ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet56b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y14201.1|HVY14201 Hordeum vulgare mRNA for hypothetical prot... 396 e-107
2ref|NM_197125.1| Oryza sativa (japonica cultivar-group) putative... 121 9e-25
3gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 geno... 121 9e-25
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 121 9e-25
5dbj|AK100816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 9e-25
6dbj|AK059607.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 9e-25
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 121 9e-25
8ref|NM_197123.1| Oryza sativa (japonica cultivar-group) putative... 62 8e-07
9emb|Y14202.1|HVY14202 Hordeum vulgare mRNA for hypothetical prot... 54 2e-04
10gb|U32431.1|TAU32431 Triticum aestivum mRNA, clone WCI-5, comple... 48 0.011
11ref|XM_601516.2| PREDICTED: Bos taurus similar to keratin 5b (LO... 42 0.70
12emb|AL138741.13| Human DNA sequence from clone RP3-516D24 on chr... 42 0.70
13gb|AC093618.4| Homo sapiens BAC clone RP13-570B21 from 4, comple... 42 0.70
14gb|AC006287.1|AC006287 Homo sapiens, clone hRPK.22_A_1, complete... 42 0.70
15emb|X99395.1|MMENOGD M.musculus gene encoding endonuclease G 42 0.70
16ref|NM_001001534.1| Sus scrofa ryanodine receptor 1 (RYR1), mRNA 40 2.8
17gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 2.8
18ref|XM_582026.2| PREDICTED: Bos taurus similar to ryanodine rece... 40 2.8
19ref|NM_009419.2| Mus musculus protein-tyrosine sulfotransferase ... 40 2.8
20gb|BC003721.1| Mus musculus protein-tyrosine sulfotransferase 2,... 40 2.8
21ref|NM_000540.1| Homo sapiens ryanodine receptor 1 (skeletal) (R... 40 2.8
22emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 2.8
23gb|AC123848.4| Mus musculus BAC clone RP23-459I1 from chromosome... 40 2.8
24ref|NM_009109.1| Mus musculus ryanodine receptor 1, skeletal mus... 40 2.8
25gb|AC008133.7| Homo sapiens chromosome 17, clone RP11-40A13, com... 40 2.8
26dbj|AK150082.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 2.8
27dbj|AK149502.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 40 2.8
28dbj|AK149379.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 40 2.8
29dbj|AK163461.1| Mus musculus adult male corpora quadrigemina cDN... 40 2.8
30gb|AC025898.10| Homo sapiens chromosome 17, clone RP11-421O15, c... 40 2.8
31gb|AY268935.1| Mus musculus ryanodine receptor (Ryr1) mRNA, comp... 40 2.8
32dbj|AK036436.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 2.8
33gb|M91452.1|PIGRYRN Sus scrofa Yorkshire ryanodine receptor (RYR... 40 2.8
34gb|M91451.1|PIGRYRMH Sus scrofa Belgisch Landras/Pietrain ryanod... 40 2.8
35dbj|AK075672.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 2.8
36ref|XM_341818.2| PREDICTED: Rattus norvegicus ryanodine receptor... 40 2.8
37gb|DQ339154.1| Bacillus pumilus ribonuclease precursor, gene, co... 40 2.8
38gb|AF049890.1|AF049890 Mus musculus tyrosylprotein sulfotransfer... 40 2.8
39gb|AC151475.1| Mus musculus BAC clone RP23-283P1 from 5, complet... 40 2.8
40dbj|AB209425.1| Homo sapiens mRNA for ryanodine receptor 1 (skel... 40 2.8
41emb|X78666.1|MMBRYR1 M.musculus (BALB/c) Ryr1 mRNA 40 2.8
42gb|J05200.1|HUMRYR Human ryanodine receptor mRNA, complete cds 40 2.8
43emb|X62880.1|SSCRCRNA S.scrofa mRNA for calcium release channel ... 40 2.8 
>emb|Y14201.1|HVY14201 Hordeum vulgare mRNA for hypothetical protein, clone pBH6-12
          Length = 829

