ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet56h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 5e-26
2gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.039
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.15
4dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.15
5ref|NM_183994.1| Oryza sativa (japonica cultivar-group), predic... 38 2.4
6ref|NM_190029.1| Oryza sativa (japonica cultivar-group), predic... 38 2.4
7gb|AE012407.1| Xanthomonas campestris pv. campestris str. ATCC 3... 38 2.4
8gb|AC175205.2| Sporobolomyces roseus clone JGIBAIF-5L1, complete... 38 2.4
9gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 38 2.4
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 2.4
11dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic D... 38 2.4
12dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic D... 38 2.4
13dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic D... 38 2.4
14dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic D... 38 2.4
15dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic D... 38 2.4
16dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 38 2.4
17dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic D... 38 2.4
18dbj|AK069585.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 2.4
19gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 36 9.5
20ref|XM_368933.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 36 9.5
21ref|XM_370365.1| Magnaporthe grisea 70-15 chromosome II hypothet... 36 9.5
22ref|XM_329389.1| Neurospora crassa OR74A 60s ribosomal protein (... 36 9.5
23ref|XM_960154.1| Neurospora crassa OR74A 60s ribosomal protein (... 36 9.5
24gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 36 9.5
25gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 36 9.5
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 36 9.5
27gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom... 36 9.5
28emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 36 9.5
29ref|XM_746108.1| Aspergillus fumigatus Af293 ribosomal protein L... 36 9.5
30emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment ... 36 9.5
31emb|AJ514848.1|NLO514848 Nemogullmia longevariabilis partial 18S... 36 9.5
32emb|AL117158.1|CNS01DQM Botrytis cinerea strain T4 cDNA library 36 9.5
33emb|AL116753.1|CNS01DFD Botrytis cinerea strain T4 cDNA library 36 9.5
34emb|AL116549.1|CNS01D9P Botrytis cinerea strain T4 cDNA library 36 9.5
35emb|AL116132.1|CNS01CY4 Botrytis cinerea strain T4 cDNA library 36 9.5
36emb|AL115290.1|CNS01CAQ Botrytis cinerea strain T4 cDNA library 36 9.5
37emb|AL115061.1|CNS01C4D Botrytis cinerea strain T4 cDNA library 36 9.5
38emb|AL113777.1|CNS01B4P Botrytis cinerea strain T4 cDNA library 36 9.5
39emb|AL113453.1|CNS01AVP Botrytis cinerea strain T4 cDNA library 36 9.5
40emb|AL112567.1|CNS01A73 Botrytis cinerea strain T4 cDNA library 36 9.5
41dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.5
42dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.5
43dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.5
44dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.5
45dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.5
46gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 36 9.5
47dbj|AK109190.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 9.5
48dbj|AK066606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 9.5
49dbj|AK070876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 9.5
50gb|AY106614.1| Zea mays PCO066279 mRNA sequence 36 9.5
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 36 9.5 
>dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-A09,
          full insert sequence
          Length = 1094

 Score =  123 bits (62), Expect = 5e-26
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                      
Query: 3  cacatcacaaacgaagcgcggcacgcaatggcgccctcctcgtcgtctccactgccggcg 62
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 cacatcacaaacgaagcgcggcacgcaatggcgccctcctcgtcgtctccactgccggcg 96

            
Query: 63 tc 64
          ||
Sbjct: 97 tc 98
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.039
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 12      aacgaagcgcggcacgcaatggcgcc 37
               ||||||||||| ||||||||||||||
Sbjct: 2717742 aacgaagcgcgacacgcaatggcgcc 2717717
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 43       cgtcgtctccactgccggcgt 63
                |||||||||||||||||||||
Sbjct: 29537375 cgtcgtctccactgccggcgt 29537355
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>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0655A07
          Length = 172473

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 43     cgtcgtctccactgccggcgt 63
              |||||||||||||||||||||
Sbjct: 101881 cgtcgtctccactgccggcgt 101861
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>ref|NM_183994.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2820

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 34  cgccctcctcgtcgtctcc 52
           |||||||||||||||||||
Sbjct: 308 cgccctcctcgtcgtctcc 326
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>ref|NM_190029.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 426

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 39 tcctcgtcgtctccactgc 57
          |||||||||||||||||||
Sbjct: 44 tcctcgtcgtctccactgc 62
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>gb|AE012407.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 315
            of 460 of the complete genome
          Length = 12052

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 18   gcgcggcacgcaatggcgc 36
            |||||||||||||||||||
Sbjct: 5408 gcgcggcacgcaatggcgc 5390
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>gb|AC175205.2| Sporobolomyces roseus clone JGIBAIF-5L1, complete sequence
          Length = 36144

