| Clone Name | baet53g08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 149 bits (75), Expect = 2e-33 Identities = 75/75 (100%) Strand = Plus / Plus Query: 24 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 83 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 60 Query: 84 ggggcgtcggtgctt 98 ||||||||||||||| Sbjct: 61 ggggcgtcggtgctt 75
>ref|XM_479512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1304 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 232 ggctcgcatgggggcgtcgctgct 255
>ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1291 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 234 ggctcgcatgggggcgtcgctgct 257
>ref|XM_758500.1| Theileria parva strain Muguga chromosome 3 replication factor C large subunit (TP03_0565) partial mRNA Length = 3656 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 actcacacaaacacaagttt 20 |||||||||||||||||||| Sbjct: 2457 actcacacaaacacaagttt 2476
>emb|X66125.1|OSPER O.sativa mRNA for peroxidase Length = 1287 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 183 ggctcgcatgggggcgtcgctgct 206
>emb|BX276114.6| Zebrafish DNA sequence from clone CH211-176L11 in linkage group 20 Contains the kit gene for kit receptor, the 3' end of the pdgfra gene for platelet derived growth factor receptor alpha and a CpG island, complete sequence Length = 134212 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tcacacaaacacaagtttcc 22 |||||||||||||||||||| Sbjct: 4921 tcacacaaacacaagtttcc 4902
>gb|AC182754.1| Gasterosteus aculeatus clone VMRC28-42C14, complete sequence Length = 138028 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcacacaaacacaagtttc 21 |||||||||||||||||||| Sbjct: 26149 ctcacacaaacacaagtttc 26130
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 28620405 ggctcgcatgggggcgtcgctgct 28620428
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 86363 ggctcgcatgggggcgtcgctgct 86386
>dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F01, full insert sequence Length = 1287 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K12, full insert sequence Length = 1290 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 233 ggctcgcatgggggcgtcgctgct 256
>dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C17, full insert sequence Length = 1303 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 231 ggctcgcatgggggcgtcgctgct 254
>tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx111 gene for class III peroxidase 111 precursor, exons 1-4 Length = 1250 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 162 ggctcgcatgggggcgtcgctgct 185
>gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, complete cds Length = 1306 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggctcgcatgggggcgtcggtgct 97 ||||||||||||||||||| |||| Sbjct: 205 ggctcgcatgggggcgtcgctgct 228
>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete sequence Length = 192913 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ccatccagcattctcagacc 40 |||||||||||||||||||| Sbjct: 68495 ccatccagcattctcagacc 68514
>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence Length = 219361 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ccatccagcattctcagacc 40 |||||||||||||||||||| Sbjct: 56171 ccatccagcattctcagacc 56190
>ref|XM_528809.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 4921515A04 (LOC473438), mRNA Length = 2931 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 1002 tctcagaccgagtgagcct 1020
>ref|XM_528789.1| PREDICTED: Pan troglodytes LOC473418 (LOC473418), mRNA Length = 2202 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 492 tctcagaccgagtgagcct 510
>gb|AF401203.1| Homo sapiens chAB4 multisequence family and NF1-related multisequence family regions Length = 86723 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 83115 tctcagaccgagtgagcct 83133
>gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chromosome 2, complete sequence Length = 139973 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 32761 tctcagaccgagtgagcct 32779
>ref|XM_422713.1| PREDICTED: Gallus gallus similar to RIKEN cDNA C630015F21 gene (LOC424902), mRNA Length = 2086 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 cacaagtttccatccagca 30 ||||||||||||||||||| Sbjct: 332 cacaagtttccatccagca 350
>gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromosome 2, complete sequence Length = 211457 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 93643 tctcagaccgagtgagcct 93625
>gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, complete sequence Length = 191237 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 20294 tctcagaccgagtgagcct 20276
>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete sequence Length = 179528 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 110300 tctcagaccgagtgagcct 110318
>gb|AC183918.1| Homo sapiens BAC clone RP11-170N9 from chromosome unknown, complete sequence Length = 151064 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 90195 tctcagaccgagtgagcct 90213
>gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0024E08, complete sequence Length = 131946 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 tccagcattctcagaccga 42 ||||||||||||||||||| Sbjct: 98131 tccagcattctcagaccga 98149
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 gcattctcagaccgagtga 46 ||||||||||||||||||| Sbjct: 4051644 gcattctcagaccgagtga 4051662
>gb|BC036580.1| Homo sapiens chromosome 21 open reading frame 81, mRNA (cDNA clone IMAGE:4793793), with apparent retained intron Length = 2574 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 309 tctcagaccgagtgagcct 291
>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete sequence Length = 192494 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 191209 tctcagaccgagtgagcct 191191
>gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map 17, complete sequence Length = 143758 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccatccagcattctcagac 39 ||||||||||||||||||| Sbjct: 84278 ccatccagcattctcagac 84296
>gb|BC063278.1| Homo sapiens cDNA clone IMAGE:4798734, partial cds Length = 2567 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 304 tctcagaccgagtgagcct 286
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 38.2 bits (19), Expect = 4.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 71 catggctcgcatgggggcgtcggtgct 97 |||||||||||||| || ||||||||| Sbjct: 123 catggctcgcatggcggtgtcggtgct 149
>gb|BC022023.1| Homo sapiens similar to ankyrin repeat domain 20A, mRNA (cDNA clone MGC:26718 IMAGE:4824658), complete cds Length = 2088 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 50 tctcagaccgagtgagcct 32
>gb|AY861214.1| Cottus gobio microsatellite Cott328 sequence Length = 502 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 cacacaaacacaagtttcc 22 ||||||||||||||||||| Sbjct: 416 cacacaaacacaagtttcc 434
>emb|BX511126.10| Zebrafish DNA sequence from clone CH211-244A17 in linkage group 9, complete sequence Length = 156247 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 cacacaaacacaagtttcc 22 ||||||||||||||||||| Sbjct: 154226 cacacaaacacaagtttcc 154208
>emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chromosome 9 Contains three novel pseudogenes, the gene for a novel protein similar to ankyrin repeat domain 20A (ANKRD20A), the gene for a novel protein similar to Ankyrin repeat domain protein 18A (LOC441424), a pseudogene similar to part of cytochrome P450 family protein, a novel zinc finger pseudogene and a CpG island, complete sequence Length = 161157 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 107687 tctcagaccgagtgagcct 107705
>emb|CR848007.6| Human DNA sequence from clone RP11-115C9 on chromosome 9 Contains a calponin 2 (CNN2) pseudogene, a novel zinc finger pseudogene, a pseudogene similar to part of cytochrome P450, subfamily IVF, a chromosome 2 open reading frame 14 (C2orf14) pseudogene, a pseudogene similar to part of sorting nexin associated golgi protein 1 (SNAG1), a melanoma antigen (LOC51152) pseudogene, four novel pseudogenes and an ankyrin repeat domain 20A (ANKRD20A) pseudogene, complete sequence Length = 149891 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 122112 tctcagaccgagtgagcct 122130
>emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on chromosome 9 Contains three novel pseudogenes, a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene similar to part of G protein-coupled receptor 116 (GPR116), two novel genes, the 5' end of a novel gene similar to ankyrin repeat domain 20A (ANKRD20A) and three CpG islands, complete sequence Length = 165886 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 153912 tctcagaccgagtgagcct 153894
>emb|BX649567.3| Human DNA sequence from clone RP11-195B21 on chromosome 9 Contains a novel pseudogene, the gene for a novel protein similar to ankyrin repeat domain 20A (ANKRD20A), a novel gene and a CpG island, complete sequence Length = 99502 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 38140 tctcagaccgagtgagcct 38122
>emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on chromosome 9 Contains a pseudogene similar to part of sorting nexin associated golgi protein 1 (SNAG1), the ANKRD20A gene for ankyrin repeat domain 20A, five novel genes, a pseudogene similar to part of eprin A, alpha (PABA peptide hydrolase) (MEP1A) and a CpG island, complete sequence Length = 180498 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 100469 tctcagaccgagtgagcct 100487
>emb|AL442127.7| Human DNA sequence from clone RP11-297I6 on chromosome 13 Contains two novel genes, the 5' end of the EFNB2 gene for ephrin-B2 (HTKL EPLG5 LERK5), an ATP synthase H+ transporting mitochondrial F0 complex subunit c pseudogene and two CpG islands, complete sequence Length = 210115 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 actcacacaaacacaagtt 19 ||||||||||||||||||| Sbjct: 77261 actcacacaaacacaagtt 77243
>gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 map 17, complete sequence Length = 202803 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccatccagcattctcagac 39 ||||||||||||||||||| Sbjct: 62451 ccatccagcattctcagac 62469
>emb|AL355498.10| Human DNA sequence from clone RP11-112L15 on chromosome 6 Contains a heparan sulfate (glucosamine) 3-O-sulfotransferase 1 (HS3ST1) pseudogene, a putative novel gene, a laminin receptor 1 (LAMR1) pseudogene and two putative novel genes, complete sequence Length = 165549 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 actcacacaaacacaagtt 19 ||||||||||||||||||| Sbjct: 149474 actcacacaaacacaagtt 149492
>ref|NM_001029999.1| Homo sapiens similar to ankyrin repeat domain 20A (MGC26718), mRNA Length = 2088 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 50 tctcagaccgagtgagcct 32
>gb|BC043199.1| Homo sapiens cDNA clone MGC:44241 IMAGE:5289033, complete cds Length = 2572 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 309 tctcagaccgagtgagcct 291
>emb|CR847883.10| Zebrafish DNA sequence from clone DKEYP-24H10 in linkage group 1, complete sequence Length = 83811 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ctcacacaaacacaagttt 20 ||||||||||||||||||| Sbjct: 57945 ctcacacaaacacaagttt 57927
>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a pseudogene similar to part of a novel protein (DKFZp434A171), a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene similar to part of a novel transmembrane receptor protein and two novel pseudogenes, complete sequence Length = 189495 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 6087 tctcagaccgagtgagcct 6105
>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete sequence Length = 158069 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 56786 tctcagaccgagtgagcct 56804
>emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chromosome 21, complete sequence Length = 152296 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 44098 tctcagaccgagtgagcct 44080
>gb|AF426257.1| Homo sapiens C21orf81 protein (C21orf81) mRNA, complete cds Length = 1102 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 309 tctcagaccgagtgagcct 291
>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome Length = 190289 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 cacacaaacacaagtttcc 22 ||||||||||||||||||| Sbjct: 73705 cacacaaacacaagtttcc 73687
>ref|NM_153750.1| Homo sapiens chromosome 21 open reading frame 81 (C21orf81), mRNA Length = 1102 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 309 tctcagaccgagtgagcct 291
>ref|XM_932240.1| PREDICTED: Homo sapiens hypothetical protein LOC644558 (LOC644558), mRNA Length = 831 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 762 tctcagaccgagtgagcct 744
>ref|XM_928873.1| PREDICTED: Homo sapiens similar to ankyrin repeat domain 20 family, member A2, transcript variant 1 (LOC392331), mRNA Length = 4125 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 39 tctcagaccgagtgagcct 21
>ref|XM_938860.1| PREDICTED: Homo sapiens similar to ankyrin repeat domain 20 family, member A2, transcript variant 1 (LOC648303), mRNA Length = 4122 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 39 tctcagaccgagtgagcct 21
>ref|XM_371535.3| PREDICTED: Homo sapiens ankyrin repeat domain 20B, transcript variant 1 (ANKRD20B), mRNA Length = 4122 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 39 tctcagaccgagtgagcct 21
>gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, complete sequence Length = 214530 Score = 38.2 bits (19), Expect = 4.3 Identities = 28/31 (90%) Strand = Plus / Plus Query: 8 caaacacaagtttccatccagcattctcaga 38 ||||| |||||| || ||||||||||||||| Sbjct: 47212 caaacccaagttcccctccagcattctcaga 47242
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 tccagcattctcagaccga 42 ||||||||||||||||||| Sbjct: 26074564 tccagcattctcagaccga 26074582
>gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete sequence Length = 127075 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 30119 tctcagaccgagtgagcct 30137
>emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chromosome 22, complete sequence Length = 219376 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 160431 tctcagaccgagtgagcct 160413
>dbj|BS000149.1| Pan troglodytes chromosome 22 clone:PTB-407O15, map 22, complete sequences Length = 50768 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 16871 tctcagaccgagtgagcct 16853
>dbj|BS000006.1| Pan troglodytes chromosome 22 clone:PTB-274F15, map 22, complete sequences Length = 118294 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 40213 tctcagaccgagtgagcct 40195
>dbj|BS000004.1| Pan troglodytes chromosome 22 clone:PTB-080D12, map 22, complete sequences Length = 86840 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 54056 tctcagaccgagtgagcct 54074
>emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chromosome 22, complete sequence Length = 161147 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 58349 tctcagaccgagtgagcct 58331
>emb|AJ271163.1|MCO271163 Molluscum contagiosum virus subtype 1 054L gene for interleukin 18 binding protein, isolate Madrid 99 Length = 657 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 cacacaaacacaagtttcc 22 ||||||||||||||||||| Sbjct: 260 cacacaaacacaagtttcc 278
>emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004 Length = 340000 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 338686 tctcagaccgagtgagcct 338704
>gb|AC004527.2|AC004527 Homo sapiens chromosome 21, Neurofibromatosis 1 (NF1) related locus, complete sequence Length = 131971 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 76059 tctcagaccgagtgagcct 76077
>dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, section 4/105 Length = 340000 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 83628 tctcagaccgagtgagcct 83610
>gb|AC114578.14| Mus musculus chromosome 19, clone RP23-162C4, complete sequence Length = 201229 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 ctcacacaaacacaagttt 20 ||||||||||||||||||| Sbjct: 63757 ctcacacaaacacaagttt 63775
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 tccagcattctcagaccga 42 ||||||||||||||||||| Sbjct: 26393260 tccagcattctcagaccga 26393278
>dbj|AP001347.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:R73I15, q-centromere region, complete sequence Length = 134926 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 28891 tctcagaccgagtgagcct 28873
>dbj|AP001634.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:B585O4, D21S290-LL56 region, complete sequence Length = 71829 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 15920 tctcagaccgagtgagcct 15938
>dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-681B3, complete sequence Length = 182424 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 116836 tctcagaccgagtgagcct 116818
>emb|AL355973.21| Human DNA sequence from clone RP4-660N4 on chromosome 1, complete sequence Length = 110898 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tctcagaccgagtgagcct 50 ||||||||||||||||||| Sbjct: 100273 tctcagaccgagtgagcct 100291 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 741,347 Number of Sequences: 3902068 Number of extensions: 741347 Number of successful extensions: 53577 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53447 Number of HSP's gapped (non-prelim): 130 length of query: 98 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 77 effective length of database: 17,151,101,840 effective search space: 1320634841680 effective search space used: 1320634841680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)