ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet53d05 |
|---|---|
| Clone Library Name | barley_pub |
>ADRB1_FELCA (Q9TST6) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 474 Score = 35.0 bits (79), Expect = 0.072 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = +2 Query: 176 LRPGRGLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAA 310 LR R + + + R+ ++GPA PP A APG PR ++TAA Sbjct: 245 LRVFREAQKQVKKIDSCERRFLSGPARPPSPAPAPGSPRPAATAA 289
>P100_HCMVA (P08318) Large structural phosphoprotein (pp150) (150 kDa matrix| phosphoprotein) (Basic phosphoprotein) (BPP) (Tegument protein UL32) Length = 1048 Score = 34.3 bits (77), Expect = 0.12 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = +2 Query: 185 GRGLRAGIH--RPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAA 310 GRG R G+ +P + V P P+S APGR GSS AA Sbjct: 892 GRGSRVGVPSLKPTLGGKAVVGRPPSVPVSGSAPGRLSGSSRAA 935
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 34.3 bits (77), Expect = 0.12 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPG 283 GLR G P P K AGP PP +AG PG Sbjct: 693 GLRGGAGPPGPEGGKGAAGPPGPPGAAGTPG 723
>BRSK1_HUMAN (Q8TDC3) BR serine/threonine-protein kinase 1 (EC 2.7.11.1) (SAD1| kinase) (SAD1A) Length = 794 Score = 33.5 bits (75), Expect = 0.21 Identities = 24/55 (43%), Positives = 26/55 (47%), Gaps = 10/55 (18%) Frame = +2 Query: 182 PGRGLR---AGIHRPPPSARKT-VAGPAEPPLSAGAP------GRPRGSSTAAPG 316 P RG R AG PPPSAR T + GP P S+G PR S T PG Sbjct: 495 PSRGPRGGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPG 549
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 32.7 bits (73), Expect = 0.36 Identities = 16/31 (51%), Positives = 16/31 (51%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPG 283 G R G P P K AGP PP SAG PG Sbjct: 537 GPRGGAGPPGPEGGKGAAGPPGPPGSAGTPG 567
>PDE8A_HUMAN (O60658) High-affinity cAMP-specific and IBMX-insensitive| 3',5'-cyclic phosphodiesterase 8A (EC 3.1.4.17) Length = 829 Score = 32.7 bits (73), Expect = 0.36 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAA 310 G IH + PA PPLS+G P P+G TAA Sbjct: 2 GCAPSIHISERLVAEDAPSPAAPPLSSGGPRLPQGQKTAA 41
>VGLL2_MOUSE (Q8BGW8) Transcription cofactor vestigial-like protein 2 (Vgl-2)| (VITO1 protein) Length = 322 Score = 32.3 bits (72), Expect = 0.47 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +2 Query: 200 AGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 A RP A + P PP A G P GS+ AAPG Sbjct: 243 AATGRPGRLAPASAPAPGSPPCELAAKGEPAGSAWAAPG 281
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 32.0 bits (71), Expect = 0.61 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +2 Query: 203 GIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 G+ P PS R GP PP G PG G PG Sbjct: 400 GVSLPGPSGRDGAPGPPGPPGPPGQPGHTNGIVECQPG 437
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 32.0 bits (71), Expect = 0.61 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 12/85 (14%) Frame = +3 Query: 108 GSNGQERSHLHLLQ------------APRRRRRAFSALAVAFVPESTDRLLPRGRPSPAL 251 G G+ R H H +PRRRRR+ S + PR R SP+L Sbjct: 510 GEVGRRRRHSHSRSPSPSPRKRQKEPSPRRRRRSPSPPPARRRRSPSPPPPPRRRRSPSL 569 Query: 252 QNRRCRQGPRGGREAHPRRHRGNVQ 326 RR P R PRR+ +Q Sbjct: 570 PRRRSPSPPPRRRSPSPRRYSPPIQ 594 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAP 313 PPP+ R+ P PP +P PR S + P Sbjct: 546 PPPARRRRSPSPPPPPRRRRSPSLPRRRSPSPP 578
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 32.0 bits (71), Expect = 0.61 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPG 283 GLR G P P K AGP PP ++G PG Sbjct: 692 GLRGGAGPPGPEGGKGPAGPPGPPGTSGPPG 722
