ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet56g03 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 115 bits (287), Expect = 4e-26 Identities = 52/67 (77%), Positives = 55/67 (82%) Frame = +1 Query: 133 GTPVNASRAAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 312 GTP+ + FGEGRI MRKT GKPKVAAS SPWYG DRV YLGP SG+PPSYLTGEFP Sbjct: 15 GTPI---KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 71 Query: 313 GDYGWDT 333 GDYGWDT Sbjct: 72 GDYGWDT 78
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 114 bits (284), Expect = 8e-26 Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 2/68 (2%) Frame = +1 Query: 136 TPVNASRAAP--FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEF 309 +P A +AA FGEGRI MRK+A KPK AAS SPWYG+DRVLYLGPLSG+PPSYLTGEF Sbjct: 10 SPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEF 69 Query: 310 PGDYGWDT 333 PGDYGWDT Sbjct: 70 PGDYGWDT 77
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 111 bits (278), Expect = 4e-25 Identities = 52/67 (77%), Positives = 54/67 (80%) Frame = +1 Query: 133 GTPVNASRAAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 312 G P +R FGEGRI MRKTA KPK A S SPWYG+DRVLYLGPLSG PPSYLTGEFP Sbjct: 15 GKPAAGTRDV-FGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFP 73 Query: 313 GDYGWDT 333 GDYGWDT Sbjct: 74 GDYGWDT 80
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 110 bits (274), Expect = 1e-24 Identities = 57/73 (78%), Positives = 60/73 (82%), Gaps = 7/73 (9%) Frame = +1 Query: 136 TPVNASRAAP------FGEGRIAMRKTAGKPKVAASS-SPWYGSDRVLYLGPLSGDPPSY 294 +PV A RAAP FGE RI MRKTA KPK AASS SPWYG+DRVLYLGPLSG+PPSY Sbjct: 10 SPVMA-RAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSY 68 Query: 295 LTGEFPGDYGWDT 333 LTGEFPGDYGWDT Sbjct: 69 LTGEFPGDYGWDT 81
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 105 bits (262), Expect = 3e-23 Identities = 47/63 (74%), Positives = 52/63 (82%) Frame = +1 Query: 145 NASRAAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 324 N +A G+ R+ MRKTA K K +SSSPWYGSDRVLYLGPLSG+PPSYLTGEFPGDYG Sbjct: 20 NLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 79 Query: 325 WDT 333 WDT Sbjct: 80 WDT 82
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 104 bits (260), Expect = 5e-23 Identities = 46/55 (83%), Positives = 47/55 (85%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 GEGRI MRKTAGKPK SSSPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 29 GEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 103 bits (258), Expect = 8e-23 Identities = 48/57 (84%), Positives = 50/57 (87%), Gaps = 1/57 (1%) Frame = +1 Query: 166 FGEGRIAMRKTAGKPKVAASS-SPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 FGE R+ MRKTA K K AASS SPWYG DRVLYLGPLSG+PPSYLTGEFPGDYGWDT Sbjct: 25 FGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 103 bits (258), Expect = 8e-23 Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 1/68 (1%) Frame = +1 Query: 133 GTPVNASRAAPFGEGRIAMRKTAGKPK-VAASSSPWYGSDRVLYLGPLSGDPPSYLTGEF 309 G VN ++ FGE R+ MRKTA K K AAS SPWYG DRVLYLGPLSG+PPSYLTGEF Sbjct: 15 GKAVNVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEF 73 Query: 310 PGDYGWDT 333 PGDYGWDT Sbjct: 74 PGDYGWDT 81
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 97.8 bits (242), Expect = 6e-21 Identities = 48/69 (69%), Positives = 50/69 (72%), Gaps = 2/69 (2%) Frame = +1 Query: 133 GTPVNASRAAP--FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306 G VN S AA G GR+ MRKT KPK S SPWYGSDRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVNLSPAASEVLGSGRVTMRKTVAKPK-GPSGSPWYGSDRVKYLGPFSGESPSYLTGE 73 Query: 307 FPGDYGWDT 333 FPGDYGWDT Sbjct: 74 FPGDYGWDT 82
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 97.4 bits (241), Expect = 8e-21 Identities = 44/56 (78%), Positives = 46/56 (82%), Gaps = 1/56 (1%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAAS-SSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 GE R+ MRK GK VAAS SPWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDT Sbjct: 39 GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 94
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 96.3 bits (238), Expect = 2e-20 Identities = 42/55 (76%), Positives = 45/55 (81%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G GR+ MRKTA K K A+S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 29 GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 96.3 bits (238), Expect = 2e-20 Identities = 47/69 (68%), Positives = 51/69 (73%), Gaps = 2/69 (2%) Frame = +1 Query: 133 GTPVNASRAAP--FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306 G V S +AP G GR++MRKT KP ASSSPWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGPFSGESPSYLTGE 72 Query: 307 FPGDYGWDT 333 FPGDYGWDT Sbjct: 73 FPGDYGWDT 81
