>gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds
          Length = 2337

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 227 gccggaccgggccggtgtgcgctgcaatgctcatgactttggccgccgtgctccttgctg 286
           |||||||||||||  ||| ||| ||  ||||  |||| |||| ||||| ||||||||| |
Sbjct: 184 gccggaccgggcctctgttcgcagcgttgctgttgacgttggtcgccgcgctccttgccg 243

                                    
Query: 287 tcgccgcgctcgccggggtcaggct 311
           |||||||||| || || ||||||||
Sbjct: 244 tcgccgcgctggctggcgtcaggct 268

>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16
          Length = 346287

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 212    ggcgcgcgcgccctggccggaccgggc 238
              |||||||||||||||||||| ||||||
Sbjct: 248247 ggcgcgcgcgccctggccgggccgggc 248221

>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 212    ggcgcgcgcgccctggccggaccgggc 238
              |||||||||||||||||||| ||||||
Sbjct: 151221 ggcgcgcgcgccctggccgggccgggc 151247

>gb|AF006000.1|AF006000 Bordetella pertussis D-3-phosphoglycerate dehydrogenase homolog
            (serA) and Brg1 (brg1) genes, complete cds
          Length = 10967

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 212  ggcgcgcgcgccctggccggaccgggc 238
            |||||||||||||||||||| ||||||
Sbjct: 3817 ggcgcgcgcgccctggccgggccgggc 3791

>gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObetaFRUCT3 mRNA,
           complete cds
          Length = 2155

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 268 gccgccgtgctccttgctgtcgccgcgctcgccgg 302
           ||||| ||||||||||| || ||||||||||||||
Sbjct: 124 gccgcggtgctccttgccgtggccgcgctcgccgg 158

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 143     gcggcgcgacgtcggcgccggtgccg 168
               ||||||||||||||||| ||||||||
Sbjct: 2793922 gcggcgcgacgtcggcgacggtgccg 2793897

>gb|AC122142.1| Caenorhabditis briggsae cosmid CB019M24, complete sequence
          Length = 111147

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 86    ctcccccttctttggattctcc 107
             ||||||||||||||||||||||
Sbjct: 86791 ctcccccttctttggattctcc 86770

>gb|AC091806.4| Homo sapiens chromosome X clone RP11-320G24 map p11.4, complete
             sequence
          Length = 182440

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 213   gcgcgcgcgccctggccggac 233
             |||||||||||||||||||||
Sbjct: 33331 gcgcgcgcgccctggccggac 33351

>gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p11.4, complete sequence
          Length = 218733

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 213    gcgcgcgcgccctggccggac 233
              |||||||||||||||||||||
Sbjct: 102256 gcgcgcgcgccctggccggac 102276

>emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuranosidase precursor
           (inv1 gene)
          Length = 2250

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 271 gccgtgctccttgctgtcgccgcgctcgccggggtcaggct 311
           ||||||||||||   || |||||||||||||| ||||||||
Sbjct: 183 gccgtgctccttatggttgccgcgctcgccggcgtcaggct 223

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 144     cggcgcgacgtcggcgccggtgccg 168
               |||||||||||||||| ||||||||
Sbjct: 3054733 cggcgcgacgtcggcgacggtgccg 3054757

>gb|AF127795.1| Rhizobium leguminosarum bv. viciae trehalose biosynthetic enzyme TreY
            (treY) gene, partial cds; copper transporter ActP (actP)
            and heavy metal regulator HmrR (hmrR) genes, complete
            cds; and extracytoplasmic sigma factor EcfR (ecfR) gene,
            partial cds
          Length = 5071

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 147  cgcgacgtcggcgccggtgcc 167
            |||||||||||||||||||||
Sbjct: 3396 cgcgacgtcggcgccggtgcc 3376

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 151     acgtcggcgccggtgccgtgg 171
               |||||||||||||||||||||
Sbjct: 6400392 acgtcggcgccggtgccgtgg 6400412

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 309     gcttgccagcgagctgccggc 329
               |||||||||||||||||||||
Sbjct: 3703674 gcttgccagcgagctgccggc 3703694

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 205     caggctgggcgcgcgcgccctggcc 229
               |||||||| ||||||||||||||||
Sbjct: 2601876 caggctggccgcgcgcgccctggcc 2601900

>gb|AC009731.6|AC009731 Homo sapiens 12 BAC RP11-438N16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172749

