ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet53g08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransgly... 149 2e-33
2ref|XM_479512.1| Oryza sativa (japonica cultivar-group), mRNA 40 1.1
3ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 1.1
4ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 1.1
5ref|XM_758500.1| Theileria parva strain Muguga chromosome 3 repl... 40 1.1
6emb|X66125.1|OSPER O.sativa mRNA for peroxidase 40 1.1
7emb|BX276114.6| Zebrafish DNA sequence from clone CH211-176L11 i... 40 1.1
8gb|AC182754.1| Gasterosteus aculeatus clone VMRC28-42C14, comple... 40 1.1
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.1
10dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.1
11dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.1
12dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.1
13dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.1
14tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 1.1
15gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, c... 40 1.1
16emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on ch... 40 1.1
17gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosom... 40 1.1
18ref|XM_528809.1| PREDICTED: Pan troglodytes similar to RIKEN cDN... 38 4.3
19ref|XM_528789.1| PREDICTED: Pan troglodytes LOC473418 (LOC473418... 38 4.3
20gb|AF401203.1| Homo sapiens chAB4 multisequence family and NF1-r... 38 4.3
21gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chrom... 38 4.3
22ref|XM_422713.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 38 4.3
23gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromo... 38 4.3
24gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, comp... 38 4.3
25gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromo... 38 4.3
26gb|AC183918.1| Homo sapiens BAC clone RP11-170N9 from chromosome... 38 4.3
27gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome... 38 4.3
28gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 38 4.3
29gb|BC036580.1| Homo sapiens chromosome 21 open reading frame 81,... 38 4.3
30gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromo... 38 4.3
31gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map... 38 4.3
32gb|BC063278.1| Homo sapiens cDNA clone IMAGE:4798734, partial cds 38 4.3
33emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein 38 4.3
34gb|BC022023.1| Homo sapiens similar to ankyrin repeat domain 20A... 38 4.3
35gb|AY861214.1| Cottus gobio microsatellite Cott328 sequence 38 4.3
36emb|BX511126.10| Zebrafish DNA sequence from clone CH211-244A17 ... 38 4.3
37emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chr... 38 4.3
38emb|CR848007.6| Human DNA sequence from clone RP11-115C9 on chro... 38 4.3
39emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on ch... 38 4.3
40emb|BX649567.3| Human DNA sequence from clone RP11-195B21 on chr... 38 4.3
41emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on ch... 38 4.3
42emb|AL442127.7| Human DNA sequence from clone RP11-297I6 on chro... 38 4.3
43gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 m... 38 4.3
44emb|AL355498.10| Human DNA sequence from clone RP11-112L15 on ch... 38 4.3
45ref|NM_001029999.1| Homo sapiens similar to ankyrin repeat domai... 38 4.3
46gb|BC043199.1| Homo sapiens cDNA clone MGC:44241 IMAGE:5289033, ... 38 4.3
47emb|CR847883.10| Zebrafish DNA sequence from clone DKEYP-24H10 i... 38 4.3
48emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chro... 38 4.3
49emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chro... 38 4.3
50emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chr... 38 4.3
51gb|AF426257.1| Homo sapiens C21orf81 protein (C21orf81) mRNA, co... 38 4.3
52gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, comp... 38 4.3
53ref|NM_153750.1| Homo sapiens chromosome 21 open reading frame 8... 38 4.3
54ref|XM_932240.1| PREDICTED: Homo sapiens hypothetical protein LO... 38 4.3
55ref|XM_928873.1| PREDICTED: Homo sapiens similar to ankyrin repe... 38 4.3
56ref|XM_938860.1| PREDICTED: Homo sapiens similar to ankyrin repe... 38 4.3
57ref|XM_371535.3| PREDICTED: Homo sapiens ankyrin repeat domain 2... 38 4.3
58gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, comp... 38 4.3
59dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.3
60gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete... 38 4.3
61emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chr... 38 4.3
62dbj|BS000149.1| Pan troglodytes chromosome 22 clone:PTB-407O15, ... 38 4.3
63dbj|BS000006.1| Pan troglodytes chromosome 22 clone:PTB-274F15, ... 38 4.3
64dbj|BS000004.1| Pan troglodytes chromosome 22 clone:PTB-080D12, ... 38 4.3
65emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chr... 38 4.3
66emb|AJ271163.1|MCO271163 Molluscum contagiosum virus subtype 1 0... 38 4.3
67emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004 38 4.3
68gb|AC004527.2|AC004527 Homo sapiens chromosome 21, Neurofibromat... 38 4.3
69dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 4.3
70gb|AC114578.14| Mus musculus chromosome 19, clone RP23-162C4, co... 38 4.3
71gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 4.3
72dbj|AP001347.1| Homo sapiens genomic DNA, chromosome 21q11.1 clo... 38 4.3
73dbj|AP001634.1| Homo sapiens genomic DNA, chromosome 21q11.1 clo... 38 4.3
74dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 38 4.3
75emb|AL355973.21| Human DNA sequence from clone RP4-660N4 on chro... 38 4.3