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 31.6 bits (70), Expect = 0.80 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +2 Query: 206 IHRPPPSARKTVAGPAEPPLSA--GAPGRPRGSSTAAPG 316 + RPPP A P PP ++ GAP PR T+ G Sbjct: 758 VRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYG 796
>CSKI2_HUMAN (Q8WXE0) Caskin-2| Length = 1202 Score = 31.2 bits (69), Expect = 1.0 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +2 Query: 188 RGLRAGIHRPPPSARKTVAGPA-EPPLSAGAPGRPRGSS 301 R R G PPP +V+GP+ EPP G+PG G++ Sbjct: 862 RARRKGPPPPPPKRLSSVSGPSPEPPPLDGSPGPKEGAT 900
>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (FAP-A) Length = 381 Score = 31.2 bits (69), Expect = 1.0 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 PPP+ GP P + GAPG P + AAPG Sbjct: 303 PPPAPPAAPGGPGAP--APGAPGAPAPGAPAAPG 334
>SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor| Length = 2213 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/26 (65%), Positives = 17/26 (65%) Frame = +2 Query: 221 PSARKTVAGPAEPPLSAGAPGRPRGS 298 PSA G AEPP AG PGRPRGS Sbjct: 7 PSAAGGGGGGAEPPERAG-PGRPRGS 31
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 30.8 bits (68), Expect = 1.4 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +2 Query: 182 PGRGLRAGIHRPPPSAR-KTVAGPAEPPLSAGAPGRPRGSSTAAP 313 P RG G P P+AR +T A PA+P A AP R +S A+P Sbjct: 200 PARGDPVG--EPGPAARPRTPAPPAQPAAVAAAPARRGPASPASP 242
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 30.8 bits (68), Expect = 1.4 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +2 Query: 182 PGRGLRAGIHRPPPSAR-KTVAGPAEPPLSAGAPGRPRGSSTAAP 313 P RG G P P+AR +T A PA+P A AP R +S A+P Sbjct: 192 PARGDPVG--EPGPAARPRTPAPPAQPAAVAAAPARRGPASPASP 234
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 30.8 bits (68), Expect = 1.4 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPG 283 G R G P P K AGP PP ++G+PG Sbjct: 692 GARGGAGPPGPEGGKGPAGPPGPPGASGSPG 722
>RS5_LEIXX (Q6AD11) 30S ribosomal protein S5| Length = 232 Score = 30.8 bits (68), Expect = 1.4 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +3 Query: 204 ESTDRLLPRGRPSPALQNRRCRQGPRGGREAHPRRHRGN 320 E T+ P + NR R+ RGGRE +P R RGN Sbjct: 4 EVTETAQPVETAASTDNNREQREPRRGGRERNPNRDRGN 42
>NKX12_MOUSE (P42580) NK1 transcription factor-related protein 2 (Homeobox| protein SAX-1) (NKX-1.1) Length = 305 Score = 30.4 bits (67), Expect = 1.8 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 5/45 (11%) Frame = +2 Query: 203 GIHRPPPSARKTVAGPAEP-----PLSAGAPGRPRGSSTAAPGKC 322 G+H P AR G E P S G+PG PR A C Sbjct: 109 GVHEGSPEARAVAVGTEESGAEGLPASPGSPGSPRPRRRRAESSC 153
>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2| Length = 902 Score = 30.4 bits (67), Expect = 1.8 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +2 Query: 212 RPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 +P +AR A PA P GAP G++T PG Sbjct: 177 QPASAARPATAAPAAPAPRPGAPAARPGTTTTRPG 211
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/33 (48%), Positives = 16/33 (48%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 GL I P P R AGPA PP G PG P Sbjct: 719 GLPGPIGPPGPRGRTGDAGPAGPPGPPGPPGPP 751
>COL40_CAEEL (P34804) Cuticle collagen 40| Length = 306 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 200 AGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 AG P P+ AGP P +AGAPG P APG Sbjct: 253 AGASEPGPAGPAGDAGPDGAPGNAGAPGAP--GEAGAPG 289
>GRASP_HUMAN (Q7Z6J2) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) Length = 395 Score = 30.0 bits (66), Expect = 2.3 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPGKC 322 PPP AR GPAE P PG S +A +C Sbjct: 301 PPPPARAFGPGPAETPAVGPGPGPRAALSRSASVRC 336