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 95.5 bits (236), Expect = 3e-20 Identities = 47/69 (68%), Positives = 49/69 (71%), Gaps = 2/69 (2%) Frame = +1 Query: 133 GTPVNASRAAP--FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306 G V S AA G GR+ MRKT KPK S SPWYGSDRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKLSPAASEVLGSGRVTMRKTVAKPK-GPSGSPWYGSDRVKYLGPFSGESPSYLTGE 73 Query: 307 FPGDYGWDT 333 FPGDYGWDT Sbjct: 74 FPGDYGWDT 82
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 95.5 bits (236), Expect = 3e-20 Identities = 42/56 (75%), Positives = 46/56 (82%), Gaps = 1/56 (1%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAAS-SSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 GE R+ MRK G+ VAAS SPWYG DRV+YLGP SG+PPSYLTGEFPGDYGWDT Sbjct: 39 GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDT 94
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 95.1 bits (235), Expect = 4e-20 Identities = 40/55 (72%), Positives = 44/55 (80%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G G++ MRKTA K K +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 29 GNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 94.4 bits (233), Expect = 6e-20 Identities = 40/55 (72%), Positives = 44/55 (80%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G G++ MRKTA K K +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 28 GNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 94.4 bits (233), Expect = 6e-20 Identities = 40/55 (72%), Positives = 44/55 (80%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G G++ MRKTA K K +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 28 GNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 94.0 bits (232), Expect = 8e-20 Identities = 40/55 (72%), Positives = 45/55 (81%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G G++ MRKTA K K +SSSPWYG +RV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 29 GNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDT 83
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 93.6 bits (231), Expect = 1e-19 Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 1/60 (1%) Frame = +1 Query: 157 AAPFGEGRIAMRK-TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 A GE R+ MRK T K +AS+SPWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDT Sbjct: 31 AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 93.2 bits (230), Expect = 1e-19 Identities = 41/64 (64%), Positives = 49/64 (76%) Frame = +1 Query: 142 VNASRAAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDY 321 +++S + G G++ MRKT K K A+SSSPWYG DRV YLGP SG+ PSYLTGEFP DY Sbjct: 20 LSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDY 79 Query: 322 GWDT 333 GWDT Sbjct: 80 GWDT 83
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 93.2 bits (230), Expect = 1e-19 Identities = 44/63 (69%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Frame = +1 Query: 148 ASRAAP-FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 324 AS + P G GR++MRKTA K +S SPWYG DRV YLGP SG+PPSYLTGEFPGDYG Sbjct: 1 ASPSTPQLGVGRVSMRKTASK--TVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYG 58 Query: 325 WDT 333 WDT Sbjct: 59 WDT 61
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 92.8 bits (229), Expect = 2e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = +1 Query: 166 FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 FG GR+ MRKT KP S SPWYGSDRV YLGP SG+PPSYLTGEFPGDYGWDT Sbjct: 28 FGTGRVTMRKTV-KP-TGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 81
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 92.0 bits (227), Expect = 3e-19 Identities = 44/70 (62%), Positives = 48/70 (68%), Gaps = 3/70 (4%) Frame = +1 Query: 133 GTPVNASR---AAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTG 303 G PV S + G R MRK+A KVA+S SPWYG DRV YLGP SG+ PSYLTG Sbjct: 15 GKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTG 74 Query: 304 EFPGDYGWDT 333 EFPGDYGWDT Sbjct: 75 EFPGDYGWDT 84
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 92.0 bits (227), Expect = 3e-19 Identities = 40/55 (72%), Positives = 43/55 (78%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G G+ MRKTA K K +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 29 GNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 91.7 bits (226), Expect = 4e-19 Identities = 39/55 (70%), Positives = 43/55 (78%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G G++ MRKT K K +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 29 GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 90.9 bits (224), Expect = 7e-19 Identities = 40/55 (72%), Positives = 43/55 (78%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G R MRK+A KVA+S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 31 GAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 85