>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
          (XEA)
          Length = 1174

 Score =  149 bits (75), Expect = 2e-33
 Identities = 75/75 (100%)
 Strand = Plus / Plus

                                                                      
Query: 24 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 83
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 60

                         
Query: 84 ggggcgtcggtgctt 98
          |||||||||||||||
Sbjct: 61 ggggcgtcggtgctt 75



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>ref|XM_479512.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1287

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 230 ggctcgcatgggggcgtcgctgct 253



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>ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113
           mRNA
          Length = 1304

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 232 ggctcgcatgggggcgtcgctgct 255



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>ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113
           mRNA
          Length = 1291

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 234 ggctcgcatgggggcgtcgctgct 257



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>ref|XM_758500.1| Theileria parva strain Muguga chromosome 3 replication factor C large
            subunit (TP03_0565) partial mRNA
          Length = 3656

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    actcacacaaacacaagttt 20
            ||||||||||||||||||||
Sbjct: 2457 actcacacaaacacaagttt 2476



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>emb|X66125.1|OSPER O.sativa mRNA for peroxidase
          Length = 1287

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 183 ggctcgcatgggggcgtcgctgct 206



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>emb|BX276114.6| Zebrafish DNA sequence from clone CH211-176L11 in linkage group 20
            Contains the kit gene for kit receptor, the 3' end of the
            pdgfra gene for platelet derived growth factor receptor
            alpha and a CpG island, complete sequence
          Length = 134212

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    tcacacaaacacaagtttcc 22
            ||||||||||||||||||||
Sbjct: 4921 tcacacaaacacaagtttcc 4902



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>gb|AC182754.1| Gasterosteus aculeatus clone VMRC28-42C14, complete sequence
          Length = 138028

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     ctcacacaaacacaagtttc 21
             ||||||||||||||||||||
Sbjct: 26149 ctcacacaaacacaagtttc 26130



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 74       ggctcgcatgggggcgtcggtgct 97
                ||||||||||||||||||| ||||
Sbjct: 28620405 ggctcgcatgggggcgtcgctgct 28620428



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>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1167_G06
          Length = 112386

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    ggctcgcatgggggcgtcggtgct 97
             ||||||||||||||||||| ||||
Sbjct: 86363 ggctcgcatgggggcgtcgctgct 86386



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>dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F01, full
           insert sequence
          Length = 1287

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 230 ggctcgcatgggggcgtcgctgct 253



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>dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K12, full
           insert sequence
          Length = 1290

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 233 ggctcgcatgggggcgtcgctgct 256



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>dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C17, full
           insert sequence
          Length = 1303

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 231 ggctcgcatgggggcgtcgctgct 254



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>tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx111 gene
           for class III peroxidase 111 precursor, exons 1-4
          Length = 1250

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 162 ggctcgcatgggggcgtcgctgct 185