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    cctcctcgtcgtctccact 55
             |||||||||||||||||||
Sbjct: 33567 cctcctcgtcgtctccact 33549
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 18      gcgcggcacgcaatggcgc 36
               |||||||||||||||||||
Sbjct: 1428926 gcgcggcacgcaatggcgc 1428944
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 39       tcctcgtcgtctccactgc 57
                |||||||||||||||||||
Sbjct: 40891823 tcctcgtcgtctccactgc 40891841



 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 39       tcctcgtcgtctccactgc 57
                |||||||||||||||||||
Sbjct: 24927023 tcctcgtcgtctccactgc 24927005



 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 39       tcctcgtcgtctccactgc 57
                |||||||||||||||||||
Sbjct: 21382762 tcctcgtcgtctccactgc 21382780



 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 34       cgccctcctcgtcgtctcc 52
                |||||||||||||||||||
Sbjct: 13777952 cgccctcctcgtcgtctcc 13777970
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>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506E04
          Length = 139934

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 39     tcctcgtcgtctccactgc 57
              |||||||||||||||||||
Sbjct: 103929 tcctcgtcgtctccactgc 103947
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>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0496H05
          Length = 147817

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 39     tcctcgtcgtctccactgc 57
              |||||||||||||||||||
Sbjct: 104700 tcctcgtcgtctccactgc 104718
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>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0423A12
          Length = 178649

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    tcctcgtcgtctccactgc 57
             |||||||||||||||||||
Sbjct: 20248 tcctcgtcgtctccactgc 20266
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>dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1146B04
          Length = 145186

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 34     cgccctcctcgtcgtctcc 52
              |||||||||||||||||||
Sbjct: 116280 cgccctcctcgtcgtctcc 116298
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>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0501G01
          Length = 154561

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     tcctcgtcgtctccactgc 57
              |||||||||||||||||||
Sbjct: 150143 tcctcgtcgtctccactgc 150125
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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0440D10
          Length = 144340

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    cgccctcctcgtcgtctcc 52
             |||||||||||||||||||
Sbjct: 15355 cgccctcctcgtcgtctcc 15373
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>dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0468H06
          Length = 155031

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    tcctcgtcgtctccactgc 57
             |||||||||||||||||||
Sbjct: 24148 tcctcgtcgtctccactgc 24166
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>dbj|AK069585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022M24, full
           insert sequence
          Length = 3249

 Score = 38.2 bits (19), Expect = 2.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 34  cgccctcctcgtcgtctcc 52
           |||||||||||||||||||
Sbjct: 113 cgccctcctcgtcgtctcc 131
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 26      cgcaatggcgccctcctc 43
               ||||||||||||||||||
Sbjct: 1993455 cgcaatggcgccctcctc 1993472
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>ref|XM_368933.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
          (MG00311.4) partial mRNA
          Length = 888

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 37 cctcctcgtcgtctccac 54
          ||||||||||||||||||
Sbjct: 33 cctcctcgtcgtctccac 50
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>ref|XM_370365.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
            (MG06862.4) partial mRNA
          Length = 2760

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 30   atggcgccctcctcgtcg 47
            ||||||||||||||||||
Sbjct: 1136 atggcgccctcctcgtcg 1119
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>ref|XM_329389.1| Neurospora crassa OR74A 60s ribosomal protein (NCU08344.1) partial
           mRNA
          Length = 369

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 289 tggcgccctcctcgtcgt 272
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>ref|XM_960154.1| Neurospora crassa OR74A 60s ribosomal protein (NCU08344.1) partial
           mRNA
          Length = 369

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 289 tggcgccctcctcgtcgt 272
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 32      ggcgccctcctcgtcgtc 49
               ||||||||||||||||||
Sbjct: 2521888 ggcgccctcctcgtcgtc 2521905
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 32      ggcgccctcctcgtcgtctcca 53
               ||||| ||||||||||||||||
Sbjct: 2907578 ggcgcgctcctcgtcgtctcca 2907557
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 34       cgccctcctcgtcgtctc 51
                ||||||||||||||||||
Sbjct: 31527798 cgccctcctcgtcgtctc 31527815
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>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 34    cgccctcctcgtcgtctc 51
             ||||||||||||||||||
Sbjct: 64798 cgccctcctcgtcgtctc 64781
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 18      gcgcggcacgcaatggcg 35
               ||||||||||||||||||
Sbjct: 3696743 gcgcggcacgcaatggcg 3696726
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>ref|XM_746108.1| Aspergillus fumigatus Af293 ribosomal protein L31e (Afu6g13250)
           partial mRNA
          Length = 372