>UGGG2_HUMAN (Q9NYU1) UDP-glucose:glycoprotein glucosyltransferase 2 precursor (EC| 2.4.1.-) (UDP-glucose ceramide glucosyltransferase-like 1) (UDP--Glc:glycoprotein glucosyltransferase 2) (HUGT2) Length = 1516 Score = 30.0 bits (66), Expect = 2.3 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +1 Query: 325 KTVNSVYQLDYISADGSCFDDEEEE 399 KTV + Y+L+Y+ +G CFD E+ Sbjct: 1079 KTVTAEYELEYLLLEGQCFDKVTEQ 1103
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.6 bits (65), Expect = 3.0 Identities = 20/47 (42%), Positives = 22/47 (46%) Frame = +3 Query: 147 QAPRRRRRAFSALAVAFVPESTDRLLPRGRPSPALQNRRCRQGPRGG 287 + PR RRR P TDR+ PRG PSP R CR R G Sbjct: 1626 RGPRPRRR----------PGLTDRVPPRGGPSP----RGCRGAGRAG 1658
>AIPL1_HUMAN (Q9NZN9) Aryl-hydrocarbon-interacting protein-like 1| Length = 384 Score = 29.6 bits (65), Expect = 3.0 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Frame = +2 Query: 176 LRPGRGLRAGIHRPP------PSARKTVAGPAEPP------LSAGAPGRPRGSSTAAPG 316 LR L G +PP P A+ + PAEPP LSAG P P +PG Sbjct: 321 LRCRNMLSQGATQPPAEPPTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPG 379
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 29.6 bits (65), Expect = 3.0 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +2 Query: 182 PGRGLRAGIHRPPPSARKTVAGPAEPPLSAGAP---GRPRGSSTAA-PG 316 PG AG P + AGP PP +AGAP G P G TA PG Sbjct: 226 PGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGPGTAGKPG 274
>XRCC1_RAT (Q9ESZ0) DNA-repair protein XRCC1 (X-ray repair cross-complementing| protein 1) Length = 631 Score = 29.6 bits (65), Expect = 3.0 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 Query: 218 PPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 P +R A PA P PG+PRG T G Sbjct: 276 PVPSRTPAATPASTPAQKAVPGKPRGEGTEPRG 308 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +2 Query: 212 RPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 RP P A+ AGP+ PP P P + +PG Sbjct: 432 RPQPKAKTQAAGPSSPP----RPPTPEETKAPSPG 462
>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) (Protein G3) Length = 1132 Score = 24.3 bits (51), Expect(2) = 3.8 Identities = 12/37 (32%), Positives = 14/37 (37%) Frame = +1 Query: 106 GVPMGKKGLTSIFSKLPAGADEPSPPWPWPSCRNPQT 216 GVP +G+T P PP P P QT Sbjct: 638 GVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQT 674 Score = 23.5 bits (49), Expect(2) = 3.8 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPG 283 PP ++T+ P P AG+PG Sbjct: 667 PPAPEQQTMPPPGSPSGGAGSPG 689
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +2 Query: 188 RGLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAP 313 RG R PPP+ R+ PA PP P P T +P Sbjct: 543 RGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSP 584
>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding| protein M) (RanBPM) (BPM90) (BPM-L) Length = 729 Score = 29.3 bits (64), Expect = 3.9 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRPRGSSTAA 310 PP SA +GP PP A PG G+ T A Sbjct: 91 PPASAAAPASGPPAPPGLAAGPGPAGGAPTPA 122
>CSKI2_MOUSE (Q8VHK1) Caskin-2| Length = 1201 Score = 29.3 bits (64), Expect = 3.9 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +2 Query: 188 RGLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSS 301 R R G PPP +V+G EPP G G G++ Sbjct: 859 RARRKGPPPPPPKRLSSVSGSTEPPSLDGTSGPKEGAT 896
>Y665_TREPA (O83671) Hypothetical protein TP0665| Length = 251 Score = 29.3 bits (64), Expect = 3.9 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 Query: 112 PMGKKGLTSIFSKLPAGADEPSPPWPWP 195 P K+G T ++ K P G + PPW P Sbjct: 209 PHSKRGRTKLYRKEPPGDNRSPPPWQEP 236