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>gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, complete cds
          Length = 1306

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ggctcgcatgggggcgtcggtgct 97
           ||||||||||||||||||| ||||
Sbjct: 205 ggctcgcatgggggcgtcgctgct 228



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>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete
             sequence
          Length = 192913

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ccatccagcattctcagacc 40
             ||||||||||||||||||||
Sbjct: 68495 ccatccagcattctcagacc 68514



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>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence
          Length = 219361

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ccatccagcattctcagacc 40
             ||||||||||||||||||||
Sbjct: 56171 ccatccagcattctcagacc 56190



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>ref|XM_528809.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 4921515A04
            (LOC473438), mRNA
          Length = 2931

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 32   tctcagaccgagtgagcct 50
            |||||||||||||||||||
Sbjct: 1002 tctcagaccgagtgagcct 1020



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>ref|XM_528789.1| PREDICTED: Pan troglodytes LOC473418 (LOC473418), mRNA
          Length = 2202

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 32  tctcagaccgagtgagcct 50
           |||||||||||||||||||
Sbjct: 492 tctcagaccgagtgagcct 510



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>gb|AF401203.1| Homo sapiens chAB4 multisequence family and NF1-related multisequence
             family regions
          Length = 86723

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 83115 tctcagaccgagtgagcct 83133



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>gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chromosome 2, complete
             sequence
          Length = 139973

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 32761 tctcagaccgagtgagcct 32779



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>ref|XM_422713.1| PREDICTED: Gallus gallus similar to RIKEN cDNA C630015F21 gene
           (LOC424902), mRNA
          Length = 2086

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 12  cacaagtttccatccagca 30
           |||||||||||||||||||
Sbjct: 332 cacaagtttccatccagca 350



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>gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromosome 2, complete
             sequence
          Length = 211457

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 93643 tctcagaccgagtgagcct 93625



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>gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, complete sequence
          Length = 191237

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 20294 tctcagaccgagtgagcct 20276



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>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete
              sequence
          Length = 179528

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     tctcagaccgagtgagcct 50
              |||||||||||||||||||
Sbjct: 110300 tctcagaccgagtgagcct 110318



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>gb|AC183918.1| Homo sapiens BAC clone RP11-170N9 from chromosome unknown, complete
             sequence
          Length = 151064

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 90195 tctcagaccgagtgagcct 90213



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>gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0024E08, complete sequence
          Length = 131946

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    tccagcattctcagaccga 42
             |||||||||||||||||||
Sbjct: 98131 tccagcattctcagaccga 98149



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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 28      gcattctcagaccgagtga 46
               |||||||||||||||||||
Sbjct: 4051644 gcattctcagaccgagtga 4051662



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>gb|BC036580.1| Homo sapiens chromosome 21 open reading frame 81, mRNA (cDNA clone
           IMAGE:4793793), with apparent retained intron
          Length = 2574

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 32  tctcagaccgagtgagcct 50
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291



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>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete
              sequence
          Length = 192494

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     tctcagaccgagtgagcct 50
              |||||||||||||||||||
Sbjct: 191209 tctcagaccgagtgagcct 191191



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>gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map 17, complete sequence
          Length = 143758

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    ccatccagcattctcagac 39
             |||||||||||||||||||
Sbjct: 84278 ccatccagcattctcagac 84296



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>gb|BC063278.1| Homo sapiens cDNA clone IMAGE:4798734, partial cds
          Length = 2567

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 32  tctcagaccgagtgagcct 50
           |||||||||||||||||||
Sbjct: 304 tctcagaccgagtgagcct 286



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>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein
          Length = 1187

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 71  catggctcgcatgggggcgtcggtgct 97
           |||||||||||||| || |||||||||
Sbjct: 123 catggctcgcatggcggtgtcggtgct 149



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>gb|BC022023.1| Homo sapiens similar to ankyrin repeat domain 20A, mRNA (cDNA
          clone MGC:26718 IMAGE:4824658), complete cds
          Length = 2088