 Score =  396 bits (200), Expect = e-107
 Identities = 203/204 (99%)
 Strand = Plus / Plus

                                                                       
Query: 15  acgagatgaagatatccatcgcagcagccgctgtcctcctcctggccctggcagccacgg 74
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1   acgagatgaagatatccatcgcagcagccgctgtcctcctcctggccttggcagccacgg 60

                                                                       
Query: 75  ctagcgcggtcacgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgat 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctagcgcggtcacgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgat 120

                                                                       
Query: 135 tcgacagggagtacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttca 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgacagggagtacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttca 180

                                   
Query: 195 cctggggcatcttcaaccagccgg 218
           ||||||||||||||||||||||||
Sbjct: 181 cctggggcatcttcaaccagccgg 204
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>ref|NM_197125.1| Oryza sativa (japonica cultivar-group) putative basic secretory
           protein (OSJNBa0051D19.25), mRNA
          Length = 690

 Score =  121 bits (61), Expect = 9e-25
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 101 aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 160
           ||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||  |||
Sbjct: 91  aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 150

                                                                    
Query: 161 gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccg 217
           |||||||| |||||| | |  || ||||||||||||||| ||||||||| |||||||
Sbjct: 151 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccg 207
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>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
             sequence
          Length = 131984

 Score =  121 bits (61), Expect = 9e-25
 Identities = 103/117 (88%)
 Strand = Plus / Minus

                                                                         
Query: 101   aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 160
             ||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||  |||
Sbjct: 87802 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 87743

                                                                      
Query: 161   gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccg 217
             |||||||| |||||| | |  || ||||||||||||||| ||||||||| |||||||
Sbjct: 87742 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccg 87686



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 94/115 (81%)
 Strand = Plus / Plus

                                                                         
Query: 86    acgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgattcgacagggag 145
             |||||||| | |||||||  |||||||||||| |||||||| ||||| |||||| |||||
Sbjct: 92249 acgttcgatgcgacgaacacggcgtcgagcaccgccggcgggcagcggttcgaccgggag 92308

                                                                    
Query: 146   tacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttcacctggg 200
               |||||  | |||||| ||||| |||||| | || || || ||||||| |||||
Sbjct: 92309 gtcggcgtggactacgcgaagcaggtgctcgccgacgcgtcgtccttcatctggg 92363
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  121 bits (61), Expect = 9e-25
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                            
Query: 101      aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 160
                ||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||  |||
Sbjct: 18125326 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 18125385

                                                                         
Query: 161      gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccg 217
                |||||||| |||||| | |  || ||||||||||||||| ||||||||| |||||||
Sbjct: 18125386 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccg 18125442



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                            
Query: 86       acgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgattcgacagggag 145
                |||||||| | |||||||  |||||||||||| |||||||| ||||| |||||| |||||
Sbjct: 18120879 acgttcgatgcgacgaacacggcgtcgagcaccgccggcgggcagcggttcgaccgggag 18120820

                                                                       
Query: 146      tacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttcacctggg 200
                  |||||  | |||||| ||||| |||||| | || || || ||||||| |||||
Sbjct: 18120819 gtcggcgtggactacgcgaagcaggtgctcgccgacgcgtcgtccttcatctggg 18120765
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>dbj|AK100816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122C23, full
           insert sequence
          Length = 856

 Score =  121 bits (61), Expect = 9e-25
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 101 aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 160
           ||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||  |||
Sbjct: 111 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 170

                                                                    
Query: 161 gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccg 217
           |||||||| |||||| | |  || ||||||||||||||| ||||||||| |||||||
Sbjct: 171 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccg 227
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>dbj|AK059607.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F02, full
           insert sequence
          Length = 852

 Score =  121 bits (61), Expect = 9e-25
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 101 aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 160
           ||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||  |||
Sbjct: 107 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 166