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 29.3 bits (64), Expect = 3.9 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Frame = +2 Query: 182 PGRGLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP-RGSSTAAPG 316 PG + G PP A + GPA PP G PGRP R PG Sbjct: 202 PGEPGQPGPSGPPGPAG--MIGPAGPPGKDGEPGRPGRNGDRGIPG 245 Score = 28.9 bits (63), Expect = 5.2 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = +2 Query: 182 PGRGLRAG----IHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPGKC 322 PG+ R G I P P + +GPA PP G PG P G PG C Sbjct: 949 PGKDGRGGYPGPIGPPGPRGNRGESGPAGPPGQPGLPG-PSG----PPGPC 994
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 29.3 bits (64), Expect = 3.9 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 G+ I P P R GPA PP + G PG P Sbjct: 1111 GIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPP 1143
>CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor| Length = 3137 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 10/54 (18%) Frame = +2 Query: 188 RGLRAGIHRPPPSARKTVAGPAEPPLSAGAPG----------RPRGSSTAAPGK 319 +G + + +P P+ + + GP PP G PG R G APG+ Sbjct: 2214 KGTKGALGQPGPAGEQGMRGPQGPPGQIGTPGIRGEQGIPGPRAGGGQPGAPGE 2267
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 29.3 bits (64), Expect = 3.9 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = +2 Query: 203 GIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAP 313 GI P P +K GP PP S+G PG P G++ AP Sbjct: 1219 GISPPGPRGKK---GPPGPPGSSGPPG-PAGATGRAP 1251
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 29.3 bits (64), Expect = 3.9 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAP 313 PPP+ R+ PA PP P R R S T P Sbjct: 564 PPPARRRRSPSPAPPPPPPPPPPRRRRSPTPPP 596
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 29.3 bits (64), Expect = 3.9 Identities = 22/62 (35%), Positives = 28/62 (45%) Frame = +3 Query: 147 QAPRRRRRAFSALAVAFVPESTDRLLPRGRPSPALQNRRCRQGPRGGREAHPRRHRGNVQ 326 +AP R+R A AV F+P +T L P +N R G EA R RG + Sbjct: 624 KAPPGRKREPPAQAVRFLPWATPGLEGAAVPQTLEKN-------RAGPEAEKRLRRGPEE 676 Query: 327 DG 332 DG Sbjct: 677 DG 678
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 29.3 bits (64), Expect = 3.9 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 G+ I P P R GPA PP + G PG P Sbjct: 1110 GIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPP 1142 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 4/48 (8%) Frame = +2 Query: 185 GRGLRAGIHRPPP---SARKTVAGPAEPPLSAGAPGRP-RGSSTAAPG 316 GRGL I P P + K GP P SAGA G P T PG Sbjct: 715 GRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPG 762
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 5.2 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 GL I P P R +GPA PP G PG P Sbjct: 1146 GLPGPIGPPGPRGRTGDSGPAGPPGPPGPPGPP 1178
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 5.2 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 GL I P P R +GPA PP G PG P Sbjct: 1146 GLPGPIGPPGPRGRTGDSGPAGPPGPPGPPGPP 1178 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Frame = +2 Query: 188 RGLRAGIHRPPPSAR---KTVAGPAEPPLSAGAPGRPRGSSTAAP 313 RGL I P P+ K AGP+ PP GA G P A P Sbjct: 752 RGLTGPIGPPGPAGAPGDKGEAGPSGPPGPTGARGAPGDRGEAGP 796
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 5.2 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 Query: 182 PGRGLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 PGR AG P + GPA PP + GAPG P Sbjct: 1013 PGRDGAAG-----PKGDRGETGPAGPPGAPGAPGAP 1043
>TIP60_DROME (Q960X4) Histone acetyltransferase Tip60 (EC 2.3.1.48)| Length = 541 Score = 28.9 bits (63), Expect = 5.2 Identities = 16/45 (35%), Positives = 18/45 (40%) Frame = +2 Query: 182 PGRGLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 PG G A I + P A +V PA P S PG P G Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAPPGTPSSGGELVNG 163
>CO2A1_CHICK (P02460) Collagen alpha-1(II) chain precursor (Fragment)| Length = 369 Score = 28.9 bits (63), Expect = 5.2 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 G+ I P P R GPA PP + G PG P Sbjct: 61 GMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPP 93
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +2 Query: 221 PSARKTVAGPAEPPLSAGAPGR 286 PS AGP PP SAGAPG+ Sbjct: 1131 PSGASGPAGPRGPPGSAGAPGK 1152 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/33 (45%), Positives = 15/33 (45%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 GL I P P R AGP PP G PG P Sbjct: 1157 GLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPP 1189
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +2 Query: 212 RPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAP 313 +P P R GP PP G PG P AP Sbjct: 57 KPCPQGRPGPPGPIGPPGEPGTPGNPGAPGNDAP 90
>RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)| (Foocen) (Glut4 vesicle 20 kDa protein) Length = 1163 Score = 28.9 bits (63), Expect = 5.2 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRPRGSST 304 PPP+ +A PA PP + AP R RGS + Sbjct: 143 PPPAGASPLAEPAAPPSTPAAPKR-RGSGS 171
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 28.9 bits (63), Expect = 5.2 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 G+ I P P R GP PP S G PG P Sbjct: 1151 GIPGPIGPPGPRGRSGETGPVGPPGSPGPPGPP 1183 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 4/48 (8%) Frame = +2 Query: 185 GRGLRAGIHRPPP---SARKTVAGPAEPPLSAGAPGRP-RGSSTAAPG 316 GRGL I P P + K AGP P S GA G P T PG Sbjct: 756 GRGLTGPIGPPGPAGANGEKGEAGPPGPSGSTGARGAPGEPGETGPPG 803
>KCNT1_MOUSE (Q6ZPR4) Potassium channel subfamily T member 1| Length = 1224 Score = 28.9 bits (63), Expect = 5.2 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +2 Query: 197 RAGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPGK 319 RA + R P + AGP + P A AP P G S P + Sbjct: 3 RAKLPRSPSEGK---AGPGDTPAGAAAPEEPHGLSPLLPAR 40
>GP153_HUMAN (Q6NV75) Probable G-protein coupled receptor 153 (G-protein coupled| receptor PGR1) Length = 609 Score = 28.9 bits (63), Expect = 5.2 Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 5/83 (6%) Frame = +3 Query: 84 IPSFEPCGGSNGQ--ERSHLHLLQAPRRRRRAFSALAVAFVPESTDRLLPRGRPSPALQN 257 +P+F P GS +HL L P RRR + A A P R S L+ Sbjct: 408 LPAFLPRWGSGEDLAALAHLVLPAGPERRRASLLAFAEDAPPSRARRRSAESLLS--LRP 465 Query: 258 RRCRQGPRGGREA---HPRRHRG 317 GPRG R++ PRR G Sbjct: 466 SALDSGPRGARDSPPGSPRRRPG 488
>XRCC1_MOUSE (Q60596) DNA-repair protein XRCC1 (X-ray repair cross-complementing| protein 1) Length = 631 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 212 RPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 RP P A+ AGP+ PP P P+ + +PG Sbjct: 432 RPQPKAKTQAAGPSSPP----RPPTPKETKAPSPG 462 Score = 28.9 bits (63), Expect = 5.2 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +2 Query: 227 ARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 +R A PA P PG+PRG T G Sbjct: 279 SRTPAAAPASTPAQRAVPGKPRGEGTEPRG 308
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 270 QGPRGGREAHPRRHRGNVQDGQ 335 +GPRG RE PRR R +V D Q Sbjct: 465 RGPRGDREDRPRRERRDVGDMQ 486
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 270 QGPRGGREAHPRRHRGNVQDGQ 335 +GPRG RE PRR R +V D Q Sbjct: 465 RGPRGDREDRPRRERRDVGDMQ 486
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 270 QGPRGGREAHPRRHRGNVQDGQ 335 +GPRG RE PRR R +V D Q Sbjct: 465 RGPRGDREDRPRRERRDVGDMQ 486
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 270 QGPRGGREAHPRRHRGNVQDGQ 335 +GPRG RE PRR R +V D Q Sbjct: 465 RGPRGDREDRPRRERRDVGDMQ 486
