| Clone Name | baet56g02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 88 gatgtcggggcagacgcagagactgaacgtggtgccgacggtg 130 ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 126205 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtg 126247
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 88 gatgtcggggcagacgcagagactgaacgtggtgccgacggtg 130 ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 32766772 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtg 32766814
>dbj|AK106989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A07, full insert sequence Length = 1144 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 88 gatgtcggggcagacgcagagactgaacgtggtgccgacggtg 130 ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtg 103
>dbj|AK067501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H12, full insert sequence Length = 1438 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 88 gatgtcggggcagacgcagagactgaacgtggtgccgacggtg 130 ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 226 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtg 268
>emb|AL732332.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F03, complete sequence Length = 91539 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 88 gatgtcggggcagacgcagagactgaacgtggtgccgacggtg 130 ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 37018 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtg 37060
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 88 gatgtcggggcagacgcagagactgaacgtggtgccgacggtg 130 ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 29062 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtg 29104
>ref|XM_474080.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 810 Score = 67.9 bits (34), Expect = 7e-09 Identities = 40/42 (95%) Strand = Plus / Plus Query: 89 atgtcggggcagacgcagagactgaacgtggtgccgacggtg 130 |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1 atgtcggggcagacgcagcgcctgaacgtggtgccgacggtg 42
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 agagactgaacgtggtgcc 123 ||||||||||||||||||| Sbjct: 129550 agagactgaacgtggtgcc 129532
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 agagactgaacgtggtgcc 123 ||||||||||||||||||| Sbjct: 79523 agagactgaacgtggtgcc 79505
>ref|XM_571098.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE00340) partial mRNA Length = 1809 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 agagactgaacgtggtgcc 123 ||||||||||||||||||| Sbjct: 824 agagactgaacgtggtgcc 842 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 304,388 Number of Sequences: 3902068 Number of extensions: 304388 Number of successful extensions: 17136 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 17112 Number of HSP's gapped (non-prelim): 24 length of query: 130 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 109 effective length of database: 17,151,101,840 effective search space: 1869470100560 effective search space used: 1869470100560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)