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 90.9 bits (224), Expect = 7e-19 Identities = 42/68 (61%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Frame = +1 Query: 133 GTPVNASRAAPF-GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEF 309 G VN ++ G G+ MRKT K K +S SPWYG DRV YLGP SG+ PSYLTGEF Sbjct: 15 GKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74 Query: 310 PGDYGWDT 333 PGDYGWDT Sbjct: 75 PGDYGWDT 82
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 90.5 bits (223), Expect = 9e-19 Identities = 39/55 (70%), Positives = 42/55 (76%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G G+ MRKT K K +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 29 GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 90.1 bits (222), Expect = 1e-18 Identities = 42/64 (65%), Positives = 46/64 (71%) Frame = +1 Query: 142 VNASRAAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDY 321 V S + FG GR++MRKT P S SPWYG DRV YLGP SG+ PSYLTGEFPGDY Sbjct: 20 VAPSSSELFGNGRVSMRKTVKAP---VSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDY 76 Query: 322 GWDT 333 GWDT Sbjct: 77 GWDT 80
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 90.1 bits (222), Expect = 1e-18 Identities = 39/55 (70%), Positives = 42/55 (76%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G G+ MRKT K K +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 29 GNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 89.7 bits (221), Expect = 2e-18 Identities = 38/53 (71%), Positives = 42/53 (79%) Frame = +1 Query: 175 GRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G++ MRKT K K +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 30 GKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 82
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 88.6 bits (218), Expect = 4e-18 Identities = 44/69 (63%), Positives = 47/69 (68%), Gaps = 2/69 (2%) Frame = +1 Query: 133 GTPVNASRAAPF--GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 306 G V S AP G + MRKTA K +S SPWYG DRV YLGP SG+PPSYLTGE Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62 Query: 307 FPGDYGWDT 333 FPGDYGWDT Sbjct: 63 FPGDYGWDT 71
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 88.6 bits (218), Expect = 4e-18 Identities = 41/55 (74%), Positives = 42/55 (76%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G GRI MRK K A SSSPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 29 GNGRITMRKAVAKS--APSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 81
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 88.6 bits (218), Expect = 4e-18 Identities = 43/71 (60%), Positives = 49/71 (69%), Gaps = 5/71 (7%) Frame = +1 Query: 136 TPVNASRAAPFGE-----GRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLT 300 +P A +A G GR++MRKT K +S SPWYG DRV YLGP SG+PPSYLT Sbjct: 11 SPSLAGKAVKLGPSAPEVGRVSMRKTVTKQ--VSSGSPWYGPDRVKYLGPFSGEPPSYLT 68 Query: 301 GEFPGDYGWDT 333 GEFPGDYGWDT Sbjct: 69 GEFPGDYGWDT 79
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 87.0 bits (214), Expect = 1e-17 Identities = 39/55 (70%), Positives = 43/55 (78%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G+ R++MRKTA KV SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 29 GDARVSMRKTAATKKVG---SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 80
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 82.4 bits (202), Expect = 3e-16 Identities = 42/66 (63%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Frame = +1 Query: 139 PVNA-SRAAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPG 315 PVN SR GE R+ M K A S S WYGSDR LYLGP SG PPSYL+GEFPG Sbjct: 19 PVNELSRKVGAGEARVQMMAPKSK---APSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPG 75 Query: 316 DYGWDT 333 DYGWDT Sbjct: 76 DYGWDT 81
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 78.2 bits (191), Expect = 5e-15 Identities = 37/56 (66%), Positives = 39/56 (69%) Frame = +1 Query: 166 FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 FGEGRI MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDT Sbjct: 30 FGEGRITMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 81
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 77.8 bits (190), Expect = 6e-15 Identities = 33/41 (80%), Positives = 36/41 (87%) Frame = +1 Query: 211 KVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 KVA+SSSPW+G D V YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDT 44