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/62 (33%), Positives = 28/62 (45%) Frame = +3 Query: 147 QAPRRRRRAFSALAVAFVPESTDRLLPRGRPSPALQNRRCRQGPRGGREAHPRRHRGNVQ 326 +AP R+R A AV F+P +T + P +N R G EA R RG + Sbjct: 629 KAPSARKREPPAQAVRFLPWATPGVEDSVLPQTLEKN-------RAGPEAEKRLRRGPEE 681 Query: 327 DG 332 DG Sbjct: 682 DG 683
>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV) (Restin) (Related to endostatin)] Length = 1388 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Frame = +2 Query: 215 PPPSARK--TVAGPAEPPLSAGAPGRPRGSSTAAPG 316 P P+ +K TV GP PP + G PG P PG Sbjct: 1061 PGPAGQKGETVVGPQGPPGAPGLPGPPGFGRPGDPG 1096
>BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 precursor| Length = 1572 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = +2 Query: 221 PSARKTVAGPAEPPLS--AGAPGRPRGSSTAAPG 316 P +++ P +P S AG+PGR RG T PG Sbjct: 750 PKEVLSLSSPGKPATSGAAGSPGRGRGPGTVPPG 783
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 7/40 (17%) Frame = +2 Query: 218 PPSARKTVAGPAEPPLSAGAPGRP-------RGSSTAAPG 316 PP + GP PP GAPG P R + AAPG Sbjct: 139 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPG 178 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Frame = +2 Query: 182 PGR-GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 PGR G A P P AG A P AG PG P S PG Sbjct: 168 PGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPG 213
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/33 (45%), Positives = 15/33 (45%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 GL I P P R AGP PP G PG P Sbjct: 1153 GLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPP 1185 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRP 289 P P + GPA PP + GAPG P Sbjct: 1026 PGPKGDRGETGPAGPPGAPGAPGAP 1050
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +2 Query: 179 RPGRGLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAP 313 RPG+ + P PS R GP GAPG+P ST P Sbjct: 192 RPGQSGQRSRGLPGPSGRPGPQGP------PGAPGQPGSGSTPGP 230
>YT41_CAEEL (Q11069) Hypothetical protein B0416.1 in chromosome X| Length = 1203 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 6/77 (7%) Frame = -3 Query: 239 RSSSRKEAVCGF----RXXXXXXXXXXXSAPAGSLEKMEV--RPFLPIGTPTRLERRDYR 78 R S + A+ F + +AP+ S ++E+ P TP R+E++ Sbjct: 964 RDMSYRTAIQSFDQNSQSASASSSKSTTTAPSNSEMRIEITENPLHTYITPLRIEKKSSA 1023 Query: 77 ETNESRKEMSSSVERES 27 ++ S + SSS+E+++ Sbjct: 1024 SSSSSSHQPSSSIEKQA 1040
>LIX1L_RAT (Q5PQQ7) LIX1-like protein| Length = 338 Score = 28.5 bits (62), Expect = 6.7 Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 10/44 (22%) Frame = +2 Query: 188 RGLRAGIHRPPPSARKTVAGP-------AEPP---LSAGAPGRP 289 R LR G+ P SA AGP A PP L AGAPG P Sbjct: 22 RALRPGVTGAPTSAATPPAGPPPAPPPPAPPPPPLLLAGAPGLP 65
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +2 Query: 203 GIHRPPPSARKTVAGPAEPPLSAGAPGRPR--GSSTAAPG 316 G+ PP R V GP PP G PG P G++ A PG Sbjct: 1061 GLPGPPGFGRPGVPGPPGPP---GPPGPPAILGAAVALPG 1097
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +2 Query: 197 RAGIHR--PPPSARKTVAGPAEP-PLSAGAPGRPRGSSTAAPG 316 R+G R PPP A + +GP P + GAPG P AAPG Sbjct: 537 RSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTP-----AAPG 574 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +2 Query: 197 RAGIHR--PPPSARKTVAGPAEP-PLSAGAPGRPRGSSTAAPG 316 R+G R PPP A + +GP P + GAPG P AAPG Sbjct: 412 RSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTP-----AAPG 449 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +2 Query: 197 RAGIHR--PPPSARKTVAGPAEP-PLSAGAPGRPRGSSTAAPG 316 R+G R PPP A + +GP P + GAPG P AAPG Sbjct: 287 RSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTP-----AAPG 324 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +2 Query: 197 RAGIHR--PPPSARKTVAGPAEP-PLSAGAPGRPRGSSTAAPG 316 R+G R PPP A + +GP P + GAPG P AAPG Sbjct: 162 RSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTP-----AAPG 199