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 32 tctcagaccgagtgagcct 50
          |||||||||||||||||||
Sbjct: 50 tctcagaccgagtgagcct 32



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>gb|AY861214.1| Cottus gobio microsatellite Cott328 sequence
          Length = 502

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 4   cacacaaacacaagtttcc 22
           |||||||||||||||||||
Sbjct: 416 cacacaaacacaagtttcc 434



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>emb|BX511126.10| Zebrafish DNA sequence from clone CH211-244A17 in linkage group 9,
              complete sequence
          Length = 156247

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      cacacaaacacaagtttcc 22
              |||||||||||||||||||
Sbjct: 154226 cacacaaacacaagtttcc 154208



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>emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chromosome 9 Contains three
              novel pseudogenes, the gene for a novel protein similar to
              ankyrin repeat domain 20A (ANKRD20A), the gene for a  novel
              protein similar to Ankyrin repeat domain protein 18A
              (LOC441424), a pseudogene similar to part of cytochrome
              P450 family protein, a novel zinc finger pseudogene and a
              CpG island, complete sequence
          Length = 161157

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     tctcagaccgagtgagcct 50
              |||||||||||||||||||
Sbjct: 107687 tctcagaccgagtgagcct 107705



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>emb|CR848007.6| Human DNA sequence from clone RP11-115C9 on chromosome 9 Contains a
              calponin 2 (CNN2) pseudogene, a novel zinc finger
              pseudogene, a pseudogene similar to part of cytochrome
              P450, subfamily IVF, a chromosome 2 open reading frame 14
              (C2orf14) pseudogene, a pseudogene similar to part of
              sorting nexin associated golgi protein 1 (SNAG1), a
              melanoma antigen (LOC51152) pseudogene, four novel
              pseudogenes and an ankyrin repeat domain 20A (ANKRD20A)
              pseudogene, complete sequence
          Length = 149891

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     tctcagaccgagtgagcct 50
              |||||||||||||||||||
Sbjct: 122112 tctcagaccgagtgagcct 122130



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>emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on chromosome 9 Contains three
              novel pseudogenes, a pseudogene similar to part of meprin
              A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
              similar to part of G protein-coupled receptor 116 (GPR116),
              two novel genes, the 5' end of a novel gene similar to
              ankyrin repeat domain 20A (ANKRD20A) and three CpG islands,
              complete sequence
          Length = 165886

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     tctcagaccgagtgagcct 50
              |||||||||||||||||||
Sbjct: 153912 tctcagaccgagtgagcct 153894



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>emb|BX649567.3| Human DNA sequence from clone RP11-195B21 on chromosome 9 Contains a
             novel pseudogene, the gene for a novel protein similar to
             ankyrin repeat domain 20A (ANKRD20A), a novel gene and a
             CpG island, complete sequence
          Length = 99502

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 38140 tctcagaccgagtgagcct 38122



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>emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on chromosome 9 Contains a
              pseudogene similar to part of sorting nexin associated
              golgi protein 1 (SNAG1), the ANKRD20A gene for ankyrin
              repeat domain 20A, five novel genes, a pseudogene similar
              to part of eprin A, alpha (PABA peptide hydrolase) (MEP1A)
              and a CpG island, complete sequence
          Length = 180498

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     tctcagaccgagtgagcct 50
              |||||||||||||||||||
Sbjct: 100469 tctcagaccgagtgagcct 100487



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>emb|AL442127.7| Human DNA sequence from clone RP11-297I6 on chromosome 13 Contains two
             novel genes, the 5' end of the EFNB2 gene for ephrin-B2
             (HTKL EPLG5 LERK5), an ATP synthase H+ transporting
             mitochondrial F0 complex subunit c pseudogene and two CpG
             islands, complete sequence
          Length = 210115

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     actcacacaaacacaagtt 19
             |||||||||||||||||||
Sbjct: 77261 actcacacaaacacaagtt 77243