                                                                    
Query: 161 gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccg 217
           |||||||| |||||| | |  || ||||||||||||||| ||||||||| |||||||
Sbjct: 167 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccg 223
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  121 bits (61), Expect = 9e-25
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                            
Query: 101      aacgaggcgtcgagcacagccggcggccagcgattcgacagggagtacggcgccgcctac 160
                ||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||  |||
Sbjct: 18134579 aacgaggcggcgagcaccgccggcggccagcggttcgaccgggagtacggcgccgggtac 18134638

                                                                         
Query: 161      gccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagccg 217
                |||||||| |||||| | |  || ||||||||||||||| ||||||||| |||||||
Sbjct: 18134639 gccaagcaggtgctcgccgccgcctcctccttcacctggagcatcttcagccagccg 18134695



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                            
Query: 86       acgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgattcgacagggag 145
                |||||||| | |||||||  |||||||||||| |||||||| ||||| |||||| |||||
Sbjct: 18130132 acgttcgatgcgacgaacacggcgtcgagcaccgccggcgggcagcggttcgaccgggag 18130073

                                                                       
Query: 146      tacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttcacctggg 200
                  |||||  | |||||| ||||| |||||| | || || || ||||||| |||||
Sbjct: 18130072 gtcggcgtggactacgcgaagcaggtgctcgccgacgcgtcgtccttcatctggg 18130018
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>ref|NM_197123.1| Oryza sativa (japonica cultivar-group) putative secretory protein
           (OSJNBa0051D19.13), mRNA
          Length = 702

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 94/115 (81%)
 Strand = Plus / Plus

                                                                       
Query: 86  acgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgattcgacagggag 145
           |||||||| | |||||||  |||||||||||| |||||||| ||||| |||||| |||||
Sbjct: 79  acgttcgatgcgacgaacacggcgtcgagcaccgccggcgggcagcggttcgaccgggag 138

                                                                  
Query: 146 tacggcgccgcctacgccaagcaagtgctctcggatgcttcctccttcacctggg 200
             |||||  | |||||| ||||| |||||| | || || || ||||||| |||||
Sbjct: 139 gtcggcgtggactacgcgaagcaggtgctcgccgacgcgtcgtccttcatctggg 193
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>emb|Y14202.1|HVY14202 Hordeum vulgare mRNA for hypothetical protein, clone pBH6-17
          Length = 859

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 86  acgttcgacgtgacgaacgaggcgtcgagcacagccggcggccagcgattcgaca 140
           |||||||||| | |||||  ||||||| |||| |||||||||||||| |||||||
Sbjct: 110 acgttcgacgcgtcgaacacggcgtcgggcaccgccggcggccagcgcttcgaca 164
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>gb|U32431.1|TAU32431 Triticum aestivum mRNA, clone WCI-5, complete cds
          Length = 862

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 157 ctacgccaagcaagtgctctcggatgcttcctccttcacctggggcatcttcaaccagcc 216
           |||||||||||| |||||||| || || || ||||||| ||||  || ||||||||||||
Sbjct: 159 ctacgccaagcaggtgctctccgaggcctcgtccttcatctggaccaccttcaaccagcc 218
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>ref|XM_601516.2| PREDICTED: Bos taurus similar to keratin 5b (LOC523221), mRNA
          Length = 1590

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 48  tcctcctcctggccctggcag 68
           |||||||||||||||||||||
Sbjct: 569 tcctcctcctggccctggcag 549
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>emb|AL138741.13| Human DNA sequence from clone RP3-516D24 on chromosome 6, complete
             sequence
          Length = 67372

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   cctccttcacctggggcatct 206
             |||||||||||||||||||||
Sbjct: 53555 cctccttcacctggggcatct 53575
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>gb|AC093618.4| Homo sapiens BAC clone RP13-570B21 from 4, complete sequence
          Length = 9788

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 184  ttcctccttcacctggggcat 204
            |||||||||||||||||||||
Sbjct: 1925 ttcctccttcacctggggcat 1905
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>gb|AC006287.1|AC006287 Homo sapiens, clone hRPK.22_A_1, complete sequence
          Length = 176153

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 184 ttcctccttcacctggggcat 204
           |||||||||||||||||||||
Sbjct: 76  ttcctccttcacctggggcat 96
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>emb|X99395.1|MMENOGD M.musculus gene encoding endonuclease G
          Length = 3525