>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor| (PRP-1/PRP-2) (Parotid proline-rich protein 1/2) (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa) (Parotid isoelectric focusing variant protein) (PIF-S) (Parotid double-band Length = 166 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/37 (40%), Positives = 15/37 (40%) Frame = +2 Query: 203 GIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAP 313 G H PPP R P PP G P PRG P Sbjct: 98 GGHPPPPQGR-----PQGPPQQGGHPRPPRGRPQGPP 129
>HCN3_HUMAN (Q9P1Z3) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 3 Length = 774 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 11/57 (19%) Frame = +2 Query: 182 PGRGLRAGIHR----------PPPSARKTVAGPAEPPLSAGAPGRP-RGSSTAAPGK 319 P R L A + R PPP GP PLSA P P R + +PG+ Sbjct: 675 PARTLHASLSRAGRSQVSLLGPPPGGGGRRLGPRGRPLSASQPSLPQRATGDGSPGR 731
>Y3215_MYCBO (Q7TX22) UPF0182 protein Mb3215c| Length = 992 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPGK 319 PPP A +GP PP++A AP P G+ T +P K Sbjct: 919 PPPPA----SGPQPPPVTA-APPVPVGAVTLSPAK 948
>Y3193_MYCTU (O53339) UPF0182 protein Rv3193c/MT3285| Length = 992 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPGK 319 PPP A +GP PP++A AP P G+ T +P K Sbjct: 919 PPPPA----SGPQPPPVTA-APPVPVGAVTLSPAK 948
>VCO7_ADE05 (P68951) Major core protein precursor (Protein VII) (pVII)| Length = 198 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 Query: 176 LRPGRGLRAGIHRPPPSARKTVAGPAEPPLSAGAPGR 286 +R R L AGI PP +R+ A A +SA GR Sbjct: 137 MRAARRLAAGIVTVPPRSRRRAAAAAAAAISAMTQGR 173
>VCO7_ADE02 (P68950) Major core protein precursor (Protein VII) (pVII)| Length = 198 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 Query: 176 LRPGRGLRAGIHRPPPSARKTVAGPAEPPLSAGAPGR 286 +R R L AGI PP +R+ A A +SA GR Sbjct: 137 MRAARRLAAGIVTVPPRSRRRAAAAAAAAISAMTQGR 173
>COL13_CAEEL (P20631) Cuticle collagen 13 precursor| Length = 316 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 3/27 (11%) Frame = +2 Query: 245 GPAEPPLS---AGAPGRPRGSSTAAPG 316 GPA PP S AGAPG+P + ++ PG Sbjct: 243 GPAGPPGSPGPAGAPGQPGQAGSSQPG 269
>COL12_CAEEL (P20630) Cuticle collagen 12 precursor| Length = 316 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 3/27 (11%) Frame = +2 Query: 245 GPAEPPLS---AGAPGRPRGSSTAAPG 316 GPA PP S AGAPG+P + ++ PG Sbjct: 243 GPAGPPGSPGPAGAPGQPGQAGSSQPG 269
>CDAN1_HUMAN (Q8IWY9) Codanin-1| Length = 1226 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +3 Query: 156 RRRRRAFSALAVAFVPESTDRLLPRGRPSPA 248 R R+ F + F+ E + R+LP+G P+PA Sbjct: 43 RALRKEFVPFLLNFLREQSSRVLPQGPPTPA 73
>MAML2_HUMAN (Q8IZL2) Mastermind-like protein 2 (Mam-2)| Length = 1153 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +2 Query: 173 LLRPGRGLR-AGIHRPPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAP 313 L++ G+G R AG H + T P PP A P + ++TAAP Sbjct: 79 LVQHGQGARKAGKHTKATATAATTTAPPPPP--AAPPAASQAAATAAP 124
>IF2_GEOSL (Q74CT3) Translation initiation factor IF-2| Length = 883 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +2 Query: 197 RAGIHRPPPSARKTVAGPAEPPLSAGAPG 283 +AG PPP K PAEP A PG Sbjct: 218 KAGTPPPPPRKGKEFVAPAEPERGAKKPG 246
>Y1583_RHOPA (Q6N9G6) UPF0283 membrane protein RPA1583| Length = 369 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSA 271 PPP AR +A AEPP+SA Sbjct: 56 PPPRARVELAREAEPPISA 74
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 28.1 bits (61), Expect = 8.8 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 218 PPSARKTVAGPAEPPLSAGAPGR 286 PP A + GP PP+ AG P R Sbjct: 207 PPQAARAEGGPCVPPVPAGRPWR 229