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>gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 map 17, complete
             sequence
          Length = 202803

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    ccatccagcattctcagac 39
             |||||||||||||||||||
Sbjct: 62451 ccatccagcattctcagac 62469



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>emb|AL355498.10| Human DNA sequence from clone RP11-112L15 on chromosome 6 Contains a
              heparan sulfate (glucosamine) 3-O-sulfotransferase 1
              (HS3ST1) pseudogene, a putative novel gene, a laminin
              receptor  1 (LAMR1) pseudogene and two putative novel
              genes, complete sequence
          Length = 165549

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      actcacacaaacacaagtt 19
              |||||||||||||||||||
Sbjct: 149474 actcacacaaacacaagtt 149492



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>ref|NM_001029999.1| Homo sapiens similar to ankyrin repeat domain 20A (MGC26718),
          mRNA
          Length = 2088

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 32 tctcagaccgagtgagcct 50
          |||||||||||||||||||
Sbjct: 50 tctcagaccgagtgagcct 32



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>gb|BC043199.1| Homo sapiens cDNA clone MGC:44241 IMAGE:5289033, complete cds
          Length = 2572

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 32  tctcagaccgagtgagcct 50
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291



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>emb|CR847883.10| Zebrafish DNA sequence from clone DKEYP-24H10 in linkage group 1,
             complete sequence
          Length = 83811

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     ctcacacaaacacaagttt 20
             |||||||||||||||||||
Sbjct: 57945 ctcacacaaacacaagttt 57927



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>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a
            pseudogene similar to part of a novel protein
            (DKFZp434A171), a pseudogene similar to part of meprin A,
            alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
            similar to part of a novel transmembrane receptor protein
            and two novel pseudogenes, complete sequence
          Length = 189495

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 32   tctcagaccgagtgagcct 50
            |||||||||||||||||||
Sbjct: 6087 tctcagaccgagtgagcct 6105



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>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete
             sequence
          Length = 158069

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 56786 tctcagaccgagtgagcct 56804



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>emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chromosome 21, complete
             sequence
          Length = 152296

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 44098 tctcagaccgagtgagcct 44080



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>gb|AF426257.1| Homo sapiens C21orf81 protein (C21orf81) mRNA, complete cds
          Length = 1102

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 32  tctcagaccgagtgagcct 50
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291



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>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome
          Length = 190289

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     cacacaaacacaagtttcc 22
             |||||||||||||||||||
Sbjct: 73705 cacacaaacacaagtttcc 73687



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>ref|NM_153750.1| Homo sapiens chromosome 21 open reading frame 81 (C21orf81), mRNA
          Length = 1102

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 32  tctcagaccgagtgagcct 50
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291



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>ref|XM_932240.1| PREDICTED: Homo sapiens hypothetical protein LOC644558 (LOC644558),
           mRNA
          Length = 831

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 32  tctcagaccgagtgagcct 50
           |||||||||||||||||||
Sbjct: 762 tctcagaccgagtgagcct 744



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>ref|XM_928873.1| PREDICTED: Homo sapiens similar to ankyrin repeat domain 20
          family, member A2, transcript variant 1 (LOC392331),
          mRNA
          Length = 4125

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 32 tctcagaccgagtgagcct 50
          |||||||||||||||||||
Sbjct: 39 tctcagaccgagtgagcct 21



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>ref|XM_938860.1| PREDICTED: Homo sapiens similar to ankyrin repeat domain 20
          family, member A2, transcript variant 1 (LOC648303),
          mRNA
          Length = 4122

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 32 tctcagaccgagtgagcct 50
          |||||||||||||||||||
Sbjct: 39 tctcagaccgagtgagcct 21



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>ref|XM_371535.3| PREDICTED: Homo sapiens ankyrin repeat domain 20B, transcript
          variant 1 (ANKRD20B), mRNA
          Length = 4122