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 73.6 bits (179), Expect = 1e-13 Identities = 35/56 (62%), Positives = 37/56 (66%) Frame = +1 Query: 166 FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 FG GR MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDT Sbjct: 30 FGGGRATMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 81
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 72.8 bits (177), Expect = 2e-13 Identities = 34/55 (61%), Positives = 39/55 (70%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G GR++MR+T +A +S WYG DR YLGP S PSYLTGEFPGDYGWDT Sbjct: 31 GGGRVSMRRTVK----SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDT 81
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 72.8 bits (177), Expect = 2e-13 Identities = 34/49 (69%), Positives = 38/49 (77%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPG 315 G GR++MRKTA PK +S SPWYG DRV YLGP SG+ PSYLTGEF G Sbjct: 28 GVGRVSMRKTA--PKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG 74
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 72.8 bits (177), Expect = 2e-13 Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 2/67 (2%) Frame = +1 Query: 139 PVNASRAAPFG--EGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 312 PVN G E R+ MR+T K A S + WYG+DR +LGP SG+ PSYL GEF Sbjct: 20 PVNELSRKVLGNVEARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEFA 77 Query: 313 GDYGWDT 333 GDYGWDT Sbjct: 78 GDYGWDT 84
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 72.0 bits (175), Expect = 3e-13 Identities = 34/56 (60%), Positives = 37/56 (66%) Frame = +1 Query: 166 FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 FG+ R MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDT Sbjct: 30 FGQARFTMRRTVK----SAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDT 81
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 72.0 bits (175), Expect = 3e-13 Identities = 34/56 (60%), Positives = 37/56 (66%) Frame = +1 Query: 166 FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 F GR+ MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDT Sbjct: 2 FEGGRVTMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 53
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 71.2 bits (173), Expect = 6e-13 Identities = 34/56 (60%), Positives = 36/56 (64%) Frame = +1 Query: 166 FGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 F GR MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDT Sbjct: 30 FNGGRATMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 81
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 71.2 bits (173), Expect = 6e-13 Identities = 34/53 (64%), Positives = 36/53 (67%) Frame = +1 Query: 175 GRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 GRI MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDT Sbjct: 31 GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 79
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 70.9 bits (172), Expect = 8e-13 Identities = 33/53 (62%), Positives = 37/53 (69%) Frame = +1 Query: 175 GRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 GR++MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDT Sbjct: 32 GRVSMRRTIK----SAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 80
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 70.1 bits (170), Expect = 1e-12 Identities = 33/60 (55%), Positives = 38/60 (63%) Frame = +1 Query: 154 RAAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 R +GR +MR+T A S WYG+DR +LGP S PSYLTGEFPGDYGWDT Sbjct: 25 RKVGVSDGRFSMRRTVK----AVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDT 80
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 69.3 bits (168), Expect = 2e-12 Identities = 33/54 (61%), Positives = 36/54 (66%) Frame = +1 Query: 172 EGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 + RI MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDT Sbjct: 33 QARITMRRTVR----SAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDT 82
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 67.4 bits (163), Expect = 8e-12 Identities = 28/44 (63%), Positives = 30/44 (68%) Frame = +1 Query: 202 GKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G + S+ WYG DRV YLGP S PSYL GEFPGDYGWDT Sbjct: 36 GSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDT 79
