| Clone Name | baet56f09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ630120.2| Hordeum vulgare subsp. vulgare mRNA for C2 domain-containing protein, clone Chromi12 Length = 1274 Score = 46.1 bits (23), Expect = 0.003 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccaccatcctag 31 ||||||||||||||||||||||| Sbjct: 39 gagaacaaccaccaccatcctag 61
>emb|AL591069.5| Human DNA sequence from clone RP11-72O9 on chromosome 6q25.2-26 Contains the 3' end of the SSLC22A3 gene for solute carrier family 22 (extraneuronal monoamine transporter), member 3 (extraneuronal monoamine transporter solute carrier family 22 (organic cation transporter), member 3(EMT, EMTh, OCT3)), the APOARGC gene for apolipoprotein (a) related gene C and a plasminogen (PLG) pseudogene, complete sequence Length = 162083 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 gagaacaaccaccaccatc 27 ||||||||||||||||||| Sbjct: 120812 gagaacaaccaccaccatc 120794
>dbj|AB074914.1| Fagopyrum esculentum LFY gene for leafy, partial cds Length = 2637 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatccta 30 ||||||||||||||||||| Sbjct: 53 aacaaccaccaccatccta 71
>dbj|AB074913.1| Fagopyrum cymosum LFY gene for leafy, partial cds, strain:C9914 Length = 2181 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatccta 30 ||||||||||||||||||| Sbjct: 53 aacaaccaccaccatccta 71
>dbj|AB074912.1| Fagopyrum cymosum LFY gene for leafy, partial cds, strain:C9911 Length = 2198 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatccta 30 ||||||||||||||||||| Sbjct: 53 aacaaccaccaccatccta 71
>dbj|AB074902.1| Fagopyrum tataricum LFY gene for leafy, partial cds Length = 2046 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatccta 30 ||||||||||||||||||| Sbjct: 53 aacaaccaccaccatccta 71
>emb|AJ535759.1|BOL535759 Bactrocera oleae mRNA for zinc finger transcription factor (ovoB gene), long splice variant Length = 4720 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatccta 30 ||||||||||||||||||| Sbjct: 2232 aacaaccaccaccatccta 2250
>emb|AJ535758.1|BOL535758 Bactrocera oleae mRNA for zinc finger transcription factor (ovoA gene), short splice variant Length = 4734 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatccta 30 ||||||||||||||||||| Sbjct: 2246 aacaaccaccaccatccta 2264
>emb|AJ535757.1|BOL535757 Bactrocera oleae ovoB gene for zinc finger transcription factor Length = 7222 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatccta 30 ||||||||||||||||||| Sbjct: 4067 aacaaccaccaccatccta 4085
>emb|AJ535756.1|BOL535756 Bactrocera oleae ovoA gene for zinc finger transcription factor Length = 7222 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatccta 30 ||||||||||||||||||| Sbjct: 4067 aacaaccaccaccatccta 4085
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 agaacaaccaccaccatcc 28 ||||||||||||||||||| Sbjct: 1281108 agaacaaccaccaccatcc 1281126
>ref|NM_104742.3| Arabidopsis thaliana polygalacturonase AT1G60590 mRNA, complete cds Length = 1982 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 tgagaacaaccaccacca 25 |||||||||||||||||| Sbjct: 283 tgagaacaaccaccacca 300
>ref|XM_631730.1| Dictyostelium discoideum hypothetical protein (DDB0191336), partial mRNA Length = 4632 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 2619 agaacaaccaccaccatc 2636
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 2274831 agaacaaccaccaccatc 2274814
>gb|AC114677.13| Mus musculus chromosome 18, clone RP24-213K19, complete sequence Length = 182311 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccaccat 26 |||||||||||||||||| Sbjct: 57003 gagaacaaccaccaccat 57020
>ref|XM_959170.1| Neurospora crassa OR74A hypothetical protein (NCU02768.1) partial mRNA Length = 5016 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcct 29 |||||||||||||||||| Sbjct: 4598 aacaaccaccaccatcct 4615
>ref|XM_329955.1| Neurospora crassa OR74A hypothetical protein (NCU02768.1) partial mRNA Length = 5016 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcct 29 |||||||||||||||||| Sbjct: 4598 aacaaccaccaccatcct 4615
>gb|AC146514.4| Pan troglodytes BAC clone CH251-103N3 from Y, complete sequence Length = 194348 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 165368 agaacaaccaccaccatc 165385
>gb|AC127300.3| Mus musculus BAC clone RP23-264J18 from chromosome 8, complete sequence Length = 178649 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 caaccaccaccatcctag 31 |||||||||||||||||| Sbjct: 171273 caaccaccaccatcctag 171290
>emb|AL358453.8| Human DNA sequence from clone RP11-115M14 on chromosome 1 Contains a cytochrome c oxidase subunit VIa polypeptide 1 (COX6A1) pseudogene, complete sequence Length = 108934 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 60573 agaacaaccaccaccatc 60556
