ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet56f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AKAP1_RAT (O88884) A kinase anchor protein 1, mitochondrial prec... 28 9.7
2AKAP1_HUMAN (Q92667) A kinase anchor protein 1, mitochondrial pr... 28 9.7
3AKAP1_MOUSE (O08715) A kinase anchor protein 1, mitochondrial pr... 28 9.7

>AKAP1_RAT (O88884) A kinase anchor protein 1, mitochondrial precursor|
          (Protein kinase A-anchoring protein 1) (PRKA1)
          (A-kinase anchor protein 121 kDa) (AKAP 121) (Dual
          specificity A-kinase-anchoring protein 1) (D-AKAP-1)
          (Spermatid A-kinase anchor protei
          Length = 854

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 31 LGWWWLFSRR 2
          LGWWW FSR+
Sbjct: 20 LGWWWFFSRK 29



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>AKAP1_HUMAN (Q92667) A kinase anchor protein 1, mitochondrial precursor|
          (Protein kinase A-anchoring protein 1) (PRKA1)
          (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual
          specificity A-kinase-anchoring protein 1) (D-AKAP-1)
          (Spermatid A-kinase anchor prot
          Length = 903

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 31 LGWWWLFSRR 2
          LGWWW FSR+
Sbjct: 20 LGWWWFFSRK 29



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>AKAP1_MOUSE (O08715) A kinase anchor protein 1, mitochondrial precursor|
          (Protein kinase A-anchoring protein 1) (PRKA1)
          (Dual-specificity A-kinase-anchoring protein 1)
          (D-AKAP-1) (Spermatid A-kinase anchor protein) (S-AKAP)
          Length = 857

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 31 LGWWWLFSRR 2
          LGWWW FSR+
Sbjct: 20 LGWWWFFSRK 29


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,836,344
Number of Sequences: 219361
Number of extensions: 8442
Number of successful extensions: 44
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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