>VGFR3_MOUSE (P35917) Vascular endothelial growth factor receptor 3 precursor (EC| 2.7.10.1) (VEGFR-3) (Tyrosine-protein kinase receptor FLT4) Length = 1363 Score = 28.1 bits (61), Expect = 8.8 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 Query: 222 LPRGRPSPALQNRRCRQGPRGGR 290 +PRG P P + RR QG +GG+ Sbjct: 1308 IPRGHPDPQGRRRRPTQGAQGGK 1330
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAPG 316 P P + GP+ PP G+PG R APG Sbjct: 362 PGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPG 395
>MUTL_THET8 (Q9RA54) DNA mismatch repair protein mutL| Length = 545 Score = 28.1 bits (61), Expect = 8.8 Identities = 26/91 (28%), Positives = 32/91 (35%), Gaps = 7/91 (7%) Frame = +3 Query: 54 LLPRFVRLPVIPSFEPCGGSNGQERSHLHLLQAPRRRRRAFSALAVAFVPESTDRLLPRG 233 LL R LP + + P G + GQ AL A + T P G Sbjct: 459 LLARLACLPAVKAGHPLGEAQGQ-------------------ALLDALLACETPWACPHG 499 Query: 234 RP-------SPALQNRRCRQGPRGGREAHPR 305 RP ++ R G RGG EA PR Sbjct: 500 RPVLLALKEEDLIRRFGRRSGARGGGEARPR 530
>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)| (CDC2-related protein kinase 5) Length = 1511 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 222 LPRGRPSPALQNRRCRQGPRGGREAHPRR 308 L RG+ P + +R R+GPR G+EA RR Sbjct: 92 LARGKRRPGGRRKR-RRGPRAGQEAEKRR 119
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.1 bits (61), Expect = 8.8 Identities = 21/62 (33%), Positives = 28/62 (45%) Frame = +3 Query: 147 QAPRRRRRAFSALAVAFVPESTDRLLPRGRPSPALQNRRCRQGPRGGREAHPRRHRGNVQ 326 +AP R+R A AV F+P +T + P +N R G EA R RG + Sbjct: 629 KAPSGRKREPPAQAVRFLPWATPGVEDSVLPQTLEKN-------RAGPEAEKRLRRGPEE 681 Query: 327 DG 332 DG Sbjct: 682 DG 683
>NU5C_HORVU (Q32440) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) (Fragment) Length = 705 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 Query: 9 HSITSTTFSLYARAHLLPRFVRLPVIPSF 95 H+ T ++ A LLP F+ LP+I SF Sbjct: 257 HAATMVAAEIFLLARLLPLFISLPLIMSF 285
>NU5C_SORBI (Q33066) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) (Fragment) Length = 702 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 Query: 9 HSITSTTFSLYARAHLLPRFVRLPVIPSF 95 H+ T ++ A LLP F+ LP+I SF Sbjct: 257 HAATMVAAGIFLLARLLPLFISLPLIMSF 285
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +2 Query: 191 GLRAGIHRPPPSARKTVAGPAEPPLSAGAPGRP 289 GL I P P GP+ PP G PGRP Sbjct: 127 GLPGEIGTPGPKGDPGPEGPSGPPGPPGKPGRP 159
>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1497 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 10/54 (18%) Frame = +2 Query: 182 PGRGLRAGIHRPPPSARK----------TVAGPAEPPLSAGAPGRPRGSSTAAP 313 PG R GI P + K TV GP PP + G PG P A P Sbjct: 790 PGTPGRPGIKGEPGAPGKIVTSEGSSMLTVPGPPGPPGAMGPPGPPGAPGPAGP 843
>CAS4_EPHMU (P18503) Short-chain collagen C4 (Fragment)| Length = 366 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +2 Query: 215 PPPSARKTVAGPAEPPLSAGAPGRPRGSSTAAP 313 PPP+ AGP P GAPG P P Sbjct: 30 PPPTCPTCPAGPPGAPGPQGAPGAPGAPGLPGP 62
>HSP1_CHRPI (Q7LZB2) Sperm protamine P1-type (Protamine I-1)| Length = 58 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +3 Query: 228 RGRPSPALQNRRCRQGPRGGREAHPRRHRGNVQDGQ 335 R R + RR R+G RGGR RR G + G+ Sbjct: 5 RNRSRSRSRRRRRRRGGRGGRRGRRRRRHGQRRRGR 40 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.137 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,622,599 Number of Sequences: 219361 Number of extensions: 918328 Number of successful extensions: 5105 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 3908 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5026 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