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 73    cccaccaattcctctcccccttctt 97
             |||||||||||||||||||| ||||
Sbjct: 56802 cccaccaattcctctcccccatctt 56826

>gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, complete sequence
          Length = 163620

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     tcctcccaccaattcctctc 88
              ||||||||||||||||||||
Sbjct: 129674 tcctcccaccaattcctctc 129655

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 190     gacgatgacgaggcccaggc 209
               ||||||||||||||||||||
Sbjct: 1964229 gacgatgacgaggcccaggc 1964248

>emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chromosome 1, complete
             sequence
          Length = 189385

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    aattcctctcccccttcttt 98
             ||||||||||||||||||||
Sbjct: 22490 aattcctctcccccttcttt 22471

>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ggcgcgcgcgccctggccgg 231
              ||||||||||||||||||||
Sbjct: 167244 ggcgcgcgcgccctggccgg 167225

>emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              5/8
          Length = 348408

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    gctgtcgccgcgctcgccgg 302
              ||||||||||||||||||||
Sbjct: 170788 gctgtcgccgcgctcgccgg 170807

>emb|AJ623275.1| Hordeum vulgare mRNA for soluble acid invertase (sai gene)
          Length = 2038

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 80/100 (80%)
 Strand = Plus / Plus

                                                                       
Query: 227 gccggaccgggccggtgtgcgctgcaatgctcatgactttggccgccgtgctccttgctg 286
           |||||||||||||| | || || || || ||| | |||| ||||||  |||| || ||||
Sbjct: 126 gccggaccgggccgctctgtgccgcgattctccttacttcggccgcgctgctgctcgctg 185

                                                   
Query: 287 tcgccgcgctcgccggggtcaggcttgccagcgagctgcc 326
           | |||||||| ||||| |||||| | ||| || |||||||
Sbjct: 186 tggccgcgctggccggcgtcagggtcgccggccagctgcc 225

>gb|AF257937.1|AF257937 Opercularia varia internal transcribed spacer 1, partial sequence;
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 555

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 cggcgtcgggcatcgtcatg 345
           ||||||||||||||||||||
Sbjct: 498 cggcgtcgggcatcgtcatg 479

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     gggcgcgcgcgccctggccg 230
               ||||||||||||||||||||
Sbjct: 1579711 gggcgcgcgcgccctggccg 1579692



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 286     gtcgccgcgctcgccggggt 305
               ||||||||||||||||||||
Sbjct: 1448664 gtcgccgcgctcgccggggt 1448645

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 231     gaccgggccggtgtgcgctg 250
               ||||||||||||||||||||
Sbjct: 3298796 gaccgggccggtgtgcgctg 3298815

>gb|AC009399.5|AC009399 Homo sapiens chromosome 14 clone RP11-368K8 containing KIAA0998 gene,
              partial cds, complete sequence
          Length = 185964

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     aattcctctcccccttcttt 98
              ||||||||||||||||||||
Sbjct: 108332 aattcctctcccccttcttt 108313

>emb|AL357614.5|HS367B10 Homo sapiens chromosome 9 BAC RP11-367B10, complete sequence
          Length = 182378

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    attagcagaggtgataatcg 63
             ||||||||||||||||||||
Sbjct: 64641 attagcagaggtgataatcg 64622

>gb|AC007627.3|AC007627 Genomic Sequence For Arabidopsis thaliana Clone F15F15, Chromosome V,
             complete sequence
          Length = 157000

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    accttcttctcgttcttgtc 40
             ||||||||||||||||||||
Sbjct: 12947 accttcttctcgttcttgtc 12928

>gb|AC007399.1|AC007399 Arabidopsis thaliana BAC F14I23 from chromosome V near 69 cM, complete
             sequence
          Length = 105223

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    accttcttctcgttcttgtc 40
             ||||||||||||||||||||
Sbjct: 69886 accttcttctcgttcttgtc 69867

>emb|AL645583.12| Mouse DNA sequence from clone RP23-12N20 on chromosome 11, complete
             sequence
          Length = 67643

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   ccaggctgggcgcgcgcgcc 223
             ||||||||||||||||||||
Sbjct: 35335 ccaggctgggcgcgcgcgcc 35316


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,159,711
Number of Sequences: 3902068
Number of extensions: 3159711
Number of successful extensions: 56668
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55247
Number of HSP's gapped (non-prelim): 1421
length of query: 351
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 329
effective length of database: 17,147,199,772
effective search space: 5641428724988
effective search space used: 5641428724988
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)