>emb|AL157706.17| Human DNA sequence from clone RP11-153L18 on chromosome 10 Contains a gene for a novel protein (MGC11034) and a CpG island, complete sequence Length = 118616 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 gtgagaacaaccaccacc 24 |||||||||||||||||| Sbjct: 32934 gtgagaacaaccaccacc 32951
>emb|AL137855.10| Human DNA sequence from clone RP5-1064J9 on chromosome 1p32.2-33, complete sequence Length = 106970 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 caaccaccaccatcctag 31 |||||||||||||||||| Sbjct: 11328 caaccaccaccatcctag 11311
>gb|AC163451.2| Mus musculus chromosome 18, clone RP24-173G16, complete sequence Length = 146338 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccaccat 26 |||||||||||||||||| Sbjct: 117482 gagaacaaccaccaccat 117499
>gb|DQ122843.1| Medicago sativa alpha-glucosidase mRNA, partial cds Length = 649 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccaccat 26 |||||||||||||||||| Sbjct: 23 gagaacaaccaccaccat 40
>dbj|BS000629.2| Pan troglodytes chromosome Y clone: PTB-194O02, complete sequence Length = 184689 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 62799 agaacaaccaccaccatc 62816
>dbj|BS000552.1| Pan troglodytes chromosome Y clone:PTB-302F24, complete sequences Length = 157728 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 147295 agaacaaccaccaccatc 147278
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 18078902 agaacaaccaccaccatc 18078885
>gb|AC024192.6| Homo sapiens BAC clone RP11-476H13 from 4, complete sequence Length = 95481 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 tgagaacaaccaccacca 25 |||||||||||||||||| Sbjct: 25736 tgagaacaaccaccacca 25719
>gb|AY060568.1| Arabidopsis thaliana At1g60590/F8A5_12 mRNA, complete cds Length = 1760 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 tgagaacaaccaccacca 25 |||||||||||||||||| Sbjct: 131 tgagaacaaccaccacca 148
>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence Length = 120787 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 tgagaacaaccaccacca 25 |||||||||||||||||| Sbjct: 40678 tgagaacaaccaccacca 40661
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 aacaaccaccaccatcct 29 |||||||||||||||||| Sbjct: 1697121 aacaaccaccaccatcct 1697104
>emb|BX814728.1|CNS0AAT1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1816 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 tgagaacaaccaccacca 25 |||||||||||||||||| Sbjct: 283 tgagaacaaccaccacca 300
>gb|AC154289.1| Mus musculus BAC clone RP23-449E11 from chromosome 16, complete sequence Length = 191617 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 tgagaacaaccaccacca 25 |||||||||||||||||| Sbjct: 100864 tgagaacaaccaccacca 100847
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 aacaaccaccaccatcct 29 |||||||||||||||||| Sbjct: 15133 aacaaccaccaccatcct 15116
>dbj|BS000004.1| Pan troglodytes chromosome 22 clone:PTB-080D12, map 22, complete sequences Length = 86840 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 acaaccaccaccatccta 30 |||||||||||||||||| Sbjct: 63824 acaaccaccaccatccta 63807
>dbj|AK070887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064O22, full insert sequence Length = 1506 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcct 29 |||||||||||||||||| Sbjct: 25 aacaaccaccaccatcct 42
>gb|AC004474.1|AC004474 Homo sapiens chromosome Y, clone 475I1, complete sequence Length = 148280 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 117103 agaacaaccaccaccatc 117086
>gb|AC113951.13| Mus musculus chromosome 8, clone RP24-161A21, complete sequence Length = 166298 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 caaccaccaccatcctag 31 |||||||||||||||||| Sbjct: 32644 caaccaccaccatcctag 32661
>emb|AL672051.14| Mouse DNA sequence from clone RP23-332O3 on chromosome X, complete sequence Length = 163949 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 tgagaacaaccaccacca 25 |||||||||||||||||| Sbjct: 34259 tgagaacaaccaccacca 34276
>gb|AC087727.35| Mus musculus strain C57BL/6J chromosome 2 clone rp23-148b16, complete sequence Length = 202336 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 4 gccgtgagaacaaccaccacca 25 |||||||||||| ||||||||| Sbjct: 95450 gccgtgagaacagccaccacca 95471
>dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0355, complete sequence Length = 124602 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 83304 agaacaaccaccaccatc 83287
>dbj|AP004483.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13O04, TM0016, complete sequence Length = 122116 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 121443 agaacaaccaccaccatc 121426