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 34   cgcagcagccgctgtcctcct 54
            |||||||||||||||||||||
Sbjct: 2576 cgcagcagccgctgtcctcct 2556
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>ref|NM_001001534.1| Sus scrofa ryanodine receptor 1 (RYR1), mRNA
          Length = 15378

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctccttcacctggggcatct 206
             ||||||||||||||||||||
Sbjct: 12750 ctccttcacctggggcatct 12731
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     acagggagtacggcgccgcc 157
               ||||||||||||||||||||
Sbjct: 2906611 acagggagtacggcgccgcc 2906592
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>ref|XM_582026.2| PREDICTED: Bos taurus similar to ryanodine receptor 1, skeletal
            muscle (LOC505697), mRNA
          Length = 9500

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  ctccttcacctggggcatct 206
            ||||||||||||||||||||
Sbjct: 6882 ctccttcacctggggcatct 6863
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>ref|NM_009419.2| Mus musculus protein-tyrosine sulfotransferase 2 (Tpst2), mRNA
          Length = 1829

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gagcacagccggcggccagc 131
           ||||||||||||||||||||
Sbjct: 247 gagcacagccggcggccagc 228
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>gb|BC003721.1| Mus musculus protein-tyrosine sulfotransferase 2, mRNA (cDNA clone
           MGC:5752 IMAGE:3494892), complete cds
          Length = 1829

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gagcacagccggcggccagc 131
           ||||||||||||||||||||
Sbjct: 247 gagcacagccggcggccagc 228
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>ref|NM_000540.1| Homo sapiens ryanodine receptor 1 (skeletal) (RYR1), mRNA
          Length = 15359

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctccttcacctggggcatct 206
             ||||||||||||||||||||
Sbjct: 12763 ctccttcacctggggcatct 12744
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>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             10/14
          Length = 307550

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   acagggagtacggcgccgcc 157
             ||||||||||||||||||||
Sbjct: 60415 acagggagtacggcgccgcc 60396
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>gb|AC123848.4| Mus musculus BAC clone RP23-459I1 from chromosome 5, complete sequence
          Length = 184292

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    gagcacagccggcggccagc 131
              ||||||||||||||||||||
Sbjct: 107087 gagcacagccggcggccagc 107106
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>ref|NM_009109.1| Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA
          Length = 15358

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctccttcacctggggcatct 206
             ||||||||||||||||||||
Sbjct: 12781 ctccttcacctggggcatct 12762
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>gb|AC008133.7| Homo sapiens chromosome 17, clone RP11-40A13, complete sequence
          Length = 179744

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     cctcctggccctggcagcca 71
              ||||||||||||||||||||
Sbjct: 145807 cctcctggccctggcagcca 145788
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>dbj|AK150082.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530127A14
           product:protein-tyrosine sulfotransferase 2, full insert
           sequence
          Length = 1767

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gagcacagccggcggccagc 131
           ||||||||||||||||||||
Sbjct: 219 gagcacagccggcggccagc 200
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>dbj|AK149502.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730026M21
           product:protein-tyrosine sulfotransferase 2, full insert
           sequence
          Length = 1778

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gagcacagccggcggccagc 131
           ||||||||||||||||||||
Sbjct: 219 gagcacagccggcggccagc 200
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>dbj|AK149379.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730003F03
           product:protein-tyrosine sulfotransferase 2, full insert
           sequence
          Length = 1608

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gagcacagccggcggccagc 131
           ||||||||||||||||||||
Sbjct: 260 gagcacagccggcggccagc 241
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>dbj|AK163461.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230119D01
           product:protein-tyrosine sulfotransferase 2, full insert
           sequence
          Length = 1716

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gagcacagccggcggccagc 131
           ||||||||||||||||||||
Sbjct: 220 gagcacagccggcggccagc 201
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>gb|AC025898.10| Homo sapiens chromosome 17, clone RP11-421O15, complete sequence
          Length = 184875

