>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score =  128 bits (322), Expect = 4e-30
 Identities = 66/69 (95%), Positives = 67/69 (97%)
 Frame = +2

Query: 2   GVDAAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTLDEIQS 181
           GVDA ARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGA+AEGAPKRLT DEIQS
Sbjct: 34  GVDAGARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGATAEGAPKRLTFDEIQS 93

Query: 182 KTYMEVKGT 208
           KTYMEVKGT
Sbjct: 94  KTYMEVKGT 102

>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score =  108 bits (269), Expect = 5e-24
 Identities = 54/70 (77%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2   GVDAA-ARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTLDEIQ 178
           G+D++ AR+TCSL SD+++ A KC+DAAK+AGFALATSAL+VSGA AEGAPKRLT DEIQ
Sbjct: 38  GLDSSQARLTCSLHSDLKDFAGKCSDAAKIAGFALATSALVVSGAGAEGAPKRLTYDEIQ 97

Query: 179 SKTYMEVKGT 208
           SKTYMEVKGT
Sbjct: 98  SKTYMEVKGT 107

>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  107 bits (267), Expect = 8e-24
 Identities = 50/65 (76%), Positives = 59/65 (90%)
 Frame = +2

Query: 14  AARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTLDEIQSKTYM 193
           A R+TCS+ SD+R++A KC DAAK+AGFALATSAL++SGASAEG PKRLT DEIQSKTYM
Sbjct: 41  AGRLTCSINSDLRDIAQKCTDAAKLAGFALATSALVISGASAEGVPKRLTFDEIQSKTYM 100

Query: 194 EVKGT 208
           EVKG+
Sbjct: 101 EVKGS 105

>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  106 bits (265), Expect = 1e-23
 Identities = 51/64 (79%), Positives = 60/64 (93%)
 Frame = +2

Query: 17  ARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTLDEIQSKTYME 196
           A++TCSLQSD +E+A KC +A+K+AGFALATSAL+VSGASAEGAPKRLT DEIQSKTY+E
Sbjct: 41  AKVTCSLQSDFKELAHKCVEASKIAGFALATSALVVSGASAEGAPKRLTFDEIQSKTYLE 100

Query: 197 VKGT 208
           VKGT
Sbjct: 101 VKGT 104

>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  106 bits (264), Expect = 2e-23
 Identities = 51/65 (78%), Positives = 60/65 (92%)
 Frame = +2

Query: 14  AARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTLDEIQSKTYM 193
           + R+TCSLQ++I+E+A KC DAAK+AGFALATSAL+VSGA+AEG PKRLT DEIQSKTYM
Sbjct: 41  SGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYM 100

Query: 194 EVKGT 208
           EVKGT
Sbjct: 101 EVKGT 105

>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score =  105 bits (263), Expect = 2e-23
 Identities = 51/66 (77%), Positives = 59/66 (89%)
 Frame = +2

Query: 11  AAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTLDEIQSKTY 190
           ++AR+TCS QSD ++   KC+DA K+AGFALATSAL+VSGASAEGAPKRLT DEIQSKTY
Sbjct: 43  SSARLTCSFQSDFKDFTGKCSDAVKIAGFALATSALVVSGASAEGAPKRLTYDEIQSKTY 102

Query: 191 MEVKGT 208
           MEVKGT
Sbjct: 103 MEVKGT 108

>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score =  105 bits (263), Expect = 2e-23
 Identities = 50/66 (75%), Positives = 61/66 (92%)
 Frame = +2

Query: 11  AAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTLDEIQSKTY 190
           +A+R++CSLQ+D+++ A KC DAAK+AGFALATSAL+VSGA+AEG PKRLT DEIQSKTY
Sbjct: 43  SASRLSCSLQTDLKDFAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTFDEIQSKTY 102

Query: 191 MEVKGT 208
           MEVKGT
Sbjct: 103 MEVKGT 108

>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  104 bits (260), Expect = 6e-23
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = +2

Query: 11  AAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTLDEIQSKTY 190
           AAAR+TCSLQ++++++A K  DAAK+AGFALATSAL+VSGA+AEG PKRLT DEIQSKTY
Sbjct: 43  AAARLTCSLQTELKDLAQKFTDAAKVAGFALATSALVVSGANAEGVPKRLTFDEIQSKTY 102

Query: 191 MEVKGT 208
           MEVKGT
Sbjct: 103 MEVKGT 108

>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score = 91.3 bits (225), Expect = 6e-19
 Identities = 48/72 (66%), Positives = 61/72 (84%), Gaps = 3/72 (4%)
 Frame = +2

Query: 2   GVDAAA---RITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTLDE 172
           GV++A+   R++ SLQSD++E+A+KC DA K+AG ALATSAL+ SGA+AEG  KRLT DE
Sbjct: 36  GVESASSGGRLSLSLQSDLKELANKCVDATKLAGLALATSALIASGANAEGG-KRLTYDE 94