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 32 tctcagaccgagtgagcct 50
          |||||||||||||||||||
Sbjct: 39 tctcagaccgagtgagcct 21



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>gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, complete sequence
          Length = 214530

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 8     caaacacaagtttccatccagcattctcaga 38
             ||||| |||||| || |||||||||||||||
Sbjct: 47212 caaacccaagttcccctccagcattctcaga 47242



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 24       tccagcattctcagaccga 42
                |||||||||||||||||||
Sbjct: 26074564 tccagcattctcagaccga 26074582



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>gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete sequence
          Length = 127075

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 30119 tctcagaccgagtgagcct 30137



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>emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chromosome 22, complete
              sequence
          Length = 219376

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     tctcagaccgagtgagcct 50
              |||||||||||||||||||
Sbjct: 160431 tctcagaccgagtgagcct 160413



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>dbj|BS000149.1| Pan troglodytes chromosome 22 clone:PTB-407O15, map 22, complete
             sequences
          Length = 50768

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 16871 tctcagaccgagtgagcct 16853



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>dbj|BS000006.1| Pan troglodytes chromosome 22 clone:PTB-274F15, map 22, complete
             sequences
          Length = 118294

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 40213 tctcagaccgagtgagcct 40195



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>dbj|BS000004.1| Pan troglodytes chromosome 22 clone:PTB-080D12, map 22, complete
             sequences
          Length = 86840

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 54056 tctcagaccgagtgagcct 54074



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>emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chromosome 22, complete
             sequence
          Length = 161147

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 58349 tctcagaccgagtgagcct 58331



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>emb|AJ271163.1|MCO271163 Molluscum contagiosum virus subtype 1 054L gene for interleukin 18
           binding protein, isolate Madrid 99
          Length = 657

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 4   cacacaaacacaagtttcc 22
           |||||||||||||||||||
Sbjct: 260 cacacaaacacaagtttcc 278



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>emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004
          Length = 340000

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     tctcagaccgagtgagcct 50
              |||||||||||||||||||
Sbjct: 338686 tctcagaccgagtgagcct 338704



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>gb|AC004527.2|AC004527 Homo sapiens chromosome 21, Neurofibromatosis 1 (NF1) related locus,
             complete sequence
          Length = 131971

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 76059 tctcagaccgagtgagcct 76077



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>dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, section 4/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 83628 tctcagaccgagtgagcct 83610



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>gb|AC114578.14| Mus musculus chromosome 19, clone RP23-162C4, complete sequence
          Length = 201229

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     ctcacacaaacacaagttt 20
             |||||||||||||||||||
Sbjct: 63757 ctcacacaaacacaagttt 63775



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 24       tccagcattctcagaccga 42
                |||||||||||||||||||
Sbjct: 26393260 tccagcattctcagaccga 26393278



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>dbj|AP001347.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:R73I15, q-centromere
             region, complete sequence
          Length = 134926

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 28891 tctcagaccgagtgagcct 28873



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>dbj|AP001634.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:B585O4, D21S290-LL56
             region, complete sequence
          Length = 71829

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    tctcagaccgagtgagcct 50
             |||||||||||||||||||
Sbjct: 15920 tctcagaccgagtgagcct 15938



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>dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-681B3, complete
              sequence
          Length = 182424

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     tctcagaccgagtgagcct 50
              |||||||||||||||||||
Sbjct: 116836 tctcagaccgagtgagcct 116818



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>emb|AL355973.21| Human DNA sequence from clone RP4-660N4 on chromosome 1, complete
              sequence
          Length = 110898

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     tctcagaccgagtgagcct 50
              |||||||||||||||||||
Sbjct: 100273 tctcagaccgagtgagcct 100291


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 741,347
Number of Sequences: 3902068
Number of extensions: 741347
Number of successful extensions: 53577
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53447
Number of HSP's gapped (non-prelim): 130
length of query: 98
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 77
effective length of database: 17,151,101,840
effective search space: 1320634841680
effective search space used: 1320634841680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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