>emb|AL772215.8| Mouse DNA sequence from clone RP23-114N20 on chromosome 2, complete sequence Length = 187537 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 4 gccgtgagaacaaccaccacca 25 |||||||||||| ||||||||| Sbjct: 159737 gccgtgagaacagccaccacca 159758
>dbj|AB018543.1| Dictyostelium discoideum mkpA gene, complete cds Length = 5467 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 agaacaaccaccaccatc 27 |||||||||||||||||| Sbjct: 2971 agaacaaccaccaccatc 2988
>dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-681B3, complete sequence Length = 182424 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 acaaccaccaccatccta 30 |||||||||||||||||| Sbjct: 107149 acaaccaccaccatccta 107166
>ref|NM_111967.3| Arabidopsis thaliana protein binding AT3G11330 mRNA, complete cds Length = 1924 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 11 gaacaaccaccaccatc 27 ||||||||||||||||| Sbjct: 180 gaacaaccaccaccatc 196
>ref|NM_121913.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT5G19080 mRNA, complete cds Length = 1516 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 101 aacaaccaccaccatcc 117
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01, complete sequence Length = 119525 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 13404 gagaacaaccaccacca 13388
>gb|AC166158.3| Mus musculus BAC clone RP24-244P14 from chromosome 1, complete sequence Length = 170234 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 64460 gagaacaaccaccacca 64476
>ref|NM_031442.2| Homo sapiens transmembrane protein 47 (TMEM47), mRNA Length = 4068 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 827 aacaaccaccaccatcc 843
>gb|AC101776.7| Mus musculus chromosome 7, clone RP24-118K20, complete sequence Length = 177972 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 11 gaacaaccaccaccatc 27 ||||||||||||||||| Sbjct: 79010 gaacaaccaccaccatc 78994
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 84132 gagaacaaccaccacca 84116
>gb|AC161050.2| Mus musculus BAC clone RP23-477C12 from chromosome 12, complete sequence Length = 197084 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 8835 aacaaccaccaccatcc 8851
>ref|XM_658588.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6076.2), mRNA Length = 7140 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 15 aaccaccaccatcctag 31 ||||||||||||||||| Sbjct: 348 aaccaccaccatcctag 332
>gb|AC134786.6| Mus musculus chromosome 15, clone RP24-502A14, complete sequence Length = 179157 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 2 tcgccgtgagaacaacc 18 ||||||||||||||||| Sbjct: 60310 tcgccgtgagaacaacc 60326
>gb|AC131178.11| Mus musculus chromosome 15, clone RP23-376I10, complete sequence Length = 170753 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 2 tcgccgtgagaacaacc 18 ||||||||||||||||| Sbjct: 128021 tcgccgtgagaacaacc 128005
>gb|AC102435.6| Mus musculus chromosome 12, clone RP24-123B22, complete sequence Length = 155483 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 16163 aacaaccaccaccatcc 16147
>gb|AC121595.3| Mus musculus BAC clone RP23-299A12 from chromosome X, complete sequence Length = 214297 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 10 agaacaaccaccaccatccta 30 |||||||||||||||| |||| Sbjct: 82616 agaacaaccaccaccacccta 82636
>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence Length = 211521 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 8 tgagaacaaccaccacc 24 ||||||||||||||||| Sbjct: 77444 tgagaacaaccaccacc 77428
>gb|BC046825.1| Mus musculus cDNA clone IMAGE:6400542, **** WARNING: chimeric clone **** Length = 3537 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 2424 gagaacaaccaccacca 2440
>gb|AC162303.4| Mus musculus chromosome 15, clone RP23-475N20, complete sequence Length = 181487 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 2 tcgccgtgagaacaacc 18 ||||||||||||||||| Sbjct: 156657 tcgccgtgagaacaacc 156673
>emb|AL596285.4| Human DNA sequence from clone RP11-330K13 on chromosome X Contains the gene for brain cell membrane protein 1 (BCMP1) and a CpG island, complete sequence Length = 110820 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 63936 aacaaccaccaccatcc 63920
>gb|AC133796.2| Homo sapiens 3 BAC RP11-10I2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125170 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 91409 aacaaccaccaccatcc 91425
>gb|AY122958.1| Arabidopsis thaliana unknown protein (At3g11330) mRNA, complete cds Length = 1531 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 11 gaacaaccaccaccatc 27 ||||||||||||||||| Sbjct: 112 gaacaaccaccaccatc 128
>gb|AY072078.1| Arabidopsis thaliana unknown protein (At3g11330) mRNA, complete cds Length = 1814 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 11 gaacaaccaccaccatc 27 ||||||||||||||||| Sbjct: 180 gaacaaccaccaccatc 196