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 67.4 bits (163), Expect = 8e-12 Identities = 37/74 (50%), Positives = 41/74 (55%), Gaps = 12/74 (16%) Frame = +1 Query: 148 ASRAA----PF--GEGRIAMRK------TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPS 291 ASRA PF G+GR A A ++ + WYG DRV YLGP S PS Sbjct: 9 ASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPS 68 Query: 292 YLTGEFPGDYGWDT 333 YL GEFPGDYGWDT Sbjct: 69 YLNGEFPGDYGWDT 82
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 63.9 bits (154), Expect = 9e-11 Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 5/55 (9%) Frame = +1 Query: 184 AMRKTAGKPKVAASSSP-----WYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 A +K AG + A+ + WYG DR +LGP S + P+YLTGEFPGDYGWDT Sbjct: 17 AAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDT 71
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 62.0 bits (149), Expect = 4e-10 Identities = 31/49 (63%), Positives = 35/49 (71%) Frame = +1 Query: 187 MRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 M K A K KV++S+ RV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 41 MLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDT 85
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 56.2 bits (134), Expect = 2e-08 Identities = 25/41 (60%), Positives = 29/41 (70%), Gaps = 1/41 (2%) Frame = +1 Query: 214 VAASSSPWYGSDRVLYLGPLS-GDPPSYLTGEFPGDYGWDT 333 V ++ +YG DR +LGP S D P YLTGEFPGDYGWDT Sbjct: 26 VPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDT 66
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 55.8 bits (133), Expect = 3e-08 Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = +1 Query: 148 ASRAAPFGEGRIAMRKTAGKPKVAASSS-PWYGSDRVLYLGPLSGDP-PSYLTGEFPGDY 321 ASR A + +KTA K SS +YG +R +LGP S + P+YLTGEFPGDY Sbjct: 6 ASRKALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDY 65 Query: 322 GWDT 333 GWDT Sbjct: 66 GWDT 69
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 52.4 bits (124), Expect = 3e-07 Identities = 20/22 (90%), Positives = 21/22 (95%) Frame = +1 Query: 268 PLSGDPPSYLTGEFPGDYGWDT 333 P SG+PPSYLTGEFPGDYGWDT Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDT 22
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/23 (73%), Positives = 18/23 (78%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPW 237 G GRI MRKTA KPK A+S SPW Sbjct: 29 GNGRITMRKTAAKPKPASSGSPW 51
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/23 (73%), Positives = 18/23 (78%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPW 237 G GRI MRKTA KPK A+S SPW Sbjct: 29 GNGRITMRKTAAKPKPASSGSPW 51
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 39.3 bits (90), Expect = 0.002 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Frame = +1 Query: 136 TPVNASRAAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYL--GPLS-GDPPSYLTGE 306 +P A F + + A K+ + + + WYG DR ++L G L + P YL GE Sbjct: 29 SPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 88 Query: 307 FPGDYGWD 330 GDYG+D Sbjct: 89 VAGDYGYD 96
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 38.1 bits (87), Expect = 0.006 Identities = 20/53 (37%), Positives = 27/53 (50%) Frame = +1 Query: 175 GRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 333 G+ + K ++S++ +YG D L P TGEFPGDYGWDT Sbjct: 37 GKSTKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDT 88
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 33.5 bits (75), Expect = 0.14 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = +1 Query: 133 GTPVNASRAAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 312 G+ V ++A+ G R+ + K + P ++++ +D L PP +L G P Sbjct: 24 GSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLP 83 Query: 313 GDYGWD 330 GD+G+D Sbjct: 84 GDFGFD 89
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 32.0 bits (71), Expect = 0.39 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +1 Query: 133 GTPVNASRAAPFGEGRIAMRK---TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTG 303 G+ V A++A+ G R+ + K G VA S+ DR L+ PP +L G Sbjct: 24 GSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVA-ADPDRPLWFP--GSTPPEWLDG 80 Query: 304 EFPGDYGWD 330 PGD+G+D Sbjct: 81 SLPGDFGFD 89
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +1 Query: 205 KPKVAASSSPWYGSDRVLYLGPLSGD------PPSYLTGEFPGDYGWDT 333 K K AA+ + G+ + +S D PSYL G PGD+G+D+ Sbjct: 23 KSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDS 71
>K1543_MOUSE (Q80VC9) Protein KIAA1543| Length = 1252 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = -3 Query: 175 PRRRAPPWRHSPGCRPSPGRRAP 107 P RRAP R SPG PSP R+P Sbjct: 757 PARRAPAARRSPGPGPSPTPRSP 779
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 29.3 bits (64), Expect = 2.6 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 283 PPSYLTGEFPGDYGWD 330 PP++LTGE+P D G+D Sbjct: 168 PPAHLTGEYPADRGFD 183
