DROME (Q9VMT6) Probable cytochrome P450 28d2 (EC 1.14.-.-) (CYPXXVIIID2)|
          Length = 501

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 73  LLISTLAIILVFMYTLYLRSSRSKGPAVLPTNWPIVGVLPSLVANLHNL 219
           +L+ TL +++    T      R +G    PT WP VG  PS+     N+
Sbjct: 9   VLVLTLLVLVYVFLTWNFNYWRKRGIKTAPT-WPFVGSFPSIFTRKRNI 56



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>STAN_DROME (Q9V5N8) Protocadherin-like wing polarity protein stan precursor|
            (Protein starry night) (Protein flamingo)
          Length = 3574

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
 Frame = -2

Query: 290  RSPAGPVALKLCPDPARTTAR*SCKLWRLATREGSTPTIGQFVGSTAGPF---------- 141
            R+P G VA++ CP PAR   + SC +     + GS  T   +   T+ PF          
Sbjct: 2159 RTPLGGVAIEGCPPPARGKGQRSCDV-----QSGSWNTPDMY-NCTSEPFVELRRQLSQL 2212

Query: 140  DLLDLRYNVYMKTRMMASVEMSSSCE 63
            + L+L  N ++  +M  + ++  +CE
Sbjct: 2213 EKLELELNSFVAIKM--AEQLRKACE 2236



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>DXR_CLOPE (Q8XJR1) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 384

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 100 LVFMYTLYLRSSRSKGPAVLPTNWPIVGVLPSLVANLHNLHDYLAVVLAGSGHNFR 267
           LV    L +R ++  G  +LP +     +  SL  N HN  D   ++L  SG  FR
Sbjct: 128 LVVAGELVMREAKENGVKILPVDSEHSAIFQSLQGNAHNKID--KILLTASGGPFR 181



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>PPNK_BLOFL (Q7VRQ5) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 293

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +1

Query: 193 SLVANLHNLHDY--LAVVLAGSGHNFRATGPAGDRD 294
           +++ NLH++ DY  LA+V+ G G+  RA       D
Sbjct: 53  AIIGNLHDIGDYADLAIVIGGDGNMLRAANVLSQYD 88



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>YN8N_YEAST (P53735) Hypothetical 67.5 kDa protein in DBP6-COQ2 intergenic|
           region
          Length = 605

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +1

Query: 73  LLISTLAIILVFMYTLYLRSSRSKGPAVLPTNWPIVGVLPSLVANLHNLHDYLAVVLAGS 252
           L++STL++   F    Y  + ++K P +  T    + + P L+  L ++ DYLA ++  S
Sbjct: 376 LVLSTLSLYKTFYANKY-SNLKTKNPIITITYTAYLFIYPLLLDLLSSISDYLATLVISS 434



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>C82A2_SOYBN (O81972) Cytochrome P450 82A2 (EC 1.14.-.-) (P450 CP4)|
          Length = 522

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +1

Query: 94  IILVFMYTLYLRS----SRSKGPAVLPTNWPIVGVLPSLVAN 207
           + L+ +  L+LR     S  +GP  +   WPI+G LP L+ +
Sbjct: 15  VSLILLLYLFLRGGSWKSGEEGPPTVAGAWPIIGHLPLLLGS 56



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>IRX5_HUMAN (P78411) Iroquois-class homeodomain protein IRX-5 (Iroquois|
           homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A)
          Length = 482

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -2

Query: 302 RTASRSPAGPVALKLCPDPA 243
           RT   SPAGP A +L  DPA
Sbjct: 268 RTGGPSPAGPAAARLAEDPA 287



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>PIP1_YEAST (P40020) Polymerase-interacting protein 1 (Factor interacting with|
           REF)
          Length = 925

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 138 STRPEVQRVHENKNDGECGDEQLLR 64
           +T   V +VHEN+N G+  +E  L+
Sbjct: 471 TTNNNVDKVHENRNSGDTNNEDFLK 495


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,379,072
Number of Sequences: 219361
Number of extensions: 662052
Number of successful extensions: 1762
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1761
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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