>gb|BC039242.1| Homo sapiens transmembrane protein 47, mRNA (cDNA clone MGC:32949 IMAGE:5277761), complete cds Length = 4069 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 827 aacaaccaccaccatcc 843
>gb|AY849579.1| Arabidopsis thaliana plant intracellular Ras-group-related LRR protein 9 (PIRL9) mRNA, complete cds Length = 1500 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 11 gaacaaccaccaccatc 27 ||||||||||||||||| Sbjct: 112 gaacaaccaccaccatc 128
>gb|AY125510.1| Arabidopsis thaliana AT5g19080/T16G12_120 mRNA, complete cds Length = 1516 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 100 aacaaccaccaccatcc 116
>emb|AL136550.1|HSM801524 Homo sapiens mRNA; cDNA DKFZp761J17121 (from clone DKFZp761J17121) Length = 3803 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 577 aacaaccaccaccatcc 593
>emb|AL117650.1|HSM801187 Homo sapiens mRNA; cDNA DKFZp586A1124 (from clone DKFZp586A1124) Length = 2189 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 417 acaaccaccaccatcct 401
>gb|AC100827.2| Homo sapiens chromosome 15, clone RP11-1006G14, complete sequence Length = 141073 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 70146 acaaccaccaccatcct 70162
>dbj|AK090917.1| Homo sapiens cDNA FLJ33598 fis, clone BRAMY2013659 Length = 2021 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 292 aacaaccaccaccatcc 308
>gb|AC105185.5| Homo sapiens chromosome 8, clone RP11-1113C11, complete sequence Length = 152141 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 94474 gagaacaaccaccacca 94490
>gb|AC098649.2| Homo sapiens chromosome 3 clone RP11-272D20, complete sequence Length = 204143 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 9928 acaaccaccaccatcct 9912
>gb|AC113386.2| Homo sapiens chromosome 5 clone RP11-350H19, complete sequence Length = 109953 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 59539 gagaacaaccaccacca 59555
>gb|AC005925.1| Homo sapiens 12p13.3 PAC RPCI1-41B7 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 40446 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 32754 acaaccaccaccatcct 32770
>gb|U78045.1|HSU78045 Human collagenase and stromelysin genes, complete cds, and metalloelastase gene, partial cds Length = 81826 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 1589 gagaacaaccaccacca 1605
>gb|BT006357.1| Arabidopsis thaliana At5g19080/T16G12_120 gene, complete cds Length = 1137 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 40 aacaaccaccaccatcc 56
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 2550300 gagaacaaccaccacca 2550284
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 21964918 gagaacaaccaccacca 21964902
>emb|BX822908.1|CNS0A78Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1752 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 11 gaacaaccaccaccatc 27 ||||||||||||||||| Sbjct: 176 gaacaaccaccaccatc 192
>emb|BX823083.1|CNS0A4UM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1743 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 11 gaacaaccaccaccatc 27 ||||||||||||||||| Sbjct: 166 gaacaaccaccaccatc 182
>emb|BX830174.1|CNS09ZY5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB64ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1337 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 49 aacaaccaccaccatcc 65
>emb|BX842126.1|CNS09YBH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1729 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 11 gaacaaccaccaccatc 27 ||||||||||||||||| Sbjct: 167 gaacaaccaccaccatc 183
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 11 gaacaaccaccaccatc 27 ||||||||||||||||| Sbjct: 91750 gaacaaccaccaccatc 91734
>gb|AC068809.1|AC068809 Genomic Sequence For Arabidopsis thaliana Clone T16G12 From Chromosome V, complete sequence Length = 82411 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 45425 aacaaccaccaccatcc 45441
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 115280 gagaacaaccaccacca 115264
>emb|BX548056.3| Mouse DNA sequence from clone RP23-240D4 on chromosome X, complete sequence Length = 110099 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 10 agaacaaccaccaccatccta 30 |||||||||||||||| |||| Sbjct: 50749 agaacaaccaccaccacccta 50729
>emb|BX641117.1|HSM807020 Homo sapiens mRNA; cDNA DKFZp686O13120 (from clone DKFZp686O13120) Length = 3825 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 2045 acaaccaccaccatcct 2029
>dbj|AK000336.1| Homo sapiens cDNA FLJ20329 fis, clone HEP10185, highly similar to AJ009771 Homo sapiens mRNA for putative RING finger protein Length = 2995 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 1579 acaaccaccaccatcct 1563