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 292 tggcgccctcctcgtcgt 275
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>emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment 23/24
          Length = 306550

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 40     cctcgtcgtctccactgc 57
              ||||||||||||||||||
Sbjct: 178513 cctcgtcgtctccactgc 178530
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>emb|AJ514848.1|NLO514848 Nemogullmia longevariabilis partial 18S rRNA gene, isolate 599
          Length = 1067

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 30  atggcgccctcctcgtcg 47
           ||||||||||||||||||
Sbjct: 211 atggcgccctcctcgtcg 228
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>emb|AL117158.1|CNS01DQM Botrytis cinerea strain T4 cDNA library
          Length = 542

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 340 tggcgccctcctcgtcgt 323
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>emb|AL116753.1|CNS01DFD Botrytis cinerea strain T4 cDNA library
          Length = 420

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 278 tggcgccctcctcgtcgt 261
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>emb|AL116549.1|CNS01D9P Botrytis cinerea strain T4 cDNA library
          Length = 516

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 340 tggcgccctcctcgtcgt 323
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>emb|AL116132.1|CNS01CY4 Botrytis cinerea strain T4 cDNA library
          Length = 456

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 322 tggcgccctcctcgtcgt 305
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>emb|AL115290.1|CNS01CAQ Botrytis cinerea strain T4 cDNA library
          Length = 480

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 321 tggcgccctcctcgtcgt 304
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>emb|AL115061.1|CNS01C4D Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 350 tggcgccctcctcgtcgt 333
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>emb|AL113777.1|CNS01B4P Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 30  atggcgccctcctcgtcg 47
           ||||||||||||||||||
Sbjct: 314 atggcgccctcctcgtcg 297
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>emb|AL113453.1|CNS01AVP Botrytis cinerea strain T4 cDNA library
          Length = 470

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 313 tggcgccctcctcgtcgt 296
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>emb|AL112567.1|CNS01A73 Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 31  tggcgccctcctcgtcgt 48
           ||||||||||||||||||
Sbjct: 340 tggcgccctcctcgtcgt 323
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                          
Query: 37       cctcctcgtcgtctccactgccggcg 62
                ||||||||||||| |||| |||||||
Sbjct: 20197682 cctcctcgtcgtccccaccgccggcg 20197657
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 32       ggcgccctcctcgtcgtc 49
                ||||||||||||||||||
Sbjct: 14018787 ggcgccctcctcgtcgtc 14018804
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 34       cgccctcctcgtcgtctc 51
                ||||||||||||||||||
Sbjct: 31618314 cgccctcctcgtcgtctc 31618331
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 37      cctcctcgtcgtctccac 54
               ||||||||||||||||||
Sbjct: 3102183 cctcctcgtcgtctccac 3102200
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>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419H03
          Length = 129020

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 37    cctcctcgtcgtctccac 54
             ||||||||||||||||||
Sbjct: 30337 cctcctcgtcgtctccac 30354
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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 32    ggcgccctcctcgtcgtc 49
             ||||||||||||||||||
Sbjct: 34916 ggcgccctcctcgtcgtc 34933
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>dbj|AK109190.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-B03, full
           insert sequence
          Length = 515

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 32  ggcgccctcctcgtcgtc 49
           ||||||||||||||||||
Sbjct: 146 ggcgccctcctcgtcgtc 163
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>dbj|AK066606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071P22, full
           insert sequence
          Length = 1667

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 32  ggcgccctcctcgtcgtc 49
           ||||||||||||||||||
Sbjct: 118 ggcgccctcctcgtcgtc 135
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>dbj|AK070876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072L05,
          full insert sequence
          Length = 2875

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 32 ggcgccctcctcgtcgtc 49
          ||||||||||||||||||
Sbjct: 48 ggcgccctcctcgtcgtc 65
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>gb|AY106614.1| Zea mays PCO066279 mRNA sequence
          Length = 672

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 35  gccctcctcgtcgtctcc 52
           ||||||||||||||||||
Sbjct: 187 gccctcctcgtcgtctcc 204
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 36.2 bits (18), Expect = 9.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 32       ggcgccctcctcgtcgtc 49
                ||||||||||||||||||
Sbjct: 14027029 ggcgccctcctcgtcgtc 14027046


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 329,515
Number of Sequences: 3902068
Number of extensions: 329515
Number of successful extensions: 24813
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24274
Number of HSP's gapped (non-prelim): 539
length of query: 64
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 43
effective length of database: 17,151,101,840
effective search space: 737497379120
effective search space used: 737497379120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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