Query: 173 IQSKTYMEVKGT 208
           IQSKTY+EVKGT
Sbjct: 95  IQSKTYLEVKGT 106

>PSBO_BRARA (P83504) Oxygen-evolving enhancer protein 1, chloroplast (OEE1)|
           (Fragment)
          Length = 31

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +2

Query: 140 EGAPKRLTLDEIQSKTYMEVKGT 208
           EGAPKRLT DEIQSKTYMEVKGT
Sbjct: 1   EGAPKRLTYDEIQSKTYMEVKGT 23

>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +2

Query: 50  REVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTLDEIQSKTYMEVKGT 208
           R V +     A+   F  A +A++ + A   G+   LT DE+Q  TY++VKGT
Sbjct: 17  RPVRANVVCKAQKVEFGQAAAAVVAASALVAGSANALTYDELQGLTYLQVKGT 69

>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score = 34.3 bits (77), Expect = 0.091
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = +2

Query: 14  AARITCSLQSDIREVASKCADA----AKMAGFALATSALLVSGASAEGAPKRLTLDEIQS 181
           A R   S ++ +R      A A    A+  G A A +AL    A   G+   LT DEIQ 
Sbjct: 2   ALRAAQSAKAGVRAARPNRATAVVCKAQKVGQAAAAAALAT--AMVAGSANALTFDEIQG 59

Query: 182 KTYMEVKGT 208
            TY++VKG+
Sbjct: 60  LTYLQVKGS 68

>LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 4 precursor
          Length = 635

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = -1

Query: 157 PLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGA--RDPGGSVD 5
           P  RP R+C+ D    GC G A  LGG  A        GL GA  R  GGS +
Sbjct: 576 PPPRPQRSCSLDLGDAGCYGYARRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 628

>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 80  AKMAGFALATSALLVSGASAEGA-PKRLTLDEIQSKTYMEVKGT 208
           A +AG   A  A L+  A A  A    LT DE+QS +Y+EVK +
Sbjct: 69  AVLAGAGRAMGAALIGAAVAGSANAASLTYDELQSLSYLEVKSS 112

>CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like protein 2)|
          Length = 1285

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 199 HLHVGLALDFVEGQPLGRPLRTCARDEEGRGC 104
           H+HVG  L   + QP G P R C +D    GC
Sbjct: 744 HVHVGGRLLAADSQPWGGPFRGCLQDLRLDGC 775

>LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 4 precursor
          Length = 636

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -1

Query: 157 PLGRPLRTCARD-EEGRGCEGEAGHLGGVGALACDLPDVGLQGA--RDPGGSVD 5
           P  RP R+C+ D  +  GC G A  LGG  A        GL GA  R  GGS +
Sbjct: 576 PPPRPQRSCSLDLGDTGGCYGYARRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 629

>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)|
           (Forkhead-related transcription factor 3) (FREAC-3)
          Length = 553

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 115 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGG 14
           G G  G AG  GG G   C+L  + L  A + GG
Sbjct: 377 GGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGG 410

>ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (Zinc finger|
           DHHC domain-containing protein 18) (DHHC-18)
          Length = 388

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 7/36 (19%)
 Frame = +3

Query: 3   ASTLP--PGSRAP---CNPTSGRSQA--SAPTPPRW 89
           A+ LP  PG+R P    +PT G   A  +AP PPRW
Sbjct: 13  AAPLPASPGARRPGPAASPTPGPGPAPPAAPAPPRW 48

>NIR_BETVE (P38500) Ferredoxin--nitrite reductase, chloroplast precursor (EC|
           1.7.7.1)
          Length = 583

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 130 ARDEEGRGCEGEAGHLGG 77
           ARDE G+ CEG A  LGG
Sbjct: 521 ARDENGKPCEGAAVFLGG 538

>OPN4_HUMAN (Q9UHM6) Melanopsin (Opsin-4)|
          Length = 478

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 15 PPGSRAPCNPTSGRSQASAPTPPRW 89
          P G R P +PT   S  + P PP W
Sbjct: 4  PSGPRVPPSPTQEPSCMATPAPPSW 28

>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)|
          Length = 637

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -1

Query: 127 RDEEGRGCEGEAGHLGGVGALACDLP--DVGLQGARDPGGSVDA 2
           R E  R  EG+A      GA    +P   V  +G+ D GGSVDA
Sbjct: 129 RGEAAREAEGQAAAPAAPGAQEEAVPGDSVDAEGSIDAGGSVDA 172


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,317,930
Number of Sequences: 219361
Number of extensions: 463759
Number of successful extensions: 2306
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2305
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)