>emb|BX510324.7| Zebrafish DNA sequence from clone DKEY-18C8 in linkage group 20, complete sequence Length = 164369 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 9072 aacaaccaccaccatcc 9056 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 8402 aacaaccaccaccatcc 8386 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 7933 aacaaccaccaccatcc 7917
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 8 tgagaacaaccaccacc 24 ||||||||||||||||| Sbjct: 50704 tgagaacaaccaccacc 50720
>gb|AC004527.2|AC004527 Homo sapiens chromosome 21, Neurofibromatosis 1 (NF1) related locus, complete sequence Length = 131971 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 115342 gagaacaaccaccacca 115326
>gb|AC102313.8| Mus musculus chromosome 1, clone RP24-435B20, complete sequence Length = 143900 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 50800 acaaccaccaccatcct 50784
>dbj|AP000647.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-75I23, complete sequence Length = 118818 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 88526 gagaacaaccaccacca 88542
>dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-42C6, complete sequence Length = 103181 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 39304 gagaacaaccaccacca 39320
>dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, section 4/105 Length = 340000 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 38966 gagaacaaccaccacca 38950
>emb|CT573096.4| RP43-083N14, complete sequence Length = 169666 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 69535 aacaaccaccaccatcc 69551
>emb|BX005347.5| Zebrafish DNA sequence from clone DKEY-199K9 in linkage group 17, complete sequence Length = 165991 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 59147 acaaccaccaccatcct 59163
>gb|AC174082.3| Mus musculus BAC clone RP23-395H10 from chromosome 13, complete sequence Length = 208596 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 17490 aacaaccaccaccatcc 17474
>emb|AL928867.9| Mouse DNA sequence from clone RP23-468L22 on chromosome 2, complete sequence Length = 111535 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 52359 acaaccaccaccatcct 52375
>emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on chromosome 2, complete sequence Length = 217148 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 91550 aacaaccaccaccatcc 91534
>gb|AC154851.3| Mus musculus BAC clone RP23-28P10 from chromosome 13, complete sequence Length = 234202 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 12 aacaaccaccaccatcc 28 ||||||||||||||||| Sbjct: 196368 aacaaccaccaccatcc 196352
>gb|DQ084455.1|DQ084454S2 Equus caballus myeloid differentiation primary response 88 (MYD88) gene, exons 4, 5 and partial cds Length = 501 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 101 acaaccaccaccatcct 85
>emb|AL391834.8| Human DNA sequence from clone RP11-513M16 on chromosome 9, complete sequence Length = 112713 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 66754 acaaccaccaccatcct 66770
>gb|AC164522.2| Mus musculus chromosome 1, clone RP23-148N9, complete sequence Length = 183664 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 138383 acaaccaccaccatcct 138367
>emb|AJ009771.1|HSA9771 Homo sapiens mRNA for putative RING finger protein, partial Length = 3038 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 13 acaaccaccaccatcct 29 ||||||||||||||||| Sbjct: 2293 acaaccaccaccatcct 2277
>gb|AC124528.4| Mus musculus BAC clone RP23-411B19 from chromosome 1, complete sequence Length = 195050 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 175566 gagaacaaccaccacca 175582
>dbj|AP001634.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:B585O4, D21S290-LL56 region, complete sequence Length = 71829 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 55200 gagaacaaccaccacca 55184
>emb|AL607123.22| Mouse DNA sequence from clone RP23-391E6 on chromosome 4, complete sequence Length = 149369 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 gagaacaaccaccacca 25 ||||||||||||||||| Sbjct: 97771 gagaacaaccaccacca 97787 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 275,525 Number of Sequences: 3902068 Number of extensions: 275525 Number of successful extensions: 89362 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89009 Number of HSP's gapped (non-prelim): 353 length of query: 31 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 11 effective length of database: 17,155,003,908 effective search space: 188705042988 effective search space used: 188705042988 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 17 (34.2 bits)