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 29.3 bits (64), Expect = 2.6 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +1 Query: 274 SGDPPSYLTGEFPGDYGWD 330 + +PP+ LTGE+P D G+D Sbjct: 193 NAEPPALLTGEYPADRGFD 211
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +1 Query: 196 TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 324 TA ++A PW+G ++ L G P + G FPG G Sbjct: 112 TAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 28.5 bits (62), Expect = 4.4 Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 6/69 (8%) Frame = +1 Query: 142 VNASRAAPF---GEGRIAMRKTAGKPKVAA--SSSPWYGSDRVL-YLGPLSGDPPSYLTG 303 + +R AP G GR GK K A S+ +DR L Y G +S P +L G Sbjct: 14 IMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAIS---PDWLDG 70 Query: 304 EFPGDYGWD 330 GDYG+D Sbjct: 71 SLVGDYGFD 79
>O11H6_HUMAN (Q8NGC7) Olfactory receptor 11H6 (Olfactory receptor OR14-35)| Length = 330 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +1 Query: 142 VNASRAAPFGEGRIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDP 285 + A P G GR T G + S +YG+ V+Y+ P SG+P Sbjct: 240 IRAVLCIPSGAGRTKAFSTCGSHLMVVSL--FYGTLMVMYVSPTSGNP 285
>AROC_PYRAB (Q9V1H0) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 356 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = -2 Query: 254 TRSEPYHGLLDAATLGLPAVLRMAMRPSP 168 T++ + G+L T G+P + R+A +P+P Sbjct: 268 TKTNNHGGVLGGITTGMPIIARIAFKPTP 296
>SYT3_RAT (P40748) Synaptotagmin-3 (Synaptotagmin III) (SytIII)| Length = 588 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +3 Query: 114 LLPGDGRHPGECLQGGALRRGPHRHA 191 L+ G G H G L G L GPH HA Sbjct: 110 LVGGGGHHLGASLGGHPLLGGPHHHA 135
>GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 358 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +1 Query: 232 PWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 324 PW+G ++ L L G+P + G FPG G Sbjct: 128 PWFGLEQEYTLFDLYGNPYGWPKGGFPGPQG 158
>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)| Length = 3866 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Frame = -3 Query: 175 PRRRAP---PWRHSPGCRPSPGRRAP 107 PR R P P + SPGCRP P +P Sbjct: 2044 PRIRTPSYSPTQRSPGCRPLPSAGSP 2069
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Frame = -3 Query: 175 PRRRAP---PWRHSPGCRPSPGRRAP 107 PR R P P + SPGCRP P +P Sbjct: 2143 PRIRTPSYSPTQRSPGCRPLPSAGSP 2168
>HUR_STRAU (Q00923) Hydroxyurea phosphotransferase (EC 2.7.-.-) (Hydroxyurea| resistance protein) Length = 340 Score = 28.1 bits (61), Expect = 5.7 Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 24/89 (26%) Frame = +1 Query: 133 GTPVNASRAAPFGEGRI------AMRKTAGKP-------------KVAASSSPWYGSDRV 255 G P A R A GE R+ A+ + A +P +A PW D Sbjct: 201 GVPEAAGRLADAGERRLLRDCAAALAEVAAEPGDRLLHWDLHFGNVLAGEREPWLAIDP- 259 Query: 256 LYLGPLSGDP-----PSYLTGEFPGDYGW 327 PL+GDP P+ + G G+ GW Sbjct: 260 ---KPLAGDPGFELLPALVNGFRAGEVGW 285
>GLNA_SUIBO (Q8J1R3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +1 Query: 214 VAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 324 +A S PW+G ++ L G P + G FPG G Sbjct: 118 LAKDSVPWFGLEQEYTLFDADGTPFGWPKGGFPGPQG 154
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +1 Query: 190 RKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 330 RK + + A++ G++R L+ S SYL G PGD+G+D Sbjct: 33 RKASFVVRAASTPPVKQGANRQLWFA--SKQSLSYLDGRLPGDFGFD 77
>GPX42_RAT (Q91XR8) Phospholipid hydroperoxide glutathione peroxidase, nuclear| (EC 1.11.1.12) (GPX-4) Length = 253 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = -3 Query: 178 GPRRRAPPWRHSPGCRPSPGRR 113 G RRR P R SP RP P RR Sbjct: 20 GGRRRREPGRQSPRKRPGPRRR 41
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/23 (60%), Positives = 14/23 (60%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPW 237 G GRI MRK K A SSSPW Sbjct: 29 GNGRITMRKAVAKS--APSSSPW 49
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/23 (60%), Positives = 14/23 (60%) Frame = +1 Query: 169 GEGRIAMRKTAGKPKVAASSSPW 237 G GRI MRK K A SSSPW Sbjct: 29 GNGRITMRKAVAKS--APSSSPW 49
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = +1 Query: 178 RIAMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 330 R R G K + + SDR L+ P YL G GDYG+D Sbjct: 28 RFTARFGFGTKKASPKKAKTVISDRPLWFP--GAKSPEYLDGSLVGDYGFD 76 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,153,919 Number of Sequences: 219361 Number of extensions: 549903 Number of successful extensions: 2128 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 1951 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2103 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