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    cctcctggccctggcagcca 71
             ||||||||||||||||||||
Sbjct: 46967 cctcctggccctggcagcca 46948
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>gb|AY268935.1| Mus musculus ryanodine receptor (Ryr1) mRNA, complete cds
          Length = 15358

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctccttcacctggggcatct 206
             ||||||||||||||||||||
Sbjct: 12781 ctccttcacctggggcatct 12762
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>dbj|AK036436.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
           library, clone:9830107O18 product:protein-tyrosine
           sulfotransferase 2, full insert sequence
          Length = 1742

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gagcacagccggcggccagc 131
           ||||||||||||||||||||
Sbjct: 185 gagcacagccggcggccagc 166
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>gb|M91452.1|PIGRYRN Sus scrofa Yorkshire ryanodine receptor (RYR1) mRNA, complete cds
          Length = 15378

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctccttcacctggggcatct 206
             ||||||||||||||||||||
Sbjct: 12750 ctccttcacctggggcatct 12731
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>gb|M91451.1|PIGRYRMH Sus scrofa Belgisch Landras/Pietrain ryanodine receptor (RYR1) mRNA,
             complete cds
          Length = 15378

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctccttcacctggggcatct 206
             ||||||||||||||||||||
Sbjct: 12750 ctccttcacctggggcatct 12731
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>dbj|AK075672.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110062A05
           product:protein-tyrosine sulfotransferase 2, full insert
           sequence
          Length = 1812

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gagcacagccggcggccagc 131
           ||||||||||||||||||||
Sbjct: 256 gagcacagccggcggccagc 237
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>ref|XM_341818.2| PREDICTED: Rattus norvegicus ryanodine receptor 1, skeletal muscle
            (Ryr1), mRNA
          Length = 3621

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  ctccttcacctggggcatct 206
            ||||||||||||||||||||
Sbjct: 1043 ctccttcacctggggcatct 1024
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>gb|DQ339154.1| Bacillus pumilus ribonuclease precursor, gene, complete cds
          Length = 622

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 caagcaagtgctctcggatg 182
           ||||||||||||||||||||
Sbjct: 374 caagcaagtgctctcggatg 393
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>gb|AF049890.1|AF049890 Mus musculus tyrosylprotein sulfotransferase-2 mRNA, complete cds
          Length = 1760

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gagcacagccggcggccagc 131
           ||||||||||||||||||||
Sbjct: 202 gagcacagccggcggccagc 183
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>gb|AC151475.1| Mus musculus BAC clone RP23-283P1 from 5, complete sequence
          Length = 171663

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    gagcacagccggcggccagc 131
              ||||||||||||||||||||
Sbjct: 167089 gagcacagccggcggccagc 167108
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>dbj|AB209425.1| Homo sapiens mRNA for ryanodine receptor 1 (skeletal) variant protein
          Length = 6266

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  ctccttcacctggggcatct 206
            ||||||||||||||||||||
Sbjct: 6005 ctccttcacctggggcatct 5986
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>emb|X78666.1|MMBRYR1 M.musculus (BALB/c) Ryr1 mRNA
          Length = 620

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ctccttcacctggggcatct 206
           ||||||||||||||||||||
Sbjct: 316 ctccttcacctggggcatct 297
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>gb|J05200.1|HUMRYR Human ryanodine receptor mRNA, complete cds
          Length = 15346

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctccttcacctggggcatct 206
             ||||||||||||||||||||
Sbjct: 12720 ctccttcacctggggcatct 12701
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>emb|X62880.1|SSCRCRNA S.scrofa mRNA for calcium release channel (CRC)
          Length = 15253

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctccttcacctggggcatct 206
             ||||||||||||||||||||
Sbjct: 12618 ctccttcacctggggcatct 12599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,690,766
Number of Sequences: 3902068
Number of extensions: 1690766
Number of successful extensions: 137789
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137515
Number of HSP's gapped (non-prelim): 274
length of query: 218
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 196
effective length of database: 17,147,199,772
effective search space: 3360851155312
effective search space used: 3360851155312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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