>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem
          II
          Length = 1217

 Score =  107 bits (54), Expect = 5e-21
 Identities = 67/70 (95%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                      
Query: 22 tcccgcgtaccaagcccaccgaccaacatggcagcgtctctccaagccgcggccacgctg 81
          |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 2  tcccgcgtaccaagcc-accgaccaacatggcagcgtctctccaagccgcggccaccgtg 60

                    
Query: 82 atgccggcca 91
          ||||||||||
Sbjct: 61 atgccggcca 70

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 47       acatggcagcgtctctccaagccgcggccacgctgatgc 85
                |||||||||| || ||||||||||||||||| |||||||
Sbjct: 17345518 acatggcagcatcgctccaagccgcggccaccctgatgc 17345556

>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1080D07
          Length = 173856

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 47     acatggcagcgtctctccaagccgcggccacgctgatgc 85
              |||||||||| || ||||||||||||||||| |||||||
Sbjct: 111779 acatggcagcatcgctccaagccgcggccaccctgatgc 111817

>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full
           insert sequence
          Length = 1286

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 47  acatggcagcgtctctccaagccgcggccacgctgatgc 85
           |||||||||| || ||||||||||||||||| |||||||
Sbjct: 64  acatggcagcatcgctccaagccgcggccaccctgatgc 102

>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full
           insert sequence
          Length = 1217

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 47  acatggcagcgtctctccaagccgcggccacgctgatgc 85
           |||||||||| || ||||||||||||||||| |||||||
Sbjct: 71  acatggcagcatcgctccaagccgcggccaccctgatgc 109

>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full
           insert sequence
          Length = 1293

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 47  acatggcagcgtctctccaagccgcggccacgctgatgc 85
           |||||||||| || ||||||||||||||||| |||||||
Sbjct: 72  acatggcagcatcgctccaagccgcggccaccctgatgc 110

>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full
           insert sequence
          Length = 1292

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 47  acatggcagcgtctctccaagccgcggccacgctgatgc 85
           |||||||||| || ||||||||||||||||| |||||||
Sbjct: 68  acatggcagcatcgctccaagccgcggccaccctgatgc 106

>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02,
          full insert sequence
          Length = 1272

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc 85
          |||||||||| || ||||||||||||||||| |||||||
Sbjct: 48 acatggcagcatcgctccaagccgcggccaccctgatgc 86

>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06,
          full insert sequence
          Length = 1159

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc 85
          |||||||||| || ||||||||||||||||| |||||||
Sbjct: 48 acatggcagcatcgctccaagccgcggccaccctgatgc 86

>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full
           insert sequence
          Length = 1290

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 47  acatggcagcgtctctccaagccgcggccacgctgatgc 85
           |||||||||| || ||||||||||||||||| |||||||
Sbjct: 68  acatggcagcatcgctccaagccgcggccaccctgatgc 106

>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04,
          full insert sequence
          Length = 1313

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc 85
          |||||||||| || ||||||||||||||||| |||||||
Sbjct: 51 acatggcagcatcgctccaagccgcggccaccctgatgc 89

>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full
           insert sequence
          Length = 1332

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 47  acatggcagcgtctctccaagccgcggccacgctgatgc 85
           |||||||||| || ||||||||||||||||| |||||||
Sbjct: 73  acatggcagcatcgctccaagccgcggccaccctgatgc 111

>dbj|AK062941.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-B10, full
           insert sequence
          Length = 620

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 47  acatggcagcgtctctccaagccgcggccacgctgatgc 85
           |||||||||| || ||||||||||||||||| |||||||
Sbjct: 63  acatggcagcatcgctccaagccgcggccaccctgatgc 101

>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full
           insert sequence
          Length = 1208

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 47  acatggcagcgtctctccaagccgcggccacgctgatgc 85
           |||||||||| || ||||||||||||||||| |||||||
Sbjct: 68  acatggcagcatcgctccaagccgcggccaccctgatgc 106

>ref|NM_193698.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1002

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 49 atggcagcgtctctccaagccgcggccacgctgatgc 85
          |||||||| || ||||||||||||||||| |||||||
Sbjct: 1  atggcagcatcgctccaagccgcggccaccctgatgc 37

>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23,
             complete sequence
          Length = 149353

 Score = 42.1 bits (21), Expect = 0.25
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 46    aacatggcagcgtctctccaagccgcggc 74
             |||||||  ||||||||||||||||||||
Sbjct: 69559 aacatggacgcgtctctccaagccgcggc 69587

>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence
          Length = 181577

 Score = 42.1 bits (21), Expect = 0.25
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 46    aacatggcagcgtctctccaagccgcggc 74
             |||||||  ||||||||||||||||||||
Sbjct: 69753 aacatggacgcgtctctccaagccgcggc 69781

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 0.25
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 46       aacatggcagcgtctctccaagccgcggc 74
                |||||||  ||||||||||||||||||||
Sbjct: 33638499 aacatggacgcgtctctccaagccgcggc 33638527

>dbj|AK111108.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A04, full
           insert sequence
          Length = 826

 Score = 42.1 bits (21), Expect = 0.25
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 46  aacatggcagcgtctctccaagccgcggc 74
           |||||||  ||||||||||||||||||||
Sbjct: 496 aacatggacgcgtctctccaagccgcggc 468

>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence
          Length = 1460

 Score = 42.1 bits (21), Expect = 0.25
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 49  atggcagcgtctctccaagccgcggccacgctgatgc 85
           |||||||| || ||||||||||||| ||| |||||||
Sbjct: 335 atggcagcctcgctccaagccgcgggcaccctgatgc 371

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 69      cgcggccacgctgatgccg 87
               |||||||||||||||||||
Sbjct: 3227976 cgcggccacgctgatgccg 3227958

>gb|AC007249.5| Homo sapiens BAC clone RP11-320M2 from 2, complete sequence
          Length = 200491

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 63     ccaagccgcggccacgctg 81
              |||||||||||||||||||
Sbjct: 191035 ccaagccgcggccacgctg 191053

>dbj|AK067553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108L03, full
           insert sequence
          Length = 2629

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  cgcggccacgctgatgccg 87
           |||||||||||||||||||
Sbjct: 222 cgcggccacgctgatgccg 240

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 69      cgcggccacgctgatgccg 87
               |||||||||||||||||||
Sbjct: 3227921 cgcggccacgctgatgccg 3227903

>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109081

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    cgcggccacgctgatgccg 87
             |||||||||||||||||||
Sbjct: 18362 cgcggccacgctgatgccg 18344


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 508,904
Number of Sequences: 3902068
Number of extensions: 508904
Number of successful extensions: 26237
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26181
Number of HSP's gapped (non-prelim): 55
length of query: 91
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 70
effective length of database: 17,151,101,840
effective search space: 1200577128800
effective search space used: 1200577128800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)